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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000377_pilon:178774..181323- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022516 ID=XLOC_022516|Name=XLOC_022516|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2550bp|location=Sequence derived from alignment at sc0000377_pilon:178774..181323- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTTACATTGTTTCTGGTTAACATTTTGTTTGTTATGGCAATTCA
TGAAACAGAAGGGACAGTCACTTCAACCTTAGAAGACCAAGTGACTGACA
TGTCAAAAGCTTTGAATGATTTTGTAAACACAAACTTGGGCGTTGATCAA
CTACAGGTACAGTGTAAGTTAGAATAGGCTATTTCACAGTCGAAATGGAT
AATGGGTAATCAGGACTGACTGCGCCTCCATTACGGCTTTCTGTTGGCTA
GACGCAATAATCTTCAAAAAATTTCAAAGCTCTGGTCCAATAGTAAGTCG
TCATTAGCGCGCAGTGGTCCTGATTACCCATTACGCTTTGCGACTGTGAA
ATGGCCTATTAGAGTATTAAATGGAGAAAGTGACATCTTGACATTTCAGA
AGAGTGCTTCGTTAGATATTCAATTCATAGAATTATATTGCAGACTGAGA
ATAAATGGTTTGGATGTGTGTTGATGTGTAACAATAAAAAAGTATTTTGA
ATATTTTTACCATTCGAATTTGTTTATACAGTAGAGTCTCTACAACTCGA
AATGTTTTCAACTCGAACAAATTAATGTTCCCCGTGCTGGTTCGAATTAT
AGAGACTCCACCCACTGTATAGGTTTCACAACGCAGATATTTTCAATTTT
CAGGACCATTTGAGCAAAATTACCAGCAAAAAAAAAACACAAGAAGGATC
TGAAATTCTCAGAAAGGTGAGTTACTTTTCATGCTATAACAAGCTCAGCT
CATAAAACTTTGTTAGGAGGAAGAAGACCACAAAATATTAATCAAACTAA
TCCTCGACTGGCCCAATAATGTCGATGTACATCTTAAAAGAACTTCCAAC
GCTACTCCAATTATGGCAGAGGGAACAATGGCCAAACATTGAAACAATTA
AAGAATGGATATTCTGGACCTGTGCTTATTTAGCATTTTTTAATAGAGAA
AATTTAGTCATATCGAAGTTGCACAATTTTTGGTAGTAACACTAACAATG
AGTATATAGCTTGAAATCCTTCATGTTGAAATATAATGTTTTCGAAACTA
ATCTATCTGAAACTCATTATCATGATAAATAGTTAATAACAAACGTTAAT
AGATGCATGTAATTAAAGGATGCAGTTAATTGTGAAAGATAGAAAACATT
TTTTTGCACAGTGGTTTTCTAATGCAATAAACGATGTTCACTTAGTTTCA
GGAAGTATTAAAAACCCGTCAGGTATTTCCCTTGCTTATGATGTCCGTGA
TTTCTGGGAGAAAAATCCTAAAACATAATTTCCCTTCTGAAATGATCAAT
GAATTTATCGCAAGTTATAAGAATGACCTCTTAGAAATGATACACCCCTT
CTCACACAATCACTGGGAATCGTCCCATTGGAAAAATTAGCCAAAAAACC
CCTAGTGGAAAGTTATACTCCAATTTTTATCCCCACTGAAAATAATCAGA
CAAACAAATCCTCACTGCAAAATATTGTGCTATTTTTTCCATCCCCATTG
AATTTTCTGGCAAGAAAACAATAGAATTCAAATCCCCAGCCGTTAAAAAC
ATAGGAATATCGATCCCCATCAAGTTTTGGTCCGTTATTTTTACCCCCCT
CTGCCTGATAAAATCCAACCGGGTCTTAGGCTGCTGGCATCCACTAACGG
ATTCGTGCTCCTTATATACTACCTAGGGTTTTGTAGAGGTCTGCGATTCA
GACTAACCAGGTCTGTGAGAAGGGGGTGAAATAGTACCAATTTCGTGACG
TTTCATTTTCAAATATAAAATTTACTCTTTTTTATAAGAACTGCAAGGTC
CAATAAGGGGCAGCGGGCTTTTCCACTTGTAGTGGTCTGTATAATGCCCT
