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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000377_pilon:170584..173923- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022518 ID=XLOC_022518|Name=XLOC_022518|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3340bp|location=Sequence derived from alignment at sc0000377_pilon:170584..173923- (Clytia hemisphaerica_ch_hm2_pilon)
TCAAGCGGCAGAGAAGATGAAAAGAGTTTCAACGTGAAATCATCTGTACC
TCTGGGAACGCTTGGTGCCAAATTCGAAAGCAAAAATTTCACTTACATCT
GGAGAGAGGTGAGAGATCCCCTTTGCTTGGAAACATTGAATTGAATCATT
CAATCTCTGAAATAGAAGAAAATAAGTCGTTAGGCTTTCGAATGAGTAGT
TTTTCTCTACGACTTTGAATTTTTGTTAGATTTCAAGTGCGACGGAGTTA
AGCTTGTAACGTCAGTCTTGAGCCATCAAAACCTTGTTCCTATTATAAGA
GCTCGTACAGTTCTCTCAACCAATAAGAATGCCTCTATGTTTCAGGTAGA
GGGCTCGAGTTTTTCAGTAGGAGTGGCTGTTTCATCAGTGTACAAAGACG
ATCTACAATTACAAAGTTCGACAACAAAAGGAAATGAACTTTATCATCGA
TTGAGTTTACAAGATGGTATACAAGATGAATTGTGTTCACATTATGGTTA
CATTGCTATCAAAGGTAAAGAAAAGTTCCTCTAGATAGTTTGTAACATCT
AATGATTAGGTTTGTCAGCACAAAAATACTAGACCAGCTCCTGAGTGCAG
GGTAGCGCCACCTAGCGGGGTCCTAATTTTCGATACGATCTCCAATTCAT
GGAATGAAGAGGAAAATATCGTTTAAGGGCTCTGACCATAATCAGAAAAT
TGATTTTAGTATCTGAACATAAAAGTTATTTTTTAGATTCTTTAACACTT
TTAACAAAGAATTGCCTTTATAAATTGCTTTTTGATCAAACCCCTTAAGA
GTAATTAAGAACTTAATTGAAAAATTACGTTATGAACTTTAAAAAGACGT
TAATAATATGTTGCATCACCTTCTTTTATTAAAAGTGCTAAGTTTTAAAG
GGTAATTAACCTTTTTGTTTCAAACTTTTTCAAACTGTCCGCAAAGAATT
GAACTATTTCAAATTTTGCGGAAAATTTTTCTAAAAAGATGTGTCAAAAG
TTATGACTGTTTTTTTAAGCAAAATCCAGATGAAAAATTGATGAAAAACC
ACTATTTTGAAGATTTCGAGACAAAGAAGCATTTACAAAAAATTTTCCGC
AAACATTTTTATTGTTCGGTAAAAGATACACCATCTACTGCGAAAAATTT
TTCAAAATGTTTTTTCTTCACCGAAACTAAGCTCTTCAAAGTTGAAATAC
TCTTCCTCGCAAAAGTCTTCATTTTCTTCTTCATCAAATTTTTTCAATGC
AATTTTTAAATTTTCAGATTCAGGAATAGTTTGTCTAACAGAAAAAATGT
ATAACATGCCATAGTTTTGTTGGTTACATCAGTCAGAAAACACATTTTAA
ACACGGCAATTATGAAAAATTCACTATGGTCAGAGCCCTTAAGGGGGCTT
TTGGACTCCAGAGGGTCTGGAGTAGGGGGTCGGGTAAGGAATTACTACGG
AGAAGCCATTTTCATGTCAATAACATCAATCCGTATTTTTCGATCTACAA
TCAGTGCCATAATATATTAGCACTTTTGGCTAATTTACCATCTTTCGAAA
ATTTAAGTTCGAGCGAGAATGTTTTAGGCCTTCAACTTGATTTCATCGAT
