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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000243_pilon:538426..543524- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022704 ID=XLOC_022704|Name=XLOC_022704|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5099bp|location=Sequence derived from alignment at sc0000243_pilon:538426..543524- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGCTATCTTTTTCAAATTGGTATGGGTATCTATTTTGATTGGATG
TATAGGTGGGTTTTTCAAAGATGCTGAATCAGCAAATCCGCCAGCAGCAG
CTTACAAATTAAGAATCCCTGATAAAGCTTGGAAAAATTGGGCTCAAAAA
TTTGAGAAGAAATATAAAGATGAAAAAGAGGAAAAAAAACGATTTCAAAT
TTGGAAACAAAATGCAAAATATGCTGTGAATTTCAATCGAAAACAAGATA
AAGAGCCTGGGAACAATAAAATGAAATTGAAGATGAACAAATTTGGTGAT
TTGACAAATGAAGAATACAGGTTTGACTTTGTTGAGATTCAAATTTATGA
AAATTATGACTTATTAAATAATGAGAGCTGCACAGGCCAAAGTTTTCAGT
TCTGCTACATCTGTTGATACCTTTTCGGTAAAAGCTAAGTCGGAGAAAAT
TTTAGTCGGATTTTAGTCGAACAAAATTATTGGTCAGATAAAATTCTAGT
CACCTCCCTGTAACCCCTGCTAAAACCGGCCTTCCTCAAGTCAGGATGAC
CACTCAGAACTAATTCAAATTCCAGGGCTTTTCCAGAAGCGTTTCCTATT
GATAAAAATTCTTAAGATTTTGGGATAGAGTATGTCCCAAAAATAATCTA
CTTATACCCAATGCTTTTCATTTTTCTGAAACCAAGGATTGGAAGACCCA
CCATGGTTGGATCTAACCAAAAGAATAATTCAATTTTACCCTCTTTTGAT
TGGCCAAAACTTCCATTAGTACAATATAAAGTTACAACCGATTCATAAAA
GAGTGAGTGAATCTTTAATCTCCACCCTTTTTCACAGCCCATTAAGCTCT
GCCCCCTGTTCAATATTGCTTCAAACTATAACTCTAAGTCGTTATCAGAG
GTCCCACCATGGTTGGGTCCGAGTTTTTGAAAATTGAGATCTCTGGATTG
CCTCATATCAGCATAGAGCCCTGGAAAACTTGAGTATGAAGAATAGAAAT
CTAAAAATTTTAGTATTTAAGTATTTTTACACCATTTCCAAGTGTATACT
GAAAAAAGACCCACTTTTTCCAAATTTCCAGAATAATCAATAAGTACCAA
ATTTTTATTACAGCATATATTCAAGTATTTTCAAGTTTTTTCCATTATCA
GTGGTCACCCTGGATAAGGTAATCACTACGTTCTCTTTCAGGAAGTGTTT
ACCGTACTTTAATTTTATTTCTTGGTTTTATATAGGAAATTCTACTTGAA
TTCCAAGCTGCAATCCTATGTTCGACCACGTAACATCAAGCAACGTAAAC
CTCAAAGAAAACGCAGGTCAACTACAACAGTAGAAAAAGACTGGAGAGAC
GAAGGAAAAGTTACCCCCGTTAAAGATCAAGGCAGCTGTGGAAGCTGTTG
GGCGTTTTCTACGGTATGAAATTAATATTTTAGGTTCCAAAGGGTGAAAG
AATGCAATTTCAAAATCGTTATCTGTTTTGTTCTCAGGTCATTTTATGTT
TACATGTGAGAGCAGGTTCAAAGATTTGGGGCGCTAGGACGAGACAAAGT
GCACAAGGGGAACTAGAAAACCTTCATTTTTAGGAAGTTTTTGAAGTTAG
