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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000260_pilon:210650..218121+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022655 ID=XLOC_022655|Name=XLOC_022655|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7472bp|location=Sequence derived from alignment at sc0000260_pilon:210650..218121+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGAAATCAAAGCAGTACCACTTGGAGCAGGGCAAGATGTAGGCCG
CAGTTGCATTGTGGTCACATTAGGTGGTAAAAACATTATGTTGGATTGTG
GGATGCATATGGGTTACCAAGACAACAGGAAATTCCCTGATTTCACTTAC
CTGGCGAAAAGTGGACCGTACACACCTTACATAGACTGTCTTATCATCTC
ACATTTTCATTTGGGTAAGTTTCATTCATTAAAAATTCTCATATCGTAAT
AATAGACGATaccggcttaacgtgaaaactcagatttgatccccgaatat
tgcccacaatgctttgtgcggaaaaaaattcaccgtgaacttttttccgg
gcaaagcattgtgggcaatattcggggatcaaatctgagttttcacgtta
agccgatatcgtctattagaaCAAATGCCTCCTTTCTTACTCTGTGTATC
ttacgtttatcgcttcgtagtacaatCTGTGCACATCgcctgtttgataa
aaaaatcacgTACGGACACTTCTGCGACGaggtatgatttataaatagca
acacttctctcatcgtctcccctctctcatcgtctcccctctctcatcgt
ctcccctctctcaccaacactccatcgcagcggtcggtttgaaaaatttc
aaatgagaaaagacaatgacaacagaccctctagggcaatgaatattgaa
attagccgtagaatcgggtttgtgtacagacaacccCTTTCTTTGACATC
GGTATAGAAATTGTCGAATGTTTTCTGAAACCTCCTCTAGAAACGACATT
TCTCATTTCTCCAACAGATCACTGTGGTGCGCTACCTTATTTTACTGAGA
TGTGTGGTTACGATGGCCCTATCTACATGACGCACCCAACCAAAGCCATA
TGTCCAATCCTATTGGAAGATTTCCGTAAGATTCAAGTGGAGCGGAAAGG
CGATTCACATTTTTTCACATCACAGAATATTAAAGATTGCATGAAAAAAG
TTGTACCTGTTAATTTACACCAAGTGGTGCAGGTTTGTTTTAATCATTTA
CTCGAGTGAAGTAggggggggggACCCTTAGGACCCGTGACATCTTTATA
CCACTCAACCAAACCTGGtccatttcaaagaatgaagAGGGGGTGAGATT
TGCTAAAAGGCCTAGGAAAGTTTTTTAGGACtcaaaaactgacgtcacag
gCAAAATCCCTTGACCCTTGAAATTTCACGAAATTTCAAagtcgcataaa
agatgtcagGCAACCTAAGGGTTTGcccccccccTACTATTGATTTCGTT
TTTGCCAGAAACAAATACTTGTGGTGATAGGGCcgtttgaaagtaatttt
tgaaactgtGATGGCTTTTTTGCGAGTACCATTTTCAGAAATACTTCGAT
CAAAGGTGGTGGACATAGCTAAGTCTAATTATGAATGTCAGTGCATGCAA
TGTTTTTCCAGATGTCGATTTTGTAGCTTCCCTAGAAAGACAGGTTTCTT
AAAGTTACAGAAATTTCTCCGGTGGTCAGATGCTTTCCCTATGTAATAtt
cctttttttgttgaaagtacCCTCTCCAAACTTGATATTCAGTTTATTAT
TTAGCAAATACAACTTGAATACCAACCTAGTAGGGCTTAGAAATCTCTCT
TAGAACCGTCAAAATCTAATAATTTTGGTTGACCACGCTCATATTTACAC
GATGtaaatttatgtttatttatgataatttatgcACACTAGGTTGACGA
CGAGTTAGAAATCAAAGCATATTATGCTGGTCACGTGATCGGAGCAGCCA
TGTTTCATTGTCGCGTTGGCGACCaatcatttgtttataccggtatgtag
agtttttgaatttcaaagtcTTAGTCGGTTCGTTTTTGGCTTTTAAGTGG
GCTTCCTAAAGGCCAATCTCCACTTAAGCGCGAAATGGgcaacagttttt
ttcttaatcctttttgcctgaagaaaagattacgtcataaaaaaagtttc
gcgcgaacaaaaaaaaattgtaggaagttctacttttttcatccgttacg
tcaatttcgaccaatggaatagcttcatttttcaaccgaccaatgacctt