TATTTCGATCTGAGAGGGATTCATTGGTATCTAGGCTAGATTTCAAGCCC
TACTGGACCATTTTTGAGCTTTTGGGTCCTTAGATCTTAAGTCTAGCGTT
AAAACTCAGAGTTAAAACTCTACCCTTCGAACCTACTTTAGAGCACTTAC
AAATCGATTGTGGTTTCAAAACACCCCGTTGAATTTCCCTTTTTGTGCCA
ATTATTTTGTCACTGATTGTAGCCAAGGATCAGTGCCAATTAATTTGACA
TTTCTTGTGTGTCATTACCATGATTGGAAAAAATTTTCTACATGAAATGA
TCTGCTCTTTCCGTATTTTACAGATCAACCGGTAGTTAGTATTGCACCGG
ATTCATTTGAGCAACCGAGCGTTTATTATGAAAAGGAGAACAATGAAACT
GTCAAAACTCTCCAAAACTATTTCAATGGGTATGTTGAAAACCCTACAGC
ATTCAAGGTAAATAAGGACATGCTATGATATTACCTGATCAGAACTACAC
TCTATCAAATTAGTTAAACAATTTTAGAGCAAAGCCTTTGTCTAATTTAT
GCACCTTAAGAAGGGCAAATCGGATTTGGGATAAGTGAACTTACCCTTAT
CTAAGTAACAAAACCTGTAAGTGAACAAGTACGACAAAAACAACGTCTGA
AGCAACCTTTTTTCAATCTCATTAACAAATATCTATTTACTTTTTTGACT
TTCTTAGAGTAACACCATTCGCAACGAAATTCGTCAGGCTGTCATGGCAA
CCAACTTAATGAACGAAATCTGGACTGGGGACGAGTCTAATCAAAGACTT
ATCATCAAATGGAGGTTAGGAAAGGTTTAGATTTGGACGAAACCATTAGG
TGCTCTAATTGTTATTTGTTACTCAAAGATACTTTGATTTGTTTCAAAAA
CGCTTCACATAATTTTTTCAGGTACATTGGTATGGAGAATGGAGTTTTCA
GAATTTTCCCTGGAATAGAGGTTCCAGAATTTGACCCTCGTCAGCAACAA
TGGTAAGTGGTTTGGACAATTTAATGAAACATAGCAACGACAGAGAAGTG
TTTTTTAGAAAACTGTTTAGATAATACACGTTTTTTATAAGAACAAACTA
TATAAGAACGTAAGGCTTTAATGGCCAAAATGTTAAGAACTAGTTTAGAA
AATTTTAAAGCTTTGCAGACTCTAAAATAGCCAATTTCTTAAGAAAAGAG
ACAAAAAATGCTCACAAAATGGTGAAAATAAGAACTCATGTTAAGAACAT
TTTAATTCTCAAAACTCAAAAACTTAAAAACATCCTTCAAAGGCTTCAAA
GATTTTGGATGTTCTTATAAAAAAACGTGTGTTTATGAACATTTAACTTG
ATAGACAGGCCATTCAAATTTCTTTCTTTACGTTTACAGGTACCATCTTG
CGGAAACTTTTCCCGGCAAACTTGTGTTCACGACACCTTACAAAGATTTG
AACGATCCTTCACAAGCAAGCATCTTATCTCTCAGCAAACAAATTACTGA
GTAAGAAAAACCATTCTAAAATTCACCAACGAGACACCAAAAAGACTTGC
CTCTGTTCCCATCTTAATGTATGTTTCTCCTTTTCACTTTGATATATTTT
CTTTTCTTTCAATGGTTCACTTATACTCTTTGCATTTCAGAGAATTGAGT
GGCGTAAAGCAAGGATCAGGCGTAATTGGAATGGATTTCGAATTTCGTTA
TTTTCAATTTCTGATCGAAAGAGATTTGACTTTATGTGCT Coding sequence (CDS) from alignment at sc0000377_pilon:170584..173923- >XLOC_022518 ID=XLOC_022518|Name=XLOC_022518|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1620bp|location=Sequence derived from alignment at sc0000377_pilon:170584..173923- (Clytia hemisphaerica_ch_hm2_pilon)