TGCTTCTTGGGCGAAAACCCTAGGGTATATAGGCAAGTGAAGAATATAGG
GATGTGCAATCGTTTAGTTCGGAAAGTCAGTTCGGAAAACACCATAATAT
TCTTAAATATATTCCATACCAATGTCTCAATATTTTTACATGGAAAATAT
ATACCTTATAAACTAAAGGAAATAATTTTCGCGGGAACTAATTTTCACGT
TTTTTCGCGTTTTTTTTTCCAAATCCGCAAAAATGAACCCGCTTAAAAAT
TTACGAGCTCGAAGCCGCAAAAATTGATTCCCGCAAAATACAGTGGTGAC
CCCCAGAATGCAGGTCTAGATCATTCTCTCAGATAATTGATTACAAGTCG
CAAGCAAGTTTTAGAAGGCTTTTGATTGATTGAGTTTTTAAAATACTACA
TTTTTTTTTAAATTAAAGCAGATTCGGTCAAATTTTGTATTCTTTTGCAC
CTTAATTTTGCAGTTTTGAGGACTTTGAGAAACGATATTTTTAGGAAATT
ACAGTTACATTGTAGATAAGTCCTTAAAATAGGGTATAGGAAGTTGCGTA
TTTATAAAAGGAATTCCGAGAAAATAATTCGAAACAAATTCGTATTGTGG
TATTTTGCACAGAGCCGATGAATTGACACCAGCATTCTGGGGGTCAAAAG
ATTTAAAAAATTGACGTAAAATAGTTTAGAGGCCCACCAATTCTTAGAAT
CCGTGATATGACCACAAAATTTATGGAGTGAGAAATTTATTTTCTATTTT
AAAGAATAATGTATTTTGTAACTTTTGGGAGAGGGGGAATGCGAGTTAGA
TAGTGGAAAAATGTTTATGGGCCAAAAAGTGGCGTCATAGGCAAAACTGT
AAAGGGCCATTTTAAAAAGGTCGACTTTGCAAAGTCAAAACAAACGGAAA
CAATTGATACCATCTGATAGAGCTAGAAATTCTGAGCAAAAAAATGTATT
ACAACAAGTCCTATACTCAAACGTATCAAGAAATACAGCCCTTTTAAACC
AAAAAAGGGTGATTTAACCAAATTTGACAAAAAATGAGAAAATAGAAATT
GACGGAATCTCAATTGAGACACAAACGAAAAACTTCTAATATATCTTAAT
TTAGTGATGCATTAGGCTCAGAATACAACAATATTATCAAATATTTCGAA
GTGTCATTAAATCTTAATTGGACGGAAAAATTTTGATCAACAAAAGGTAA
CCAAAATAGTCAATAATTCTATGTTTAAAACCTTTGAAATTTATCTTTTA
GTGGACCCTAAAAATCTAAGAAAACTATCTAAAGTAGATTTTTAGAAATC
GAAAAAACATCGACCAGCATTCTGAGGGGCGCTAAAAATATAATTCACTT
TGTGACGTCATTTTAATTCGCAAGAAATGATACTTAAAAGTGTTATTTCG
AGAAAAAAAACATTTGGGAAAGAATCTTAAGATGCATGAATTGTCTTCAG
AACAAACATTTTAGATTTATTTGCAAAGCACAAAAAATGAGATAAAATGT
AAATTTGACCAGCATTATGGGGGTCCACCACCCTAATTGAAAAAGTGCCA
TAAGAGAAAATCGATAACAGATTTCAAAGCAAATAATTTCAGGCTTTTTT
CTTCTGAAACGTGATTTTCAGAAGGTAATCAATGAATAAAAAACGAAAAT
TTTTCTTGGGTAATTAAATTTAGCTAGAACGCGGAATTTAATTCCCGCTA
AAAATTCAGAATCAAGTGAATCACGTAAATTAGGTCCCACAAAATACAAT
TTTTCGATTTTTTTTTTTGGAAAACGAAAATTAGTTCCCAAGAAAATTAG
TTCTTTTAAAAAGGTAAATTTCTTCTTATAAACAGACTGGGACGATTGAA
TCTCATTATGCTATCAAACACGGTCCATTAATTCCATTAAGTGAACAGCA
ACTAGTTGACTGTTCAACAGAAAATAGTGGATGTAATGGCGGTGTTGTTC
AATGGGCATATGATTATGTCAAAGAAAAAACTGATGGACTTGAATCGGGA
TATCAATATCCGTATGAAGCTATTGTAAGTAACTTTCAAATTTCAATACC