acaaaaacgtcaaaaagttttcgctcatgctgcgcgaaagtggagaccgg
ccttaaggcACTATCCAccttcaagttttttttcataCCGCAGAAAGGAA
TTCTGCATCAAAGAtcttgtttttgaataagagtgacACCGGACTGATAC
AAGACAtgtgaaacgggaacacttattaaaaaattaaaacctttaaaata
ttttaatatttaagGATGATCGGTATGATTGTTCAGTAAGGCTAACTTTT
AAAGTTTGCCGGAAGAGTTTTATCACTTCTTTTTGTGAATTAACCAGAGA
AAATTATCTGCTTCAATATATGAaaataaatacagttgacgatttctaat
tcgacattctactaatcgatacgctccattattcgataattaTTGAAAGT
CAAGCCAAAgccatcaacaagaaactctcataaacggcTCTCCACTATTT
GACACGCTCTCTTATACATTTCATTTCTTCAGGTGATTACAACATGACTC
CGGACAGGCATTTAGGAGCCGCTTGGATCGATAAATGTCGACCGGATCTT
TTGATCACAGAGTCTACATATGCCACAACTATACGAGATTCGAAAAGGTG
TCGCGAAATGGATTTCCTaaaaaaaGTTCACGAAACCATTTTGAAGGGCG
GTAAGGTAAGAATACAtttttttGAGGCGTGTTGAAACCGTCATGAAAGG
CGGTAAggtaaaaaaagcatttttcgaGGGCGTGCTGAAACCATCATGAA
GGGCGATAAGGTAAgaaagattctttttttttggggggggcgTGTTGAAA
CCGTCATTGAGAGCGGTAAAGTAATAAAATAGTAATTTCCGTGGGGCGTG
TTGAAACTGTCATGGAAGGCGGTAAGGtaagaaagcattttttgagggCG
TGTTGAAACCATCATGGAGGGCAGTAACgtaaaaaagcatttttcgaGGG
CGTGTTGAAACCATCATGAAGGGCGGTGAAGTgagaaagcattttttgag
ggTGTGTTGAAACCATCATGAAAGGGCGGTAAAGTAAGAAAGCTTTTTTG
GGGGGCGTGTTGAAACCATCATGAAAGGGTGGTAAGGTAATAAAGCAATA
ATTTCTGTGGGGCGTGTTGAAAACGTCATGGAGGGCGGTAAGGTAATAAA
GCGGTAACTTCTGTAGGGCGTGTTGTATTTCTACCACTCAAATTTTTTCG
AAGaagaatttaaaactttttatccGTCTGTTTgcgtttatttaaaaaaa
aaaaggctTTTACATACGCCATTGTTTCTGGAAGTTTTACATTTGACCTT
CGAATTTCTGtgaaatttcagtaaaaaaattatatcattgcCTAGAAGGT
TAGTGGTACGGGTAGACCCCGTACgcgttttttttgtaagaacaaactac
ataagaacataagagcATTAAAAACAGGTTAAAAACTcgatgttaagaac
atttcaagaaattATTTTAGGCTTAATACTCAAAAGGTTAAGAGATGaaa
ggcccccagcggtttgcgtgaatgcgtgaattggaaagctttgcgtgaac
aaaaattgcgtgaacaaaaattgcgtgagttgcgaaaaaacattgcgtgg
gtgcgtgaatttgggaaaaacatttgcgtgattgcgtgaatttaAGGCCC
GCTGGGGGACCTCGTAAAAgacttggatgttcttataaaaaggtgTACCT
CAGGATTGACTTGTACTTCAATTATGTTTAATTATATTAAAGGGGACTTC
GTGCAAAGAGTTAatgtaaaattttaatcaaaaatggGAAAGAccctaat
tcatgatatgcaccattgcaatgtcttctacagacccaacagctgattgg
ttgaaagtgatgtatcgactgattttacgtcgcttacaaccaatcagcta
ttgggtccatgatgtaatgtcagaagacattgcaattgtgcatatcatga
atattttacCGCTATTTTCTGGTGTGCTGGTCTTTTGCGGTATTTGACCG
AATCATTCTCTGCGGGAAATTCGTTAATATTTAAGAGCTATTCAATCTCT
CAACAACGGGGAAAGTCCCTAACTTTTCATAAGGAATTTCCGAGTGAATT
TCACCTGGTGAATTCACGATTATTCAAAGGATTGCAAATTTCCTTTAgcc
aaatttatattttgttgaTGTCATTCTGTCAAGTAaatggtattcatgat
atgtatgacgtaatgttttatacggaagcataaaaaaaGAACGGGTGTTT
GCTAACAATTCTGACTTAAAagtctttgtttttaaataagagtgacatcg
tttgctcactcgtcaattttaatttacaagctttttgaattttattgaat
tttgacaCGGATGAATATTATGAAATTAAATTATTGTGTTGTTGATTTTA
ATATATTATTTATAAAAGACAATTGAATTCGGAGAAATTCACACTGTTTG
