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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000319_pilon:196798..200823+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022375 ID=XLOC_022375|Name=XLOC_022375|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4026bp|location=Sequence derived from alignment at sc0000319_pilon:196798..200823+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGCTTCAAATTACAATAATTACATTGAACGTCCTAATCATTCAAA
GAACTATTGCCGTTTGTGTTTCACAGACTACAAAGTAAATCAGAACTCAA
AAGAATGCAGGTTTAActtatttaaattaaaaaaagacggCAGCGCTACC
CTCAGTAAAAGACTGCATGCGATTGGCTTGATCGTCGAAGAGGACTCCGG
CCTGTCAGAATCGATTTGCAGACCATGTgaatcaaagataaaaaagttAG
AAGAGGCACAAAGAATTAAGGAGAGTTGGGTCGGGGTTAAGAGGAAAGCA
CCAGAtaatgaagaagatgaagataaACAGCAGGTTATTGGAGGaaaaaa
aGCAAAGATTGAAAACGAAAAGGTGACTATCATTATAAATCAATACAATA
TATAATTATTTCCCGTACACGGCGGCCTTCGGTGCAGTTCCCAGTAAAAG
CATATATGAGCAGATCACAAAAATCTCAGTTCGGACAAACACCCTTGTTT
TTATTGCTCATAAAAGTGAGTTTAATAACTGAACTGActttaattttaga
aagaaGTAATTGATCTTGCTGACATTGATGATATCGCAAAGTCTTGctac
accgaaataccgaacgCGACCAAGGAGCTTGAAGCAGCTGATATGGAAAG
TGTGGTAAACTTTAGTGATGTGGAATCCTGTAAAAAAGTTGGTGCTTTAT
GTCCGGTGCTATCGAGTGCGTTAAAGGGTGCGATGGGAGGGAAAGATCGG
AAGTCAGGCGGAGAATCGGCAAGTGACCATGCGACACGAACTTTATGTTA
CGGCGCCATTTTTAAAGCAAGGTTGGTATTAAATGTAATGAGCGGGACAG
CATATTTATTCGATATCTTTGTAACTATAATAAGCGGAACTAATGGGTTT
CGaaaaaaaCTATTCCTTATATTAATATACGCATAGGTCGGAACTTTAGC
CTACGTAAAAGCCAATGATTATGCGACTTTCATTAcataattgattttat
tttgaaaggtaCCCCAAAAGTTCTAACGTCGTCGCTTCAAGAAACGACCA
GTTACTGATTTCGGCAGGTGCTAGCAAACGTTCTTTTGGGTGGTTTAGTA
AAATGGGTTTATCGAATGGTTACAACACAGCTTTGCAACGCAATGGGGAC
TTTGGTGCGAAATTCGATACGGAGGTTCAAGCATGGAAAAAAGATATCGA
AGATGATTATAAAGTGATATTGAAATTGAAGGAAGACAATGGTGTAACAT
TTAACGAAGCGAAACAATTAAGAAGACTCACTAACCCGGCTGCAGCTTTA
TTCAAGGTATAGCTGTccctttgaaatatttaagtttttatAAATCGGCA
GTAATCATAGTAACTCTTCTAATAAGTAAGCGGACACTATTTTTAGCAGA
CAGATTTAGTATACCCTGCAAATTTCTTCTAGATTGTTGGAGACAACCTC
GACTTCGAGAAGAGGACTCGACACCAAggaaaaaacaaacacaatgaAAG
CATTCACTGGTTCCACTATATGGCTATTTTGCACAGAGTTCACCCTTCAA
AAGGTATAAAGTATGCTCCGTTGTTTATCGAATGTTTTTAATTTGACAGG
AACTCAAATAACTTATCTAGATTTCCTGTAAAGCGGATAACTTAACCAAC
TTCCATGACTTTAAAAGGGGTCTATTTATTACTTATTTAGCTAACAGAAC
TTTGGAAGAGTATCAAAATATGCCCATTTTCCCTGGATTGAACACACAAG
ACGTCTTATCTAAAACCTACAAGGTTCTCATTGCAAGAAGCATTGTCACA
TTTATGCCGTCATTTAAGTTCCTTCGAAAGAACGTATGTTGGCATATCCC
TCATCCATTTACAAAAGAGATGTCAGAAAAATCCCAAGTGGTAAGTATTT
gacaaaagaaatatttgtcCATTTTATCTGAATAATTATTTTCCTTAGTT
TTCTGAAAGTTATTATTTAtaataaaagtgaaatattgatttttgaaata
