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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000572_pilon:13337..15771- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022585.5 ID=XLOC_022585.5|Name=XLOC_022585.5|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2435bp|location=Sequence derived from alignment at sc0000572_pilon:13337..15771- (Clytia hemisphaerica_ch_hm2_pilon)
TCATTCCCAGCACAAGTGGTTGGAAGATCAAAATACATCGAACAACATTT
GACGCAAACAAGATGTCCCAGTAAGATACCAAAAGGGCAAACCTATGGGG
TTTGTCACATGAAAGACGCTACGAAAGCTGCGTTGGTATGGAATGATCCG
CATCATCCCGCCCAGGATTGGCATTCTCTCGGGAAACACGAGATCAACCA
GATGGAGGACAACATCGTTATACCATCCCTCAGGATTGGAGGATCAATAC
AGAACACGTACGGTGAAACCGACTCGACGTTGCTATTGGATAACGGTCTG
CTACTAAAAGACCCTATCATGAAAGAAAACATGTTCGAAGCACTGAAAAA
TATTGTCACGGACTACGCGAAACGAATGTCATCAGATGTACTTGGTCCCA
TACTACAAGCACACATCATGCGAACCTTGATCAACCAGAAACAAGATATC
ATAGCGGAATGGGAAAGGACGTGCTTCATACAGCAAGAAGTCACGAGAAT
TCAACAATGGATGATTGAAGTATTTCCAACAACAGCCGCGCGATGGATTC
ACCAGGAACGAGGGGTGATGGTACACCTCATTGGTGAGGCAATGCAAGTT
CACAGATGTTTGAAGATCTCGAATTACCGGTTAATAACAAGCCGCAGAAT
AGGAAATTCGTGCTATCATGACATTCCAGTGAAAGCACCTTATCACGAAA
AGATAAAATTCTTGCGACTAATTGACCGCCACGTAGTTGAAAAGTCCCAC
AAGATCAATTGCTCTGAAAGACCACCAGTCACTTATCTCCGAAACGAGGA
AGGATCATACGACGTAATTGACAAGGAAGGAAACATAACCAAGGTGATCC
CAAAGAAACAATTCAAAGGAAGGAACTTCGTGAAACTACCTAAGATAAGA
GGATGGGATCCGAGGATGATACGAAAACCACCACAACATTTGGCACCCTA
CTCTATGCTGAATATATTCTCAGAGATACATGACGCAATGGAAGAGGTGA
AGCAACTTCAAATGCAACATGGGAATGGAGACTTATTAACTGGCATTGGA
GTCGGTTTAGGAGGAATCCTTGAAGGTGCTGCAAGTGGGACTAGTCAAAT
CATTGGAGCACTAGGAAGTGGCATACAAGGAGTGTTAACAGGAGTAGGTA
ACCTAGATGAGAAGATAGTCACTTCCCTAGGTTCAGCGGCTAGCAACATC
ATCACATCAACTGGCGACGCTGTTGAATCTGCCGGAAAAGGATCGGAAAC
CTGTTCAATGTATTTGGAGGAGTCAGTGGTACAATCAAGTGGATTATTAT
TCTATTCCTCATTGCAGGATTTGCGTACTTAAACAGAGATTCGTTAATAA
AGATCTTTAAAAGAAATGTCAAACAGAAATTTACACCCGAAGAAAGCAAA
GCAGGCGAACCAAAACGACTCCATCATGAGGACAATCAAAGAAGACATCG
CGAGAGACGCTCCCATCACAGACATCACCACGCGAGACGATTGATGACGG
AGACTGTCAACAGACAGGAAGACGGAAGTGCAAACGAAGAAGAACCGTCA
CAGAGAGATGTATTCACGTACGTGCATCATAACAAGAAACGTGGACACTC
TCATAAAAACAGAGCAAGGCGAGGACACGTACTTGCGGTGTCAAGCCAAT
CTAAAGGAGATGAAGAAAAGAAACATGGAATCACAACCAGAGTTTACCTG
TCAATAGAAGGTGAGACAAAACCATACATGGCACTAATCGACACTGGATC
AACACACTCACTTCTAAACAAAGATATCTGGGACGCTGCAGAAATAGCAC
CATTTCTAACACACGTTACCGACACAACGTTGAATTCCATAACTGGAGAA
GAAATAGAAACCACAGGAAGTGTAATCATTCCAACGAGCATTGTAGATCC
GAAATCACTAAAGAATCAAAACTTCCTGGTAGTCCCCGGTATCGAAGAAG
AAGCGATAATTGGGACAGACATCTTAAGTGCTGAGAAAGCCATCATCAAT
TTTCAGGAGAAGACCATTACAAGCGGCAACAAGAAAACAATTTTCCAGAA
