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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:89664..93825- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022542 ID=XLOC_022542|Name=XLOC_022542|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4162bp|location=Sequence derived from alignment at sc0000228_pilon:89664..93825- (Clytia hemisphaerica_ch_hm2_pilon)
GAACAAAAACCTTTGAAATCGTTGTTAACATTCCGTTGGGAGCCATCTTT
TGGTTTCTATGGAAATATGACTTTTCGAGTCACTGCGTTGTCAAGGGATC
CACATCAAGTGTTTTCGTTAAAGCTGCATAACAACGCAAAATTGCAGGTA
ACAAAAGAAATTGTCTTTTTTCTTTTATCAGCTTTGGAGGACTTGAACAC
CCCTGTTCCACAGCCCCGGCCGAACTTTTTCCCTCAATGGGGATAAAAAT
TCCTATTGAAATCCTAATGGGGATAGAAATTGTATTGTTCCAAGGTTAAA
CAAGACGACTTAAAGTCGAAAATTTCGCATAATACTTGAACATCAACGAC
GAAGACGCATGAAACGTGACTCCTGCAGCATTATGCATTTTGAATGAAGC
GCTACACGAGGTCATAGATACCCTGCTTTTTATGAAAAATCTTAATCCAT
TAAAAAAAGATTCCTTAAAAAATGCGACTAAAGAATTCCATTCTATAAAG
CGTAAACAAAATCTTTCAATTCAGAGAACTGCAATACACACTTGAGAAAA
ATAATTTTAATTTTTTTTGAAAATGAAGAAGAAAAAATGAACTTTTCATT
CTTTGGTGCCAGAAACCTCATTTTGTGCTTTGAAGAACTTGTGATAAAGA
CTTCATTCACTTGCGCAAAGTTTATATCAACTTCTTTCTATAAACAGTAG
AATTTATCTAAAATTGAGAAAAATGGCTAGTCAGAAAAATCTGTTGTATA
CTACTTTCTGATATGAATGATGGCCCACCACCATCAAAATCATTTGACTT
TTCCAGAAAAAAATTGAATATGGGGGGGGGGAGGATATAACATTTTTTGG
AAATTTACCCCCCCTGGACATTGTGACTTTTGATCCCCCGGACAGCAGGT
CTAACCCACCCCGCCCCAGACATCAGTTGAGTAGTTGAGCTCCAGCTTCT
GAACTAAAAAATGGCAGGGTAAAAACTAGCCAACTTTAAGCTTTAAAGAA
ACAATACTCATTGAGATTAAACTTTGACTCCTTTATAACTGCTTTAAACG
GCATCCCATTAAACAAACCCTCCCCAATCTCTTGATGTTTATCCCGTGAA
AAAATAAAGGGGAAAGATTCCAGAAAAGTAACAAGATTCTTAGTGCAGAA
ATGGGAATCTTATACAAACAACTAAACGGTAGCATGATTCAAAATGAAAA
TGCTAATTAGCAAAATGTGTATCAAGATCGGTGAAGTTTGATTGAAGCTT
GATTAGTTTGATTTATTACCTTGTTTCCATTCTTTTTACATTCCAACGGC
TTATTTAGCAGACGCCCACGCTAAAGTTTAAAGAGCAAGCCAATAGACCT
TTTTTCAAAGAGGCCACCCTGTTGAATAATTATGTAGTCCAGCAGAAAAA
CAATGATAAAACTTTGCATAACTATTACAATATGCATGATACAGTAATTA
TGCATGGCTCTATCATTGTTTTTATGGCTGGACTAAATAATTATTCAACA
GGACGTCCTCTTTGAAAAAAGGTCTATATCTTTCATCCCATCAGGGAGGA
AAATCTGGAACTTTTACTAACCAAACTCACCGAACACCAATCAAACTTCA
TTGGATAAAAAACTGTCATCATTAACGAGGGACCGCTGTACATTGTGCGG
TGGTGTACGGTGGGGCTGGATCTAAATGTGATTTGTACGACGGTGAAAAT
AGGTTAATTTGAAATCTGCTGTATTATCTGTACACCCCACCTTACCTTAC
CTTACCTTAAATCACCGTACAATGACAATGTACGGCAGTGTCTATGCAGG
GTCGTTTTGATTATACAAAAATGATTGGGCTCTTCCAGAAAAAAAGCGTC
CATAGGGGGTGGAAGATATATTGTCCAGGGGTAATGAAAAAACCCTGAAA
AACTGCCATGTCCATGGGGTGAATTTGCAATGTCCAGGGGTAAATTTTTG
TGTCCAGGGGGTCGATTTGATGCTTGTCCAGGGGTAAAACACGTGTCCAG
GGGGTGAAAAATCGAAATGTCCAGGGGTGAATCACTGAAAAAATAATATA
TCCTCCACCCCCCATGAACGGTTTTTTTCTGGAAGAGCCCATTGCTGAAT
TTCAATTGACATGATTTCTAAGAAATACTGTGAGATCGGGTAACTTGCAT
AAGCCCTCAAATGAATGACCCATTTGGTCATTAAAATACAAAGTTAAATC
AAAATAAAAATGGTAGGCTAGAGCTGCAAGCGGAGCTGCGTAGTTCATTT
GTTTTGAAATTTTGCTGCTTTGATTGGTCAGTCATTTGATGGCTGTGCAA
GTTACCCTTCACTGAGATGCAAGTCACCCGACTTCACGGTACTTGCTAAA
ACTGACTGTTTGTCACAACTAGTTTCACTATTAACACATAACTATCTGGT
GAAAAAAGGAAAAAAAGATCATACCTGTGCTGTTTGTAGTTTTGGTGAAG
