|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:96264..101304- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022541 ID=XLOC_022541|Name=XLOC_022541|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5041bp|location=Sequence derived from alignment at sc0000228_pilon:96264..101304- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGATGGAATGGATGGAAACAAACCAAACACAAAATCTGAACTCAC
GACTCAAAATCCTTTGTCAAACGGTGGTTTGAAAGAAGTAAGTTTATTTG
ATAAAAGAATGGAGTCTCCTAAGGTGGATGGGAAAGCAATGAACAAGCAT
TTAAACGTTAATACTGGCTATGAAATGAAGACAAATTTATCAAATAACAT
CAAACCAAAACAGAGGCTTATTCTTGACCCAAACTTCAGTCTGCTTAGAC
CAGTCGACCTTTCAATTACAAAGAAAATGAAAGTCAAGTCACCCATGAAG
AAGGAACCCTATTTGAATAACAACCACAAGGAAAAACATTCTACGAATGG
AAAAATCAAAGACAAACATAATGGCATTGAATTGAAGAAGAAACCACCAG
TTTTAAGCCCAGATAAACTAATTGACAAACAAAGAGATAAATCTATTAAA
CACTCAAGTGTTTTTAACATGAAAAACTTTGTAATGAGCTCACCAAACTC
ACCTACAAAAGTAAAACACAAAGACAGAGACAAAGAAAAAGATGAAAAGG
CTCACAAAAAGAAAAAACATAAACATCATCATCACGATAGTTTGAAACGA
AAGGTGGATAGTGCACACCCCTCACCAGTCAAAAAGATTAAAAAGGATCC
AGACAATTTACATTTGAAACACACTCAGGAACATTCACCAAAATCTGAGG
AAATGTTAAAAGAATCAAAGAAAGACATTAAAAAAGAAGGAAAAGAAATA
AAACAGGAAATTATTCCTATTAAAGCTAAATTACCTGAAGTTGCGAAGAA
CAGACCTGACAATTTAACACATAAAAATACAAAATTGACAAGACTTGAAC
CTTCAGAACATAAGATTCATAATCCAGATATTTCTGAAGGTCATTCTTTG
AAAAAAGAAGAAAGTAAAAGTCTACAATCTCCTTTGAAGAAAGAAAACAT
TTTGATTGATGATACTTCGACAAAAAAATTCAAAACAAAAGAGGACAGTT
TAGAGAAATCTAAAAATCAGATTGATGGCCTTGAGAAGACACATGATAAT
GAACAGAAAGTCAAAGCTGATCCAAAGAGTTTGAAACATAAAGCTGGAAG
TTCTCACAAGGAACAGAATGAACAGAATATTCAAAATATGCCTGAGAAGA
CAAAACTCAAAATGGAAGAAAACCAAAAACCACAGGAACAGAAAAGTAAA
GGTATAAATTCATTCAATCCTCAATGTTTTACTTTACTCTGGTACTTTCT
TTTAGTGGCCTTTGAATGGTTTAAGATTACAGTTAAATATACGCAAAGTT
TATTACACTGTCATTCTGACCAGAAATGGATGATCTTAACCTTTCAGAAG
AGACTCTTGTTTATCAAAATTGACCTTGGACATTTAAAAGAGCTCTAAAT
AGCTCACCACTGAGTGTCTCAAAGGGACATACCACAAACCCAATTTAGAG
AATAAGTATTTTAGTACACAATGTACTAAAATTCTTTGGGACATTTTGAG
ACAGAACACCCTTATTTGATCTCTTCAGGCAAATTTTGCGACCATTTTTC
CTCAGAATACTGATTTTTGCACCATGAAATTCATATCTTGCATAAATTGA
TACTTTTTTAACGGCACAATTTTATGAATTAAATAAACAAGACATTTGAC
TGAATGAAAAAAATTCAAGTTAGGAAATGTATTTCACTATGCCTACTAAA
ATCTTTAGAATAAAAAAAGATGCATCATGGTTCAAGATTTTGTTCAGCTG
TTACTCCTATACTTTCCAATATCTTGAATGGCTTGTTATCATACTGAATA
ATTTTCAATAAAAGGAAGGAAAAGTGACTTATTTTCAAAATTTCCTCAAC
