XLOC_022660 (mRNA) -

Overview
NameXLOC_022660
Unique NameXLOC_022660
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000260_pilon:220674..221625+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022660 ID=XLOC_022660|Name=XLOC_022660|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=952bp|location=Sequence derived from alignment at sc0000260_pilon:220674..221625+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGCTTGCAAAAGGCGTTGAAATATACAAAATATGTTTGGAACGAAATCC AACTTCACAGAAAACACTGCGTGGTCTTGGAAATCATTATTTTCATAACA AGTGGCTCaaaaaaaaGTCTGaactatttttaaataaaagcctgaaatat ttcactgatcTAGTCTCAGACCCGGCAAATGCAAAGCCATTTGATATCAC TAAATTGGGTTATATTCATCTAGCTGCTTACAAATATTACAAGGAGCTGG GACAAAGTAATAGTTCGAATGGAGGAAAAAATCACCAGAGAGGGGGAAAT CAACGAAAGGTAAAAAGACATCAACAAAAAGCAGAGGAGCACAAAAGTTT AAGCAAAGAGTGGTACGAAAGAGCTGCAGAGGAACTTAAGAAAGGACATC ATGATTTGAGAAGTGACGTTGAAACATGCTTTAGACTCTCAGAATGCTAT AAGGAATTTGAGCCAGAGCGAGAAATATATTACTTAAAGAACACTTTGAT CAAATCCAGTCAAGGAAGCAAAGAAGATGCATTCGGGGAGCTTGATTTCG TTAAGAAAGCAAGAGAAAGATTGTTAGAGGTTGTTACAAATAAGAATGGA GATCCAACAACTATGTTTCAAACGAAAGCATGGGCTTACGAGCAAACCGG TCATTTTGAAAGCGCTTtgttttatttagaaaaagcaaTTAATCTTTGCA GGCGAGGAAATCATCTAGATATGTTCAAAAAGAGCTGAACTATGTTTGGA GATTGTTAAAGATAAACGGAGGCGTGGAATCAATTTCAAGATATCCATGA ATGTTTTGGATGAGCACATTCAACAGCTACCAGACGGTTCTATGAAGCAA TTATTGGTGTACGAAAGCCAAAAGATTAGGATCGAAGAATTAATGTCAAG TGAAGAAGTTCTAGAATGCTTAGAAAAAAGCACAAAGGAATTCGAAGATT TT

Coding sequence (CDS) from alignment at sc0000260_pilon:220674..221625+

>XLOC_022660 ID=XLOC_022660|Name=XLOC_022660|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1904bp|location=Sequence derived from alignment at sc0000260_pilon:220674..221625+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGCTTGCAAAAGGCGTTGAAATATACAAAATATGTTTGGAACGAAATCC
AACTTCACAGAAAACACTGCGTGGTCTTGGAAATCATTATTTTCATAACA
AGTGGCTCaaaaaaaaGTCTGaactatttttaaataaaagcctgaaatat
ttcactgatcTAGTCTCAGACCCGGCAAATGCAAAGCCATTTGATATCAC
TAAATTGGGTTATATTCATCTAGCTGCTTACAAATATTACAAGGAGCTGG
GACAAAGTAATAGTTCGAATGGAGGAAAAAATCACCAGAGAGGGGGAAAT
CAACGAAAGGTAAAAAGACATCAACAAAAAGCAGAGGAGCACAAAAGTTT
AAGCAAAGAGTGGTACGAAAGAGCTGCAGAGGAACTTAAGAAAGGACATC
ATGATTTGAGAAGTGACGTTGAAACATGCTTTAGACTCTCAGAATGCTAT
AAGGAATTTGAGCCAGAGCGAGAAATATATTACTTAAAGAACACTTTGAT
CAAATCCAGTCAAGGAAGCAAAGAAGATGCATTCGGGGAGCTTGATTTCG
TTAAGAAAGCAAGAGAAAGATTGTTAGAGGTTGTTACAAATAAGAATGGA
GATCCAACAACTATGTTTCAAACGAAAGCATGGGCTTACGAGCAAACCGG
TCATTTTGAAAGCGCTTtgttttatttagaaaaagcaaTTAATCTTTGCA
GGCGAGGAAATCATCTAGATATGTTCAAAAAGAGCTGAACTATGTTTGGA
GATTGTTAAAGATAAACGGAGGCGTGGAATCAATTTCAAGATATCCATGA
ATGTTTTGGATGAGCACATTCAACAGCTACCAGACGGTTCTATGAAGCAA
TTATTGGTGTACGAAAGCCAAAAGATTAGGATCGAAGAATTAATGTCAAG
TGAAGAAGTTCTAGAATGCTTAGAAAAAAGCACAAAGGAATTCGAAGATT
TTAAGCTTGCAAAAGGCGTTGAAATATACAAAATATGTTTGGAACGAAAT
CCAACTTCACAGAAAACACTGCGTGGTCTTGGAAATCATTATTTTCATAA
CAAGTGGCTCaaaaaaaaGTCTGaactatttttaaataaaagcctgaaat
atttcactgatcTAGTCTCAGACCCGGCAAATGCAAAGCCATTTGATATC
ACTAAATTGGGTTATATTCATCTAGCTGCTTACAAATATTACAAGGAGCT
GGGACAAAGTAATAGTTCGAATGGAGGAAAAAATCACCAGAGAGGGGGAA
ATCAACGAAAGGTAAAAAGACATCAACAAAAAGCAGAGGAGCACAAAAGT
TTAAGCAAAGAGTGGTACGAAAGAGCTGCAGAGGAACTTAAGAAAGGACA
TCATGATTTGAGAAGTGACGTTGAAACATGCTTTAGACTCTCAGAATGCT
ATAAGGAATTTGAGCCAGAGCGAGAAATATATTACTTAAAGAACACTTTG
ATCAAATCCAGTCAAGGAAGCAAAGAAGATGCATTCGGGGAGCTTGATTT
CGTTAAGAAAGCAAGAGAAAGATTGTTAGAGGTTGTTACAAATAAGAATG
GAGATCCAACAACTATGTTTCAAACGAAAGCATGGGCTTACGAGCAAACC
GGTCATTTTGAAAGCGCTTtgttttatttagaaaaagcaaTTAATCTTTG
CAGGCGAGGAAATCATCTAGATATGTTCAAAAAGAGCTGAACTATGTTTG
GAGATTGTTAAAGATAAACGGAGGCGTGGAATCAATTTCAAGATATCCAT
GAATGTTTTGGATGAGCACATTCAACAGCTACCAGACGGTTCTATGAAGC
AATTATTGGTGTACGAAAGCCAAAAGATTAGGATCGAAGAATTAATGTCA
AGTGAAGAAGTTCTAGAATGCTTAGAAAAAAGCACAAAGGAATTCGAAGA
TTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_022660XLOC_022660-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000260_pilongenomesc0000260_pilon:220674..221625 +
Properties
Property NameValue
Aaloc730-954:728
Aaloc1-726:1