|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000260_pilon:200239..203341+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022658 ID=XLOC_022658|Name=XLOC_022658|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3103bp|location=Sequence derived from alignment at sc0000260_pilon:200239..203341+ (Clytia hemisphaerica_ch_hm2_pilon)
ggGCATGTGTACTTGTTTGATTTGCGTCACGGTTCAGTTCCCATCAAAGT
GGTTGCTGCTCACAAAACCTCTGTTCGATCTGTGGCTTTTCAAAGAGTAC
CCAAAGAAAATAAGGTAAATTTTCTTGAACAAAGTTTTTTCTCTCTTGGA
GAAATAAGGAACCTGATTTGTATTTGTCGTACTTGGACAACAATATTTTT
ACATCTGCGCGTtctagaaattatttttatatttatatttttatagtcCC
CTAAGAAGTCTATCGACGAAAGTACAAAAGCTTCGAATCGTCGATTGAGC
TCTTCCAGTGACCCAGAAAACAGCTTTCAAACGCCCGCCTCAGTTGCTGT
CGCCCCGCGCGTCGAGCGTATCGAGCCCAGTATACGCCAAGAAAAATCAT
CCGAGGGTCACATTGGTGTAACGCCAGCTTCACGTGAGAACAGTGCGACC
AGTTTTGGCCATCCACGAGAAAACAGCTCGTCAAACCTACGCAATGGTGA
TCGTTCAGGTATGCGCTAAATCAAATCAATAGTGTTTGTGTATGCAGGAT
TCTTTATTATTCAATAACCTTCTAAGCCGTGTATTTCTTccatttgttta
aaatatcAGTGTTACAATTTACTCATCTCAATCCAATGatattaaatttc
taaaaaccaAGTCACTCCACTATTATATGGTAGATAGGGTGTGTTAGTAC
GGACTTCATTTGCGTTAAGCTACCATACCATTCTATATAACCAAGTTATA
CAAAACACAAAACTAATGCCCTACTGCCAGTAAAATTGAACAGCCTGATG
TCGCTATCTGTCTACCAATAATTTTACCCTTTAGCTTGTAGTCGATATTT
TACAGGTTTTTAGAAACTTTTAGATGGACTTTCGATTGTTTtaacggggt
ccacggccagccttCTCGGCTGTCTATGAGCTGAACGTTACATTGGAAGG
AGCGTGTATTCAGATAGAGGGAAAGATTTCAACTCTGACCACTCAGCCAT
CGCACCTCAGTCTAGTTGATAGAGGGAAAAAGTGAACAACATTCATTAAG
CATCCTTAAGTAGCCTCCTTTCTTTCCTGTAAGGATATGTTTCATTGGAT
GTTTTAAATTCCAATATATATTGCGTTTGTTGTCTTGTGTTTTAAAGAAA
GTACTAGCTTATGTTAGTAACTACATTTTGCTCCTTTTATCTGTTGgcat
agtctagcaagctagacgactaatttagacataatagaaataaagcaaaa
agtaatagagggaacaattttagttttttagtttatacaaactaaaaccc
gtaacaataatcgtattatcatataacgcctatactactgtattacatgc
attataaacgactccagtctactctTGGCGTTGTTTActtagcaaaaatt
ttcaatcacAATTTGTAATATCTCCCACGTGTACGTGCAAGGTACTTTAA
AAGATTAATGATTACGATAGCAAGTAATTAATATTGATTAGATAGTTTGA
AGTTGTTACTGTTATTACATgacttcaaagaaaatattgatatttttaag
tGGTATTGTATTATCATGCTATGGtatattttttgctaaaaggtGGATGG
AAGTTTATGACGTCTCTTCTTTCGTGTCTACATATTGTTCCTAGGGTTAA
TTTTTATATGCGTTGCCAGCTTTATAGACTTTTTATTAGTTTGGTTCTTT
TGGATACACCCTAACGCCCCTAAGTTGGAGTTTACCGGGGTTAAACTACT
TCAAATACATTTGTCATCGTAACTGCTTTTGGTCGTCTCCATCTCGAGGG
AGATTTTGGAATTGTTATGGGTAAATATGCTACTTGTTGAGGAGTGTGTC
ATCTAGTAAAGTCAATTCATCTTTCAGTTTTTTAGAATCGCTGGTAGATA
TTGATCAGTAGGCAAGTATGACCAATTatcacatttttcaaagataacGG
GCACTAATTTTCTGCTATGAAGCACTATCACTATTGTTAGAGCTAATCTG
GTATTTTGCTTATATATGCCACTGTTGCGTCGAGTCTTAAAATATAAGTC