AATAGAAGAGAGGGTTAATAATGTTGTTGTTTGTCCAGTTTGTTGTGGAA
AATTAACTCTTCTTGTACTGCTTACTGAGCATGATCAATTTATTGGTGCA
TTCACTAACTACACAAAATACTTAGTAGTAAACAAATATCAAACCTCTTT
AAATACTCTACAAAAGACCAGAAAATATGATAAAAATTTATACAGCAGCA
GCAAGTTTCAAAAGCATGTCTGATGTGCATAATCAAGCAGCCATTAAAAA
AGGGTCGTGGATAGATTGTAAATGACTCTCCAGGATTTTTTCTACTTTCT
CTATTTCCTATCTCCCATTCTATCCCCTCGTCTTTTCTATTTTCTGACTT
TCTGAGACTTGCTTTCTGATGATTTCTACTAACTTTTCTATATTTCAAAC
TTTCTCCAAAAATCGACCCGACCGGGATTCGAACCCACCAAATGAAAGAA
TCTCTGATCAGAAACCCAGCGCGCTATCCGTTGAGCCACACTCGCACAGC
AGAATACAAAATTTGTAAATACTTATAGAATGACAAAAAAGACGGGGGTA
ATGTTATTGTAATATGGGTAAAAGTACCCCTTTTTTAACCTGACTGAAAT
TCGAGCCGTTACTAGCAACCCTGCGGGGCCCAAGGCGCCGAGTATGCACC
CGGCACAGTGACAAGCCGTTACTAGCAACCATGACCCTACCTAACTGATA
ATAACAGAACCCCCGTCTAAATGGAACCACCATACCCCCGTCTAAACATT
TCCGCAGACTGAAAAAAATTTCGCCTTGGTAGTCATTTACAATATACCCG
ACACCATTAAAAAGTTTCACAATGATTGTTTACAAAGGCTTGGTTACACT
TTTTGCACTAGCGTATTTTATTTATTAAGAAAAGCCCTGTTTTTTATCAC
TTTTTATCTTTGTGAGTGAGTCCACCTTTAGAATATTTGCCGTAGTACGC
CCGCAGCCAAACGCCCACGCCATAATTTGCGCCCCAAAAAATGTCTCGCC
AAAGCGAAATTAAAAATCCAGTGGGGATGGTTTTGAAGTGCAACTTTTAA
ACATTGAATTTCGAGTGGGGATGAAATCAAAGTCGATTTTCCACTAGAGC
TGAAATTCCAGGGTATTCTCCCACCGGGGACGAAATTTTCGCTAAATTTT
CCAGTGGGGCTGGGGTGTTAGCAGCGGGTGTGTGACACAGGGAAGTATTT
GACTGTAGTATGAGCAGACTTCCCAGTAAGAGACTCTTCTTGATATTCGA
CAATGCTAGTCTTTATGTGTTTCATAGATTTAAAAATTTTTACATAATTC
TTGATTCGATTTTGCTGGGGTGTTTTAAATATTATGTGTCTGTCGACAAA
ATTTGCAAAAACTAACTTGTGCGTGAACACTTATAAATGTAGAAACAAAA
CCGAAATACCCTTTTACTATATAACGGAATGTTCGCGTACGGTTCAGAGT
TAATTTCTTTCTACTACTTATTTCTACTTCTTAAAAGTCTGGTTCTACTC
TAAAAGTCTGTCTGTTGTTATACGTCAAAACTTATTGATTTTTCTTCGTC
CAGGGGGATGTTAATCAAATTACGATCCAACAAGTCTGTTCCACAACTCA
TTCTTCCTCGTCCAATGCTTCTGGCAATCTCATCAAATCATCCAATCAAT
GGCTTTTGTTGATAGTGGCTTTGGTGACTCTTGGTACTGCAAGATTTTTT
GCCGTAGTGTAG Coding sequence (CDS) from alignment at sc0000228_pilon:89664..93825- >XLOC_022542 ID=XLOC_022542|Name=XLOC_022542|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=612bp|location=Sequence derived from alignment at sc0000228_pilon:89664..93825- (Clytia hemisphaerica_ch_hm2_pilon)
GAACAAAAACCTTTGAAATCGTTGTTAACATTCCGTTGGGAGCCATCTTT
TGGTTTCTATGGAAATATGACTTTTCGAGTCACTGCGTTGTCAAGGGATC
CACATCAAGTGTTTTCGTTAAAGCTGCATAACAACGCAAAATTGCAGGAA
CAAAAACCTTTGAAATCGTTGTTAACATTCCGTTGGGAGCCATCTTTTGG
TTTCTATGGAAATATGACTTTTCGAGTCACTGCGTTGTCAAGGGATCCAC
ATCAAGTGTTTTCGTTAAAGCTGCATAACAACGCAAAATTGCAGGGGGAT
GTTAATCAAATTACGATCCAACAAGTCTGTTCCACAACTCATTCTTCCTC
GTCCAATGCTTCTGGCAATCTCATCAAATCATCCAATCAATGGCTTTTGT
TGATAGTGGCTTTGGTGACTCTTGGTACTGCAAGATTTTTTGCCGTAGTG
TAGGGGGATGTTAATCAAATTACGATCCAACAAGTCTGTTCCACAACTCA
TTCTTCCTCGTCCAATGCTTCTGGCAATCTCATCAAATCATCCAATCAAT
GGCTTTTGTTGATAGTGGCTTTGGTGACTCTTGGTACTGCAAGATTTTTT
GCCGTAGTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:89664..93825 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 499-657:160 |
| Aaloc | 352-498:4163 |
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