TCTCTTGACAAACATTCCTTGTGTTGAAAATTAGACATTTATTGCCTTTG
AATGATCTATTCTGAATTTTTAACTGGCAAAAACTAAATACAGTCCAAAA
TTTTGTCCCGTGCACAACGGCACAAAAGTCTTGATTTCTCTCTCTTCTTG
CAGCAATATGCTTTTTCTTGACTTTACATGTACTGGCGATATGAGTGAAA
ACTTTTTGTCCCGTTTGTAACAAAGTGTCCTGTCCACAACATTTTTCTCA
AGATTGGGGCTGCAACCATAAAAATTTATAACATTCCAAGGAAGGTTATT
TAGTAAAGTTCACAAAAATGTGAAGTTCTTAGAAATTGCATTTGCCAAAG
TTGAGTCATGAGTCCTCAAAAAGTGCATGTTGCGGACTGGACATATGATT
TTTCTGCAATTCATCTCTTGAATTAAAAAATCTTATTCCAGTCTAAAATC
GAAATTTGAGGGCAAATAATTTATCTTTTTGAAGTCCAAATCTGACCAAA
TGAAAAAAACTGCCAAACAGCTATAACTAATTTTCCTCTCAAAACTAACC
TTGAGGTTGAGGAGGTTTGGTGGACACCAAAATTTCTTTAACCCTTCCCA
AATGGCCATTTCATACTAAGGGTAATGACCCTCTAAAGCTTATTATAGAA
ACCGGTAAAACACTCAATTTAGGTTTTCCTGGGGTTTGTAGTAACTTCAA
CTTTGATGTTTTTTCACTGATGGGCAAACAGTACGATAATAACGAATTAG
CCATTAGTGCATACAGCCATTAGTGCATACTTTTATGTCCAAATTCTTTT
GATTTCATTTTATAGAAGCCCTTAGAAATGAGCGTCTCAAGAAAAAACGA
AAGCATTACAAAGACATCCTAGAAAAGCACTTTGTCGATGTTGACTATTG
TCTACGAAAGAAAGTTAGCCCTAACATGAAATATGGCAAATACATCCATA
CCTATGTTGATCCGAATGGTGGTGCTAAAGTATTACACTCTTATGCTGAT
GAGCTAACTCACGTTAAACCTGAATATTTACAAGACTTTGCCAAGGAATT
TTTAGATGCAGTTTTCCAAGAAAGAATGGAAGGACAATCGAATTATTGTA
TGGGTATTGTACATAATGCCGCTCTTTGTTTACCTGAGCTGGTGAATTAC
TTCAATGAAGAATACCCAAATATGATTGTTAAAGTGGAAACGCTAGGAAA
GAAATCAGATGTTTCTACATTGAAAATGGGTGATTATTTCGAAGCCATTG
AGAGTAATTATGTTAATGGGACGTTTAGAGCTGGTGGTATGCTCAATATT
AGTATGGTTGGAAAGGTTTCAGAAGAAACTGGTGGCTATTTCCCGGAATT
GTTGGATAAAATGGAACAAGACCCGTTTTTGAATATGACTTTACCTTGGG
GTGAGATGTCTATTCTGGACGGTTTTGATAGAAAGAAAAGTAACGATGGA
CCTATTATGTGGGTGCGACCTGGTGAACAGATGGTACCTTCTGTGGAAAT
GCCAAGATCACCAAGTGGTAAAGCCGGTGGTGGACGTAGAAAGTAAGTTT
CTCTGTTCTAGTTTATTTTGCATATTGATAAATTAAGCAGTTAAAACCTT
GTTGCTCTACTAAAATATGGGCAGGACTTTTCTATGAAGTTTCTTGAGAA
AAAATAATGATTTATTTGTTTGGTGAGAAGAAAGAAAACGACAAAGAAAA
GATAGATGGTCTGATTCAAGTTCGTGATTCTATATAAAATAACCTATAAC
CCCCTAATTCCAGTTATACCTGAAATTGCGCATGCCCATATCGAAATATT
GCAGTGCTTTCAGATAAGAATACCTTTCTAGTTTAAATCCTTTTGAATCA
TGTTTTAGAACTGGTGTAAATGAGTTGAATCGACTACAATACCTTCCTCG
AGCATCTGGACCACGAGAAACGCTAGCAGAAGATCGAACACGCTGTCACG
CAGACCACGTAGATCACGGACTAGATCGTACGACCACTGCAGCAGTCGGA
GTCCTGAAAGCTGTCCATATTGGTAAAAAGTAAGAATTCAAGCTTTTTTG
AAAGAATGAAAGGAAGAGCTTAATTTACTTTTAAAACTTTTTAATTCCTA
AGAAAGCAACTTGTTTGTTTCGAATACTTATTCCGATTCGACTTTTTGAC
ATCACCTGATAATCTCTTTTACTAGTTTTTGTTTTTATTTGGAATTAAAG