gtATTTCTAGACAGTGTATTCTATTTTGATTCAGGTACCTCTTGGTCTCT
CATTTCATGCTGAAAACTCAACCACTGAAATAATTCAAATAATTCGGGAA
ATACAAGAAAGCTATGTACCAATGATGGAGGTTGAAACTGAAAACGgaga
aacaacaaaacaaatcaTTGAACCACTCTTATTCGGAGGTGATCAGTTAA
CGGAAGAGAGAGTTATTAATGCACAGCAAGGCTTTGTAGATTGTAGAAAT
GCTTACGAGATGCTCCAAGGTTTAAAACCAGCGTACGAAGACTGGCATTT
GAAACGCACACTATACGAGGTGAGTCCGAATACAAATTAGTTTAAAAAGG
TTATAATCACATAAATCTGAAAAtacttgaaatgaaaaaaataattattg
aaaatactaaattgatatttttccaacaggtgaaggaaaaaatatttcgt
cGAAGGGATTCAGGAGCACAACATGGAACAACAGAATGGTCGATGAATGT
CACTCACTCGACGAACGCaaaaaaaGGAGCCAAGGAGGATTTCAATGCTG
TCAAAGAATTCTGCGATATCGAAACAGATTCACTTATTGTTGCTGCTGCT
ATGACTCATTTTAACATGAACAAAATAGACGGTATATTATACTCATgctt
caaacaaaaaaattaaagttatagaATTTACGAATGTCACGTTTAACTTG
CATTAACAAAATTtgcaaacaatctttgaaaaggCTATTAAAATTAATTC
GCAATCCTTTTTTAGACGACAACATTCCTAACCACGTCAAAAATGGATCT
GATAAAGAAAAACACCAATGGCTACAAAATAACgtagaagaaattttcaa
aaagtaagtTAATGATATAATGTATAGTTTAAAAATCTATAAATTCTTTA
TCTAATATAATACAGTTTTCTATTCCTTACTTTACCTTGGtgacttatta
aaaaaaatatgttacacgtttttttagatTCACAGTCATGTACAATGTTG
AAATCACGCAAAAGAACGATCAAGAGGCGGAGGGGATAAAAATGTTGAAG
TTTTACCTTTGTGGCAAGTGCGAGAACAGAAAAAAGATgatttacaaaac
aaaaaatggacgAGACAAACATGAAGTCGCTAAACATAATTATGATAGGT
AAATTAGTCtagaaaagtaaaataaaactaaaagGTAGTAagtcctcgcg
aaaattaatccccttaaggtagTTCTCCAAAACTGTTCAGAGTTCACAAT
GAGAAATATTAATTCTAAAATATCTTATAAGTAAAATAATGTATTAAATT
TTCAATCCATATCTATTTAGAAACGCAACGGAATCAACCTCTGAACCTAA
CGAGGAAGATACAGTAGAGGATGAGAAAATGAACCACAAATTGAGCTATC
AAAAGGCTCTTTTCAGCTATAATTTGTTGTTACGTTCGATCAACGACGCA
ATCAGAGAGGGAGATGGTGAACGTTTATTCGAACTGTATAGAGTTGCAGT
CCTCTACTTCAAATGCTATGGTagaaataaatatgcttatactgttttga
agtctttttttcgcattcAAATGGAGCCAGCTGCTGCTCTAAGTCTTATT
TGGGAGCGTTTCATCAACAAACATGGAATGAAAGGATATAACATCAGCAT
GGATCTACACATGGAGCATTTGAACAACTTTTTAAAAGAGCTGCTTCGAG
ACCTCCGCGGAAATGTCAACAAAGAAAATGCAGAAAGAGTATCAAAGgct
gtaaaaaatttaaaatcaatcgtagaaaactttgaaaaggaacaaaaaat
taaagaacaaaaatcgtccaaaaataaggcaaaaaCTTTGAATGATGTCA
GACATCTTGTGACCCAATTTATGGAACAAAACATATTTGCTGAAGACCAG
GAACAATGTCAAAGTTATGAATCATTTCCAGCTTTCAATTCAGATACACT
AGCAAAACTAGATATTGACAGGCTCCTTCAATGGGGGAAAAGAAAGAAGG
AAGAATTTAAGCTGTTGTATTCTTAG Coding sequence (CDS) from alignment at sc0000319_pilon:196798..200823+ >XLOC_022375 ID=XLOC_022375|Name=XLOC_022375|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5430bp|location=Sequence derived from alignment at sc0000319_pilon:196798..200823+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGCTTCAAATTACAATAATTACATTGAACGTCCTAATCATTCAAA