TCAAGCGGCAGAGAAGATGAAAAGAGTTTCAACGTGAAATCATCTGTACC
TCTGGGAACGCTTGGTGCCAAATTCGAAAGCAAAAATTTCACTTACATCT
GGAGAGAGTCAAGCGGCAGAGAAGATGAAAAGAGTTTCAACGTGAAATCA
TCTGTACCTCTGGGAACGCTTGGTGCCAAATTCGAAAGCAAAAATTTCAC
TTACATCTGGAGAGAGGTAGAGGGCTCGAGTTTTTCAGTAGGAGTGGCTG
TTTCATCAGTGTACAAAGACGATCTACAATTACAAAGTTCGACAACAAAA
GGAAATGAACTTTATCATCGATTGAGTTTACAAGATGGTATACAAGATGA
ATTGTGTTCACATTATGGTTACATTGCTATCAAAGGTAGAGGGCTCGAGT
TTTTCAGTAGGAGTGGCTGTTTCATCAGTGTACAAAGACGATCTACAATT
ACAAAGTTCGACAACAAAAGGAAATGAACTTTATCATCGATTGAGTTTAC
AAGATGGTATACAAGATGAATTGTGTTCACATTATGGTTACATTGCTATC
AAAGATCAACCGGTAGTTAGTATTGCACCGGATTCATTTGAGCAACCGAG
CGTTTATTATGAAAAGGAGAACAATGAAACTGTCAAAACTCTCCAAAACT
ATTTCAATGGGTATGTTGAAAACCCTACAGCATTCAAGATCAACCGGTAG
TTAGTATTGCACCGGATTCATTTGAGCAACCGAGCGTTTATTATGAAAAG
GAGAACAATGAAACTGTCAAAACTCTCCAAAACTATTTCAATGGGTATGT
TGAAAACCCTACAGCATTCAAGAGTAACACCATTCGCAACGAAATTCGTC
AGGCTGTCATGGCAACCAACTTAATGAACGAAATCTGGACTGGGGACGAG
TCTAATCAAAGACTTATCATCAAATGGAGAGTAACACCATTCGCAACGAA
ATTCGTCAGGCTGTCATGGCAACCAACTTAATGAACGAAATCTGGACTGG
GGACGAGTCTAATCAAAGACTTATCATCAAATGGAGGTACATTGGTATGG
AGAATGGAGTTTTCAGAATTTTCCCTGGAATAGAGGTTCCAGAATTTGAC
CCTCGTCAGCAACAATGGTACATTGGTATGGAGAATGGAGTTTTCAGAAT
TTTCCCTGGAATAGAGGTTCCAGAATTTGACCCTCGTCAGCAACAATGGT
ACCATCTTGCGGAAACTTTTCCCGGCAAACTTGTGTTCACGACACCTTAC
AAAGATTTGAACGATCCTTCACAAGCAAGCATCTTATCTCTCAGCAAACA
AATTACTGAGTACCATCTTGCGGAAACTTTTCCCGGCAAACTTGTGTTCA
CGACACCTTACAAAGATTTGAACGATCCTTCACAAGCAAGCATCTTATCT
CTCAGCAAACAAATTACTGAAGAATTGAGTGGCGTAAAGCAAGGATCAGG
CGTAATTGGAATGGATTTCGAATTTCGTTATTTTCAATTTCTGATCGAAA
GAGATTTGACTTTATGTGCTAGAATTGAGTGGCGTAAAGCAAGGATCAGG
CGTAATTGGAATGGATTTCGAATTTCGTTATTTTCAATTTCTGATCGAAA
GAGATTTGACTTTATGTGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000377_pilon | genome | sc0000377_pilon:170584..173923 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 715-813:100 |
| Aaloc | 604-711:351 |
| Aaloc | 523-600:819 |
| Aaloc | 415-519:1034 |
| Aaloc | 283-414:1416 |
| Aaloc | 112-279:2996 |
| Aaloc | 4-111:3341 |
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