AACTTTTTTCATGAATTACTACACTGCCTCGTTCTGAAAACGTTGCTATG
GTAATTAGGCAATTGGTTCTCAAATGAGTTACAATATGGGAAGTGTGTTT
TACAGTGGAACCTCTAATTAGCGGACACCATCGGGGAAAGGGGATAGTGT
CCGCTAATTAGAATTGTCCGCCTTTTAGAAACTTTTGATCTCGGAGCTCC
AAGTTTGAAATTAGGCCATCCCAGGGTGTCGAAAATACAAAATTGGGGTC
TAAAGTACTTATCTGCAGACACTAGGCCATAGAAGAACAAGAGAAAGGTT
ATTAAAACGCAACAATTTAGTTTTTAACAAATAAAAGAAAATCTAGAAAT
ATAACACCAAAATTGAAAATACAATTCGTTGAATGGGTCAAGGGAAAACT
GGAAATTTGTAGAAATAATTTGAATAATAAGACTAATAAGTACTTGAAAT
AAAAATATCTAAAAAATCTTTTTTCGATTTTGGACGTCTGTGACCCGTTT
GATATTCAATGTCCGCTAATTGGAGAGCTAAAATAGGGGTTTTGGCCATT
TCATGCGAAAAATTTGTCCGCTAATTGAGTGTCCGCCTTTTAGAAACTTT
TTTATGAGGATTTGACTAGGAAACGGCCGGGGAAAATGAAATTATCCGCT
AATCAGAGGTGTCCGCCTTTTAGAGTGTCCGTTAATTAGAGGTCTTACTG
TATTTCCAATCTCTGTGAATGACTGACGGAATTACAACAACTCACGGTTT
TAATTATGATTATGATATTCTTTTCTAATACTCTTTTTATTTTTCAGGAC
AATAATTGCAGATATGATCATTCCAAAGCTAAAGTCACAATATCAGGTTA
TGAAGATATTCCCTTTGCGAATGAAACCAAACAAGTCGCTGCTTTAAATG
ACCATGGCCCAATTTCAGTTTGCATTGATGCTGGTCATCTATCATTCCAA
TTTTATTCGAGCGGAGTTTATTATGAACCGAACTGTAATCAAAATTCAAT
CAATCACGCAGTAATTGCTGTCGGCTTTGGTAGTGAAGGTGGTTCTGATT
ATTGGATTATCAAAAATAGGTTAGTTTCGACGATTATATTTGTAAGGCAC
AACATCAACATTTATCCAATCAAAAAGTGCTGACGGCATCCTATTCTTAG
AGACTTACCTTCTGGATTTTTTCCCTAAATTTTTATGCTTGAAAGGCAAA
AGGTTCTGAAATATAATATGGTAGTCCGATTTTTCTTTTGCGCACTCAGC
ATTTAAAACAAAATAATTTGCAACATTTCTCTGCATACCCAAATTCTTTT
GTAATTTGTGTGATGAGTCAACTATCATTTTCAGAATTTTGCATCGGATA
CATTTAAGAGACATTGATTTTAAATTGAGTTCGCTTATCAAAAAAAGGTT
TAAAATTTTTCCCATCTTTTTTTACAGTTGGGGAACTGGCTGGGGTGAC Coding sequence (CDS) from alignment at sc0000243_pilon:538426..543524- >XLOC_022704 ID=XLOC_022704|Name=XLOC_022704|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1962bp|location=Sequence derived from alignment at sc0000243_pilon:538426..543524- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGCTATCTTTTTCAAATTGGTATGGGTATCTATTTTGATTGGATG
TATAGGTGGGTTTTTCAAAGATGCTGAATCAGCAAATCCGCCAGCAGCAG
CTTACAAATTAAGAATCCCTGATAAAGCTTGGAAAAATTGGGCTCAAAAA
TTTGAGAAGAAATATAAAGATGAAAAAGAGGAAAAAAAACGATTTCAAAT
TTGGAAACAAAATGCAAAATATGCTGTGAATTTCAATCGAAAACAAGATA