ATTGGAGGAATAAAGTTGTTGATTTTTGTTTGCCAGCCATTGAACCTTTA
TGATTCCAGAGGAAGCACCTTTAAGTGTCATCCCATCTAAAGTTGCAAAG
CTATTGGGCAATGATGTCTTTTTGCCTGACTCTCCGGTATTAGAAACTTT
TAGATACATTTTAGGCTTCCGTAGGAATCAATAGTGTATCTGAAGTTTTG
TTTCCTTTTCATGTATTTAGCACAGTTTTTATCATCATTTCAAAATTCTA
TTCTTCAGATAGATAGTTAGTTTAACTAGTTTTTTGTTAGAAATTCCTAA
AACCTTTACCCGAGTTTAACCTTGACTTGAAAAAGCTGTATCAAGTATTT
TCTATGACCCCTATCAACTATTTATTAACTTAACTTCAAATGGCTTGAAG
TCATTCATTTCGGGAAATTGCATATAATGATAGTGCATTTTTAGCGTTGT
CGAATTCTGCCACGTTGTCAAATACCGTAACCTTTCCGCTGTAAAACTTG
ATAACTCTTGTCTTTGAACCAAAAACGGGGTTGCATGGTGACGAAAGGgg
gtctcaaaataatttgtatTTTGTAGACCAATCCAAAAGTAAAACTTTAC
ACCCTAGGATTTTAATTCCACACAGGgatttttccccaattttttacAAT
ACCCTTGGCAGTAAAGGCTACTTTATTCCAAAAAGCCCAAAAGTTTGTTC
AAAAGAGCgaaattttgcctgattttgctTGTAGTTTTAAGAAAATGCTC
GGCTATCTAGAGTTCTCAATCAAAGACTTCGATTGGAAGCGTTGCGTAGA
ATATCAGCGCACCACGTATAGAAGCGCTTCGAAAAACCGCAACGTTGCAG
AATTTTGCAGTGCTGTCATTATATGTGTTATTATAAACACAGAACTTTGA
CGTCATCCTTTCTAGTAAACTGGACCCAAGCCCTTTATGGTGTTTAGGGT
TAACAAGTTTAAACTGAATTTTACATTTTGCCTTACAGTTGATCGACCTC
ACAGCATGTATGACGTACGAATGATGACACCACCGTCTCGTGAGAACAGT
GCA Coding sequence (CDS) from alignment at sc0000260_pilon:200239..203341+ >XLOC_022658 ID=XLOC_022658|Name=XLOC_022658|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=882bp|location=Sequence derived from alignment at sc0000260_pilon:200239..203341+ (Clytia hemisphaerica_ch_hm2_pilon)
ggGCATGTGTACTTGTTTGATTTGCGTCACGGTTCAGTTCCCATCAAAGT
GGTTGCTGCTCACAAAACCTCTGTTCGATCTGTGGCTTTTCAAAGAGTAC
CCAAAGAAAATAAGggGCATGTGTACTTGTTTGATTTGCGTCACGGTTCA
GTTCCCATCAAAGTGGTTGCTGCTCACAAAACCTCTGTTCGATCTGTGGC
TTTTCAAAGAGTACCCAAAGAAAATAAGtcCCCTAAGAAGTCTATCGACG
AAAGTACAAAAGCTTCGAATCGTCGATTGAGCTCTTCCAGTGACCCAGAA
AACAGCTTTCAAACGCCCGCCTCAGTTGCTGTCGCCCCGCGCGTCGAGCG
TATCGAGCCCAGTATACGCCAAGAAAAATCATCCGAGGGTCACATTGGTG
TAACGCCAGCTTCACGTGAGAACAGTGCGACCAGTTTTGGCCATCCACGA
GAAAACAGCTCGTCAAACCTACGCAATGGTGATCGTTCAGtcCCCTAAGA
AGTCTATCGACGAAAGTACAAAAGCTTCGAATCGTCGATTGAGCTCTTCC
AGTGACCCAGAAAACAGCTTTCAAACGCCCGCCTCAGTTGCTGTCGCCCC
GCGCGTCGAGCGTATCGAGCCCAGTATACGCCAAGAAAAATCATCCGAGG
GTCACATTGGTGTAACGCCAGCTTCACGTGAGAACAGTGCGACCAGTTTT
GGCCATCCACGAGAAAACAGCTCGTCAAACCTACGCAATGGTGATCGTTC
AGTTGATCGACCTCACAGCATGTATGACGTACGAATGATGACACCACCGT
CTCGTGAGAACAGTGCATTGATCGACCTCACAGCATGTATGACGTACGAA
TGATGACACCACCGTCTCGTGAGAACAGTGCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000260_pilon | genome | sc0000260_pilon:200239..203341 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 379-441:3041 |
| Aaloc | 115-375:247 |
| Aaloc | 1-114:1 |
|