TTTGGTATCCATGGCAACCATTTAGAGATTGTATACGATCACCAGTATGG
TACGGTagataattttttgtttgttacgTATATTTCCCTTTTTACAGTAT
TAAATAccctaaaaaaattatatattttctcactctaaaatttagatttt
tttgtgcTGAACTATTACTCCAATTACGATTTCtgaaggtaattattttt
atttcatttttatttccgttacttttaaggttgagttaaaggttttgttt
tgattgaaaggtccgacgatgctgatgtagtaaaaacaaatGCGACAAGa
atagaaaaaggtttttgaaaaaaatgataatacattgaataaaaaaatat
tcgatCATTCAAGTCgatatcgttgcgtaaaaatatagctttaatttatc
tgactcagcatgaagacactgcctaaaataagctccttttattctcgtag
aaaacctttaaagatTAGATGACATCACTTCAGAAAATTGTCACCATTTG
TGAAACTTCAAGTTAATACGTGACGTTTCGGAAAACTACAATCTTGCCGA
AAAGCTGATCAAGAgtagaattttgaatttctgaAAGTTGTTacgaagtt
atttttcattataaTATCATCAGTTAATAATTATTTGCCAGTTTTCTTTC
TatgtttttaaaactcaatcGTTTTGTTTCCTTTAGAAATGGCTGAACTA
TCAGAGTTTCATTGTTGTCATTTTACTTGGCAAATCCCGAATCAAAGCTT
ACGAAGAAATCGATTCTTACGGGACCGAATTTACACCATCGAAGAAGAAG
TCAAGTCTCAAAACGAAGGAAAATCAAAGAAACGAAACTATCCACAACTT
TTATCGCTTCAAGCCTTCCTCAACGTCATGTTGTATCGCAACaaaaacga
agatgaagatgaaaatgaagatcgtTTATTGGAAAATGCTGAATCCTGTC
TCAATCAAGCTTTGAAAGAATGTAATTCAATTTCGAAAGAAGACGAAGAC
GAAGCCAATGGCTATCGATTGGTCATCTATGCTGACTTTATTCATTTGCA
TCAATATCAACCAAACGAGAATGTCGAAGATTATAAGGAGGCTTACAATG
ATTTGATAAGTCAGGGTTTGTCAGGCGATGAACATCCGTCAGTGTTGGCC
ATGAAAGGTTTCACTGCCGGTCATTTAGATTTTCTTCAAGATGCAATAAT
GTGGTATCAGAGAGCCTTGGAAACCATGGAAAAAGCTGAATGGTTATTTG
GCTTAGCTCTGGCAAAATTGCAATTGGACTATTGGCGATCAAAACCAACC
AATAATGTGGGGATTCAAAATCTTTTACAACAAGCCATCAAATTGGATCC
AACATATGATATGGCGAGAATCAAACTGGCCAGATGTTTGTTGGATCAGC
ATaaaaaaaGTAACCAGAACGGGGCTCATCTCCCTCAGATGCTGGTAATG
CAGATCAAGGATCTTGTGGATCCAATACAAACCAGTAATGACCATAATGG
AATTGGGTTaaatattttggaagaaatTGGATCTGTATATAGTAGGATGG
ACAACTTTCTTGATAAGGGATTACGACTTTCCAAAGAATGCCGAAGACGG
AATCCTGAATCAATGAAAGCTTTACGTTGCCTTGCAAATGCCTACTTTCA
CAAGTGGAAAAGCTCGAGAAATGAATCTGAATTGAAGAATTCGGTAAAGt
attttagccaaattatttCTGACCTGGAAAATTCGAAAATGTATGACATC
ACAATGTTGGGTGTGGTTCATTTGAATGCATCTAACTTCTATTTGGAGAA
AGATGGAGTAAAAGCTCAACATCACAAAGCCGAATGGAAAATTTGTTTCG
AGAAAGTAGAAGAACTTTTTCACCAAGGCCAACTGGAAGTTAAAGAAGAA
ATCGAGATGTGTCACCGTTTGGCATGGTTCTATAGTGACTTACGAAAACC
TTTGAAAGAAAGGGAATATTGGCAGAAGGTTTTGGATATCAATGACAAAG
CGCTAAGAGAAGGCATTCGAGATTTTCAAGAATCATCATATGTAAAAAAT
GCTCAAGAAAAACTGTCAGAATTCCAATAAGAATGAATGAATTTTATATA
AATTGTCAACcccaaaattttgacaaaatgacacttaaattatgtaaatc
acgataataagcagatattcaataggtaaaagttggttatttagatttat
taaccctcggtgatgtaaTATTACCATGAATATACATCACCgtgggttaa
taaatccaataaccaaccaAAActtattgaatatatgttttattatatac
ctaaaggcaaaaacaaaacattaattatgtCGAACGTTAAAacttaaaac
actcccataatcgaacgttcgaatttttttattaatgattTTCTTGATTA
CTTTAAGTCATGAAATTCGTTCATGAAAtcgacaatagatttattttaat
gaatttctttgatgaacaacaagagcgacaaaaaatcaaactttgaaagc