TGTGTCTATATTGTGTTTTAGACCTTGTATGAATCGTGATTGCAAAGACG
TGATATGTTTCGATCCAGCCGACCATTTAGCTGTTGTTGAAAAGATGCAG
TTAGATTTGCATGAACCTCCAATGTCGCAAGTATGTCAGAATATATAAGA
ATTATTTTTTAAAGGTGAACTGTTGCTGCTATAAAAAACGTAGTGCCTTA
AATTTTTCATGGGACTCCTTTTCTATTTTCACGTTTTCTTTGGCCCTACT
GTGAAAATTAAAAAAGTTGCGCCCTGGGATTCCATCAAAGTTTCATTTTC
TAGCTTTCCTAGGTTCCTGGGTCCTAATTGGTTTGCTTTAAACGCTTAAA
AGGATGTACATACCGATTGACGCAGAATTTCAAGTAGATTAAAAATACAA
TATAACTCGAGCATCCATTTCTGTACCAAAAATTTCGACTATTTGAAGTT
GGGGATGTTTTTTATGTAAATATGTTTAAATAAACAAAAATACACCTCCA
AGCGTCGCAAGAAGAACACTTTTTGAGTTTTAGGGGCGAAAAGAAACCTT
TGATACTAGCGGTTTTTTTGTTTTGTTTTTTTTGTGTGTTTTTTTGGTCT
AGTAGATATATCTATCTAGACTATTCATTATTTATTTGTTTATGTTTTTC
AGTGCGTGCAATGGCTCGACGATGCTAAACTGAACCAGCTACGCCGTGAA
GGGGTCCGGTACGCACGCATCAAACTACAAGACAACGATATTTATTTCAT
TCCGCGGAACGTTTGCCATCAATTCAAAACTGTATCGGCTTGCACCAGTG
TTGCTTGGCATGTCCGGTTAAAAATCTATTATCCGCACTTATATCCGGAC
AACGAAACTGCGGAGAAAACTGAGGAGGATGGTGGAAAGGTGGACAGGGT
GGCTGAAGTCGTTGGTAAAGATGGAACGTTGGTGAATGGTGAGTCAAAGC
ATACGAATGAACGAAAACATTCTGATTCTTCTGAAAGCTAG Coding sequence (CDS) from alignment at sc0000228_pilon:96264..101304- >XLOC_022541 ID=XLOC_022541|Name=XLOC_022541|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5094bp|location=Sequence derived from alignment at sc0000228_pilon:96264..101304- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGATGGAATGGATGGAAACAAACCAAACACAAAATCTGAACTCAC
GACTCAAAATCCTTTGTCAAACGGTGGTTTGAAAGAAGTAAGTTTATTTG
ATAAAAGAATGGAGTCTCCTAAGGTGGATGGGAAAGCAATGAACAAGCAT
TTAAACGTTAATACTGGCTATGAAATGAAGACAAATTTATCAAATAACAT
CAAACCAAAACAGAGGCTTATTCTTGACCCAAACTTCAGTCTGCTTAGAC
CAGTCGACCTTTCAATTACAAAGAAAATGAAAGTCAAGTCACCCATGAAG
AAGGAACCCTATTTGAATAACAACCACAAGGAAAAACATTCTACGAATGG
AAAAATCAAAGACAAACATAATGGCATTGAATTGAAGAAGAAACCACCAG
TTTTAAGCCCAGATAAACTAATTGACAAACAAAGAGATAAATCTATTAAA
CACTCAAGTGTTTTTAACATGAAAAACTTTGTAATGAGCTCACCAAACTC
ACCTACAAAAGTAAAACACAAAGACAGAGACAAAGAAAAAGATGAAAAGG
CTCACAAAAAGAAAAAACATAAACATCATCATCACGATAGTTTGAAACGA
AAGGTGGATAGTGCACACCCCTCACCAGTCAAAAAGATTAAAAAGGATCC
AGACAATTTACATTTGAAACACACTCAGGAACATTCACCAAAATCTGAGG
AAATGTTAAAAGAATCAAAGAAAGACATTAAAAAAGAAGGAAAAGAAATA
AAACAGGAAATTATTCCTATTAAAGCTAAATTACCTGAAGTTGCGAAGAA
CAGACCTGACAATTTAACACATAAAAATACAAAATTGACAAGACTTGAAC
CTTCAGAACATAAGATTCATAATCCAGATATTTCTGAAGGTCATTCTTTG
AAAAAAGAAGAAAGTAAAAGTCTACAATCTCCTTTGAAGAAAGAAAACAT