AAGAGCCTGGGAACAATAAAATGAAATTGAAGATGAACAAATTTGGTGAT
TTGACAAATGAAGAATACAGATGGAAGCTATCTTTTTCAAATTGGTATGG
GTATCTATTTTGATTGGATGTATAGGTGGGTTTTTCAAAGATGCTGAATC
AGCAAATCCGCCAGCAGCAGCTTACAAATTAAGAATCCCTGATAAAGCTT
GGAAAAATTGGGCTCAAAAATTTGAGAAGAAATATAAAGATGAAAAAGAG
GAAAAAAAACGATTTCAAATTTGGAAACAAAATGCAAAATATGCTGTGAA
TTTCAATCGAAAACAAGATAAAGAGCCTGGGAACAATAAAATGAAATTGA
AGATGAACAAATTTGGTGATTTGACAAATGAAGAATACAGGAAATTCTAC
TTGAATTCCAAGCTGCAATCCTATGTTCGACCACGTAACATCAAGCAACG
TAAACCTCAAAGAAAACGCAGGTCAACTACAACAGTAGAAAAAGACTGGA
GAGACGAAGGAAAAGTTACCCCCGTTAAAGATCAAGGCAGCTGTGGAAGC
TGTTGGGCGTTTTCTACGGAAATTCTACTTGAATTCCAAGCTGCAATCCT
ATGTTCGACCACGTAACATCAAGCAACGTAAACCTCAAAGAAAACGCAGG
TCAACTACAACAGTAGAAAAAGACTGGAGAGACGAAGGAAAAGTTACCCC
CGTTAAAGATCAAGGCAGCTGTGGAAGCTGTTGGGCGTTTTCTACGACTG
GGACGATTGAATCTCATTATGCTATCAAACACGGTCCATTAATTCCATTA
AGTGAACAGCAACTAGTTGACTGTTCAACAGAAAATAGTGGATGTAATGG
CGGTGTTGTTCAATGGGCATATGATTATGTCAAAGAAAAAACTGATGGAC
TTGAATCGGGATATCAATATCCGTATGAAGCTATTACTGGGACGATTGAA
TCTCATTATGCTATCAAACACGGTCCATTAATTCCATTAAGTGAACAGCA
ACTAGTTGACTGTTCAACAGAAAATAGTGGATGTAATGGCGGTGTTGTTC
AATGGGCATATGATTATGTCAAAGAAAAAACTGATGGACTTGAATCGGGA
TATCAATATCCGTATGAAGCTATTGACAATAATTGCAGATATGATCATTC
CAAAGCTAAAGTCACAATATCAGGTTATGAAGATATTCCCTTTGCGAATG
AAACCAAACAAGTCGCTGCTTTAAATGACCATGGCCCAATTTCAGTTTGC
ATTGATGCTGGTCATCTATCATTCCAATTTTATTCGAGCGGAGTTTATTA
TGAACCGAACTGTAATCAAAATTCAATCAATCACGCAGTAATTGCTGTCG
GCTTTGGTAGTGAAGGTGGTTCTGATTATTGGATTATCAAAAATAGGACA
ATAATTGCAGATATGATCATTCCAAAGCTAAAGTCACAATATCAGGTTAT
GAAGATATTCCCTTTGCGAATGAAACCAAACAAGTCGCTGCTTTAAATGA
CCATGGCCCAATTTCAGTTTGCATTGATGCTGGTCATCTATCATTCCAAT
TTTATTCGAGCGGAGTTTATTATGAACCGAACTGTAATCAAAATTCAATC
AATCACGCAGTAATTGCTGTCGGCTTTGGTAGTGAAGGTGGTTCTGATTA
TTGGATTATCAAAAATAGTTGGGGAACTGGCTGGGGTGACTTGGGGAACT
GGCTGGGGTGAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000243_pilon | genome | sc0000243_pilon:538426..543524 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 961-981:22 |
| Aaloc | 688-957:653 |
| Aaloc | 499-687:1665 |
| Aaloc | 322-498:3864 |
| Aaloc | 1-318:5100 |
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