aaaatttgaaaaaaattctaccgtggtataatagccgtggtatatcagga
attattcaatgactgtttttgcctacaggtatataataatatcaaaaata
tgacGAACTACAGCAATATGAGGGGTTTCCATCGCTACAGAAGTCTAACA
AGAGTTTCAAACCAGGCTCTAGATTTGTATTTTTCCTATTCCGGTGACAT
TAGCGGACCTTAaatgatggccaaaatatttttgaatatcaaAGCTCTTA
GAGAAAGCACTTGGGATACCAACCATAGAAGGCAAGTCATTGATGGAAAT
GTCAAGGTTAAGAAACGAAGCATGAGATTCCGAGTGTTCAACTTTGTGGT
CAAGTTCATCTAAATAGATCTTATGTACAAATTCAATGTTCCCATTATTT
ACAGCACAGAGATCATCAATGA Coding sequence (CDS) from alignment at sc0000260_pilon:210650..218121+ >XLOC_022655 ID=XLOC_022655|Name=XLOC_022655|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1440bp|location=Sequence derived from alignment at sc0000260_pilon:210650..218121+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGAAATCAAAGCAGTACCACTTGGAGCAGGGCAAGATGTAGGCCG
CAGTTGCATTGTGGTCACATTAGGTGGTAAAAACATTATGTTGGATTGTG
GGATGCATATGGGTTACCAAGACAACAGGAAATTCCCTGATTTCACTTAC
CTGGCGAAAAGTGGACCGTACACACCTTACATAGACTGTCTTATCATCTC
ACATTTTCATTTGGATGGCAGAAATCAAAGCAGTACCACTTGGAGCAGGG
CAAGATGTAGGCCGCAGTTGCATTGTGGTCACATTAGGTGGTAAAAACAT
TATGTTGGATTGTGGGATGCATATGGGTTACCAAGACAACAGGAAATTCC
CTGATTTCACTTACCTGGCGAAAAGTGGACCGTACACACCTTACATAGAC
TGTCTTATCATCTCACATTTTCATTTGGATCACTGTGGTGCGCTACCTTA
TTTTACTGAGATGTGTGGTTACGATGGCCCTATCTACATGACGCACCCAA
CCAAAGCCATATGTCCAATCCTATTGGAAGATTTCCGTAAGATTCAAGTG
GAGCGGAAAGGCGATTCACATTTTTTCACATCACAGAATATTAAAGATTG
CATGAAAAAAGTTGTACCTGTTAATTTACACCAAGTGGTGCAGATCACTG
TGGTGCGCTACCTTATTTTACTGAGATGTGTGGTTACGATGGCCCTATCT
ACATGACGCACCCAACCAAAGCCATATGTCCAATCCTATTGGAAGATTTC
CGTAAGATTCAAGTGGAGCGGAAAGGCGATTCACATTTTTTCACATCACA
GAATATTAAAGATTGCATGAAAAAAGTTGTACCTGTTAATTTACACCAAG
TGGTGCAGGTTGACGACGAGTTAGAAATCAAAGCATATTATGCTGGTCAC
GTGATCGGAGCAGCCATGTTTCATTGTCGCGTTGGCGACCaatcatttgt
ttataccgGTTGACGACGAGTTAGAAATCAAAGCATATTATGCTGGTCAC
GTGATCGGAGCAGCCATGTTTCATTGTCGCGTTGGCGACCaatcatttgt
ttataccgGTGATTACAACATGACTCCGGACAGGCATTTAGGAGCCGCTT
GGATCGATAAATGTCGACCGGATCTTTTGATCACAGAGTCTACATATGCC
ACAACTATACGAGATTCGAAAAGGTGTCGCGAAATGGATTTCCTaaaaaa
aGTTCACGAAACCATTTTGAAGGGCGGTAAGGTGATTACAACATGACTCC
GGACAGGCATTTAGGAGCCGCTTGGATCGATAAATGTCGACCGGATCTTT
TGATCACAGAGTCTACATATGCCACAACTATACGAGATTCGAAAAGGTGT
CGCGAAATGGATTTCCTaaaaaaaGTTCACGAAACCATTTTGAAGGGCGG
TAAGCACAGAGATCATCAATGACACAGAGATCATCAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000260_pilon | genome | sc0000260_pilon:210650..218121 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 703-720:7455 |
| Aaloc | 532-702:2585 |
| Aaloc | 430-528:1743 |
| Aaloc | 217-429:820 |
| Aaloc | 1-213:1 |
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