AAGTAGCAATCGAGAAGGAGTATCAAAATGCTGGATTGGCCTGGGAATTT
TAGCTGCGATAGCGATTACGGCCTTGGGTACCGTTTACGGGTTGACCTTT
ATGAAACAAAATGTACACGAAGGAAAGGAAATTGACGGAAATCTCACACG
AAACTTTGTAGAAGTCCCAACTACCCTCATGATCAAAACCGGAAAAGTAT
TATCAAAATGGACCAAGCACGTGGTTGTGCTTGAATTCCCGCTGCCCAAA
ATACTATACCCTTTCCTGAAGAAGACAGACACGAGAATGGTATTGGGAAT
AATTGTAGGTAGCGGACAAAGGGTTAACGCAACGGAAGAGTTCCAGAGGC
TCAATGCAAAATGCCGTTTGCGGATACTCCATTGA Coding sequence (CDS) from alignment at sc0000572_pilon:13337..15771- >XLOC_022585.5 ID=XLOC_022585.5|Name=XLOC_022585.5|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1506bp|location=Sequence derived from alignment at sc0000572_pilon:13337..15771- (Clytia hemisphaerica_ch_hm2_pilon)
TCATTCCCAGCACAAGTGGTTGGAAGATCAAAATACATCGAACAACATTT
GACGCAAACAAGATGTCCCAGTAAGATACCAAAAGGGCAAACCTATGGGG
TTTGTCACATGAAAGACGCTACGAAAGCTGCGTTGGTATGGAATGATCCG
CATCATCCCGCCCAGGATTGGCATTCTCTCGGGAAACACGAGATCAACCA
GATGGAGGACAACATCGTTATACCATCCCTCAGGATTGGAGGATCAATAC
AGAACACGTACGGTGAAACCGACTCGACGTTGCTATTGGATAACGGTCTG
CTACTAAAAGACCCTATCATGAAAGAAAACATGTTCGAAGCACTGAAAAA
TATTGTCACGGACTACGCGAAACGAATGTCATCAGATGTACTTGGTCCCA
TACTACAAGCACACATCATGCGAACCTTGATCAACCAGAAACAAGATATC
ATAGCGGAATGGGAAAGGACGTGCTTCATACAGCAAGAAGTCACGAGAAT
TCAACAATGGATGATTGAAGTATTTCCAACAACAGCCGCGCGATGGATTC
ACCAGGAACGAGGGGTGATGGTACACCTCATTGGTGAGGCAATGCAAGTT
CACAGATGTTTGAAGATCTCGAATTACCGGTTAATATCATTCCCAGCACA
AGTGGTTGGAAGATCAAAATACATCGAACAACATTTGACGCAAACAAGAT
GTCCCAGTAAGATACCAAAAGGGCAAACCTATGGGGTTTGTCACATGAAA
GACGCTACGAAAGCTGCGTTGGTATGGAATGATCCGCATCATCCCGCCCA
GGATTGGCATTCTCTCGGGAAACACGAGATCAACCAGATGGAGGACAACA
TCGTTATACCATCCCTCAGGATTGGAGGATCAATACAGAACACGTACGGT
GAAACCGACTCGACGTTGCTATTGGATAACGGTCTGCTACTAAAAGACCC
TATCATGAAAGAAAACATGTTCGAAGCACTGAAAAATATTGTCACGGACT
ACGCGAAACGAATGTCATCAGATGTACTTGGTCCCATACTACAAGCACAC
ATCATGCGAACCTTGATCAACCAGAAACAAGATATCATAGCGGAATGGGA
AAGGACGTGCTTCATACAGCAAGAAGTCACGAGAATTCAACAATGGATGA
TTGAAGTATTTCCAACAACAGCCGCGCGATGGATTCACCAGGAACGAGGG
GTGATGGTACACCTCATTGGTGAGGCAATGCAAGTTCACAGATGTTTGAA
GATCTCGAATTACCGGTTAATAAAGAAGACAGACACGAGAATGGTATTGG
GAATAATTGTAGGTAGCGGACAAAGGGTTAACGCAACGGAAGAGTTCCAG
AGGCTCAATGCAAAATGCCGTTTGCGGATACTCCATTGAAAGAAGACAGA
CACGAGAATGGTATTGGGAATAATTGTAGGTAGCGGACAAAGGGTTAACG
CAACGGAAGAGTTCCAGAGGCTCAATGCAAAATGCCGTTTGCGGATACTC
CATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000572_pilon | genome | sc0000572_pilon:13337..15771 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 640-756:118 |
| Aaloc | 4-639:2436 |
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