ATTAGCTTAAAGAGTCTCTTCTGGAGAAAATATTTCTTGATCTTCTGATC
CTCAAAGTTTGCGAGATTTTCCGTTACCTTTTCCAATCGAGGTGCTATGT
TTTCACATTACTTTTCCAGTTTCACGACAGCTTGGAAGAGAAAGTGAGGA
AAGCCAACCAAACGTTAGAAGAGCTTATTGACGTCATCAAGAATGATTTC
AAGGGGCCTGGCGACGGGGATGATAAACCAATCACGAGCTGTTGTGATTA
TGATGCCAGGAAAACTACCTACAGTAATCTGTTTAAGAACTGGGTGGGTT
TAGCGCCCGTATGCTTGAAGTGTCTTTACGCACGCTGGGTGGAGAAAATA
TTAACTTTGATTAACCAAGCAGGGGTTCTGCCTTATTTTTGATAGGCTTG
CGAATGAAAAATCCGGCGAATTCTAAATTCTAGGCCGGTGAATTCTTAGC
AAACCCATGTACATGAATTATTAGACCAGTGAATTGTAATTTTTTTTCGT
ACCTTGGACCAGCGAAACTCGCCATTCGACGGACCTAAACAAGACCCCTA
ACCAAGGGCTCGAATTTATTCTAGAAAACGATATCATTTGACAAAATACA
CTGACAAAATCTTGCACCCCTTTTTCACTAAAAGGTAAATTTTGATGACG
TTTGCGGTTATGCGAGTGTTGATCACAATTTATGTCCCAATCAATTGCGA
Coding sequence (CDS) from alignment at sc0000377_pilon:178774..181323- >XLOC_022516 ID=XLOC_022516|Name=XLOC_022516|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=918bp|location=Sequence derived from alignment at sc0000377_pilon:178774..181323- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTTACATTGTTTCTGGTTAACATTTTGTTTGTTATGGCAATTCA
TGAAACAGAAGGGACAGTCACTTCAACCTTAGAAGACCAAGTGACTGACA
TGTCAAAAGCTTTGAATGATTTTGTAAACACAAACTTGGGCGTTGATCAA
CTACAGATGGAGTTTACATTGTTTCTGGTTAACATTTTGTTTGTTATGGC
AATTCATGAAACAGAAGGGACAGTCACTTCAACCTTAGAAGACCAAGTGA
CTGACATGTCAAAAGCTTTGAATGATTTTGTAAACACAAACTTGGGCGTT
GATCAACTACAGGACCATTTGAGCAAAATTACCAGCAAAAAAAAAACACA
AGAAGGATCTGAAATTCTCAGAAAGGACCATTTGAGCAAAATTACCAGCA
AAAAAAAAACACAAGAAGGATCTGAAATTCTCAGAAAGTTTCACGACAGC
TTGGAAGAGAAAGTGAGGAAAGCCAACCAAACGTTAGAAGAGCTTATTGA
CGTCATCAAGAATGATTTCAAGGGGCCTGGCGACGGGGATGATAAACCAA
TCACGAGCTGTTGTGATTATGATGCCAGGAAAACTACCTACAGTAATCTG
TTTAAGAACTGGTTTCACGACAGCTTGGAAGAGAAAGTGAGGAAAGCCAA
CCAAACGTTAGAAGAGCTTATTGACGTCATCAAGAATGATTTCAAGGGGC
CTGGCGACGGGGATGATAAACCAATCACGAGCTGTTGTGATTATGATGCC
AGGAAAACTACCTACAGTAATCTGTTTAAGAACTGGGTAAATTTTGATGA
CGTTTGCGGTTATGCGAGTGTTGATCACAATTTATGTCCCAATCAATTGC
GAGTAAATTTTGATGACGTTTGCGGTTATGCGAGTGTTGATCACAATTTA
TGTCCCAATCAATTGCGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000377_pilon | genome | sc0000377_pilon:178774..181323 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 394-459:67 |
| Aaloc | 220-393:582 |
| Aaloc | 157-219:1898 |
| Aaloc | 1-156:2551 |
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