TTTGATTGATGATACTTCGACAAAAAAATTCAAAACAAAAGAGGACAGTT
TAGAGAAATCTAAAAATCAGATTGATGGCCTTGAGAAGACACATGATAAT
GAACAGAAAGTCAAAGCTGATCCAAAGAGTTTGAAACATAAAGCTGGAAG
TTCTCACAAGGAACAGAATGAACAGAATATTCAAAATATGCCTGAGAAGA
CAAAACTCAAAATGGAAGAAAACCAAAAACCACAGGAACAGAAAAGTAAA
GATGGCCGATGGAATGGATGGAAACAAACCAAACACAAAATCTGAACTCA
CGACTCAAAATCCTTTGTCAAACGGTGGTTTGAAAGAAGTAAGTTTATTT
GATAAAAGAATGGAGTCTCCTAAGGTGGATGGGAAAGCAATGAACAAGCA
TTTAAACGTTAATACTGGCTATGAAATGAAGACAAATTTATCAAATAACA
TCAAACCAAAACAGAGGCTTATTCTTGACCCAAACTTCAGTCTGCTTAGA
CCAGTCGACCTTTCAATTACAAAGAAAATGAAAGTCAAGTCACCCATGAA
GAAGGAACCCTATTTGAATAACAACCACAAGGAAAAACATTCTACGAATG
GAAAAATCAAAGACAAACATAATGGCATTGAATTGAAGAAGAAACCACCA
GTTTTAAGCCCAGATAAACTAATTGACAAACAAAGAGATAAATCTATTAA
ACACTCAAGTGTTTTTAACATGAAAAACTTTGTAATGAGCTCACCAAACT
CACCTACAAAAGTAAAACACAAAGACAGAGACAAAGAAAAAGATGAAAAG
GCTCACAAAAAGAAAAAACATAAACATCATCATCACGATAGTTTGAAACG
AAAGGTGGATAGTGCACACCCCTCACCAGTCAAAAAGATTAAAAAGGATC
CAGACAATTTACATTTGAAACACACTCAGGAACATTCACCAAAATCTGAG
GAAATGTTAAAAGAATCAAAGAAAGACATTAAAAAAGAAGGAAAAGAAAT
AAAACAGGAAATTATTCCTATTAAAGCTAAATTACCTGAAGTTGCGAAGA
ACAGACCTGACAATTTAACACATAAAAATACAAAATTGACAAGACTTGAA
CCTTCAGAACATAAGATTCATAATCCAGATATTTCTGAAGGTCATTCTTT
GAAAAAAGAAGAAAGTAAAAGTCTACAATCTCCTTTGAAGAAAGAAAACA
TTTTGATTGATGATACTTCGACAAAAAAATTCAAAACAAAAGAGGACAGT
TTAGAGAAATCTAAAAATCAGATTGATGGCCTTGAGAAGACACATGATAA
TGAACAGAAAGTCAAAGCTGATCCAAAGAGTTTGAAACATAAAGCTGGAA
GTTCTCACAAGGAACAGAATGAACAGAATATTCAAAATATGCCTGAGAAG
ACAAAACTCAAAATGGAAGAAAACCAAAAACCACAGGAACAGAAAAGTAA
AGAAGCCCTTAGAAATGAGCGTCTCAAGAAAAAACGAAAGCATTACAAAG
ACATCCTAGAAAAGCACTTTGTCGATGTTGACTATTGTCTACGAAAGAAA
GTTAGCCCTAACATGAAATATGGCAAATACATCCATACCTATGTTGATCC
GAATGGTGGTGCTAAAGTATTACACTCTTATGCTGATGAGCTAACTCACG
TTAAACCTGAATATTTACAAGACTTTGCCAAGGAATTTTTAGATGCAGTT
TTCCAAGAAAGAATGGAAGGACAATCGAATTATTGTATGGGTATTGTACA
TAATGCCGCTCTTTGTTTACCTGAGCTGGTGAATTACTTCAATGAAGAAT
ACCCAAATATGATTGTTAAAGTGGAAACGCTAGGAAAGAAATCAGATGTT
TCTACATTGAAAATGGGTGATTATTTCGAAGCCATTGAGAGTAATTATGT
TAATGGGACGTTTAGAGCTGGTGGTATGCTCAATATTAGTATGGTTGGAA
AGGTTTCAGAAGAAACTGGTGGCTATTTCCCGGAATTGTTGGATAAAATG
GAACAAGACCCGTTTTTGAATATGACTTTACCTTGGGGTGAGATGTCTAT
TCTGGACGGTTTTGATAGAAAGAAAAGTAACGATGGACCTATTATGTGGG
TGCGACCTGGTGAACAGATGGTACCTTCTGTGGAAATGCCAAGATCACCA
AGTGGTAAAGCCGGTGGTGGACGTAGAAAAAGCCCTTAGAAATGAGCGTC
