XLOC_022415 (mRNA) -

Overview
NameXLOC_022415
Unique NameXLOC_022415
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000175_pilon:322485..323298+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022415 ID=XLOC_022415|Name=XLOC_022415|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=814bp|location=Sequence derived from alignment at sc0000175_pilon:322485..323298+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTCATAATTATGGAAGACGAGAATGACGACGAAGATGGAAGAAAACT TACAATGGCATTGGATGACCTGTTTGTTGAACTTGAATTGGATGCTTCCA ACAGCATagctgaaatttttcaaagaatactTGGAACTTTATTAAGTCTG CAACGTGAGGTAATTGCCAGAATTTGATGTGAGACTATTATTGAGAACTT TTGAACCAGAGAAATATATGTGATAGATGTATTTGACAAGTGACAAAAAT TTTGCTTAATAGAAAAGCTTTACCTTCTTGCAAGGCTTTTCCTTTATTAA AGGTTTGTTAAGGTAGTGGTCTGGTCAATAAATACCCAACATTTTCAAAG CCTTAGCCCCCTATGGGAAATTTGATTCCATATCAAAATTACTGTTTACA GATATGGCAGGATTGTTTTCTCAAAATCATGGATGGAAGTTTGCCGGAGA GGTTTTTTGCTGGAAATTTTAGCAAAGAAAGACAGCTTAAAGGTAAAATT CTCTACTACTTACCTAATTTTTAAGGTTTAAGGGTACGTAAGGTCACCAA TTCAAATTAATCTCACAATCGTAGCCTTACCTTCGAGAAATCTTTCTATC CGGTTTGGCTATTTAAATCTAATACAACTCTATTGATTAGAATTTTCggt tattgataaaaatgttaaatctacttgatatagttttttttatagATCTT GAGGCTCAATTCTTCAGACCAGACTTAGCTCGCTGTAGTTCttttcaaga tgtttttgaaaaatttgcaagGAAAAAATTGGTCCCGACACCTGAGTGTT ACAAAGAAAATACA

Coding sequence (CDS) from alignment at sc0000175_pilon:322485..323298+

>XLOC_022415 ID=XLOC_022415|Name=XLOC_022415|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=738bp|location=Sequence derived from alignment at sc0000175_pilon:322485..323298+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTCATAATTATGGAAGACGAGAATGACGACGAAGATGGAAGAAAACT
TACAATGGCATTGGATGACCTGTTTGTTGAACTTGAATTGGATGCTTCCA
ACAGCATagctgaaatttttcaaagaatactTGGAACTTTATTAAGTCTG
CAACGTGAGATGCTCATAATTATGGAAGACGAGAATGACGACGAAGATGG
AAGAAAACTTACAATGGCATTGGATGACCTGTTTGTTGAACTTGAATTGG
ATGCTTCCAACAGCATagctgaaatttttcaaagaatactTGGAACTTTA
TTAAGTCTGCAACGTGAGATATGGCAGGATTGTTTTCTCAAAATCATGGA
TGGAAGTTTGCCGGAGAGGTTTTTTGCTGGAAATTTTAGCAAAGAAAGAC
AGCTTAAAGATATGGCAGGATTGTTTTCTCAAAATCATGGATGGAAGTTT
GCCGGAGAGGTTTTTTGCTGGAAATTTTAGCAAAGAAAGACAGCTTAAAG
ATCTTGAGGCTCAATTCTTCAGACCAGACTTAGCTCGCTGTAGTTCtttt
caagatgtttttgaaaaatttgcaagGAAAAAATTGGTCCCGACACCTGA
GTGTTACAAAGAAAATACAATCTTGAGGCTCAATTCTTCAGACCAGACTT
AGCTCGCTGTAGTTCttttcaagatgtttttgaaaaatttgcaagGAAAA
AATTGGTCCCGACACCTGAGTGTTACAAAGAAAATACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_022415XLOC_022415-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000175_pilongenomesc0000175_pilon:322485..323298 +
Properties
Property NameValue
Aaloc253-369:698
Aaloc160-249:402
Aaloc1-159:1