TCAAGAAAAAACGAAAGCATTACAAAGACATCCTAGAAAAGCACTTTGTC
GATGTTGACTATTGTCTACGAAAGAAAGTTAGCCCTAACATGAAATATGG
CAAATACATCCATACCTATGTTGATCCGAATGGTGGTGCTAAAGTATTAC
ACTCTTATGCTGATGAGCTAACTCACGTTAAACCTGAATATTTACAAGAC
TTTGCCAAGGAATTTTTAGATGCAGTTTTCCAAGAAAGAATGGAAGGACA
ATCGAATTATTGTATGGGTATTGTACATAATGCCGCTCTTTGTTTACCTG
AGCTGGTGAATTACTTCAATGAAGAATACCCAAATATGATTGTTAAAGTG
GAAACGCTAGGAAAGAAATCAGATGTTTCTACATTGAAAATGGGTGATTA
TTTCGAAGCCATTGAGAGTAATTATGTTAATGGGACGTTTAGAGCTGGTG
GTATGCTCAATATTAGTATGGTTGGAAAGGTTTCAGAAGAAACTGGTGGC
TATTTCCCGGAATTGTTGGATAAAATGGAACAAGACCCGTTTTTGAATAT
GACTTTACCTTGGGGTGAGATGTCTATTCTGGACGGTTTTGATAGAAAGA
AAAGTAACGATGGACCTATTATGTGGGTGCGACCTGGTGAACAGATGGTA
CCTTCTGTGGAAATGCCAAGATCACCAAGTGGTAAAGCCGGTGGTGGACG
TAGAAAAACTGGTGTAAATGAGTTGAATCGACTACAATACCTTCCTCGAG
CATCTGGACCACGAGAAACGCTAGCAGAAGATCGAACACGCTGTCACGCA
GACCACGTAGATCACGGACTAGATCGTACGACCACTGCAGCAGTCGGAGT
CCTGAAAGCTGTCCATATTGGTAAAAAAACTGGTGTAAATGAGTTGAATC
GACTACAATACCTTCCTCGAGCATCTGGACCACGAGAAACGCTAGCAGAA
GATCGAACACGCTGTCACGCAGACCACGTAGATCACGGACTAGATCGTAC
GACCACTGCAGCAGTCGGAGTCCTGAAAGCTGTCCATATTGGTAAAAAAC
CTTGTATGAATCGTGATTGCAAAGACGTGATATGTTTCGATCCAGCCGAC
CATTTAGCTGTTGTTGAAAAGATGCAGTTAGATTTGCATGAACCTCCAAT
GTCGCAAACCTTGTATGAATCGTGATTGCAAAGACGTGATATGTTTCGAT
CCAGCCGACCATTTAGCTGTTGTTGAAAAGATGCAGTTAGATTTGCATGA
ACCTCCAATGTCGCAATGCGTGCAATGGCTCGACGATGCTAAACTGAACC
AGCTACGCCGTGAAGGGGTCCGGTACGCACGCATCAAACTACAAGACAAC
GATATTTATTTCATTCCGCGGAACGTTTGCCATCAATTCAAAACTGTATC
GGCTTGCACCAGTGTTGCTTGGCATGTCCGGTTAAAAATCTATTATCCGC
ACTTATATCCGGACAACGAAACTGCGGAGAAAACTGAGGAGGATGGTGGA
AAGGTGGACAGGGTGGCTGAAGTCGTTGGTAAAGATGGAACGTTGGTGAA
TGGTGAGTCAAAGCATACGAATGAACGAAAACATTCTGATTCTTCTGAAA
GCTAGTGCGTGCAATGGCTCGACGATGCTAAACTGAACCAGCTACGCCGT
GAAGGGGTCCGGTACGCACGCATCAAACTACAAGACAACGATATTTATTT
CATTCCGCGGAACGTTTGCCATCAATTCAAAACTGTATCGGCTTGCACCA
GTGTTGCTTGGCATGTCCGGTTAAAAATCTATTATCCGCACTTATATCCG
GACAACGAAACTGCGGAGAAAACTGAGGAGGATGGTGGAAAGGTGGACAG
GGTGGCTGAAGTCGTTGGTAAAGATGGAACGTTGGTGAATGGTGAGTCAA
AGCATACGAATGAACGAAAACATTCTGATTCTTCTGAAAGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:96264..101304 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2209-2547:340 |
| Aaloc | 2101-2208:970 |
| Aaloc | 1930-2097:1333 |
| Aaloc | 1204-1926:2375 |
| Aaloc | 1-1200:5042 |
|