GAACTATTGCCGTTTGTGTTTCACAGACTACAAAGTAAATCAGAACTCAA
AAGAATGCAGGTTTAActtatttaaattaaaaaaagacggCAGCGCTACC
CTCAGTAAAAGACTGCATGCGATTGGCTTGATCGTCGAAGAGGACTCCGG
CCTGTCAGAATCGATTTGCAGACCATGTgaatcaaagataaaaaagttAG
AAGAGGCACAAAGAATTAAGGAGAGTTGGGTCGGGGTTAAGAGGAAAGCA
CCAGAtaatgaagaagatgaagataaACAGCAGGTTATTGGAGGaaaaaa
aGCAAAGATTGAAAACGAAAAGATGATGGCTTCAAATTACAATAATTACA
TTGAACGTCCTAATCATTCAAAGAACTATTGCCGTTTGTGTTTCACAGAC
TACAAAGTAAATCAGAACTCAAAAGAATGCAGGTTTAActtatttaaatt
aaaaaaagacggCAGCGCTACCCTCAGTAAAAGACTGCATGCGATTGGCT
TGATCGTCGAAGAGGACTCCGGCCTGTCAGAATCGATTTGCAGACCATGT
gaatcaaagataaaaaagttAGAAGAGGCACAAAGAATTAAGGAGAGTTG
GGTCGGGGTTAAGAGGAAAGCACCAGAtaatgaagaagatgaagataaAC
AGCAGGTTATTGGAGGaaaaaaaGCAAAGATTGAAAACGAAAAGaaagaa
GTAATTGATCTTGCTGACATTGATGATATCGCAAAGTCTTGctacaccga
aataccgaacgCGACCAAGGAGCTTGAAGCAGCTGATATGGAAAGTGTGG
TAAACTTTAGTGATGTGGAATCCTGTAAAAAAGTTGGTGCTTTATGTCCG
GTGCTATCGAGTGCGTTAAAGGGTGCGATGGGAGGGAAAGATCGGAAGTC
AGGCGGAGAATCGGCAAGTGACCATGCGACACGAACTTTATGTTACGGCG
CCATTTTTAAAGCAAGaaagaaGTAATTGATCTTGCTGACATTGATGATA
TCGCAAAGTCTTGctacaccgaaataccgaacgCGACCAAGGAGCTTGAA
GCAGCTGATATGGAAAGTGTGGTAAACTTTAGTGATGTGGAATCCTGTAA
AAAAGTTGGTGCTTTATGTCCGGTGCTATCGAGTGCGTTAAAGGGTGCGA
TGGGAGGGAAAGATCGGAAGTCAGGCGGAGAATCGGCAAGTGACCATGCG
ACACGAACTTTATGTTACGGCGCCATTTTTAAAGCAAGgtaCCCCAAAAG
TTCTAACGTCGTCGCTTCAAGAAACGACCAGTTACTGATTTCGGCAGGTG
CTAGCAAACGTTCTTTTGGGTGGTTTAGTAAAATGGGTTTATCGAATGGT
TACAACACAGCTTTGCAACGCAATGGGGACTTTGGTGCGAAATTCGATAC
GGAGGTTCAAGCATGGAAAAAAGATATCGAAGATGATTATAAAGTGATAT
TGAAATTGAAGGAAGACAATGGTGTAACATTTAACGAAGCGAAACAATTA
AGAAGACTCACTAACCCGGCTGCAGCTTTATTCAAGgtaCCCCAAAAGTT
CTAACGTCGTCGCTTCAAGAAACGACCAGTTACTGATTTCGGCAGGTGCT
AGCAAACGTTCTTTTGGGTGGTTTAGTAAAATGGGTTTATCGAATGGTTA
CAACACAGCTTTGCAACGCAATGGGGACTTTGGTGCGAAATTCGATACGG
AGGTTCAAGCATGGAAAAAAGATATCGAAGATGATTATAAAGTGATATTG
AAATTGAAGGAAGACAATGGTGTAACATTTAACGAAGCGAAACAATTAAG
AAGACTCACTAACCCGGCTGCAGCTTTATTCAAGATTGTTGGAGACAACC
TCGACTTCGAGAAGAGGACTCGACACCAAggaaaaaacaaacacaatgaA
AGCATTCACTGGTTCCACTATATGGCTATTTTGCACAGAGTTCACCCTTC
AAAAGATTGTTGGAGACAACCTCGACTTCGAGAAGAGGACTCGACACCAA
ggaaaaaacaaacacaatgaAAGCATTCACTGGTTCCACTATATGGCTAT
TTTGCACAGAGTTCACCCTTCAAAAGCTAACAGAACTTTGGAAGAGTATC
AAAATATGCCCATTTTCCCTGGATTGAACACACAAGACGTCTTATCTAAA
ACCTACAAGGTTCTCATTGCAAGAAGCATTGTCACATTTATGCCGTCATT
TAAGTTCCTTCGAAAGAACGTATGTTGGCATATCCCTCATCCATTTACAA
AAGAGATGTCAGAAAAATCCCAAGTGCTAACAGAACTTTGGAAGAGTATC
AAAATATGCCCATTTTCCCTGGATTGAACACACAAGACGTCTTATCTAAA
ACCTACAAGGTTCTCATTGCAAGAAGCATTGTCACATTTATGCCGTCATT
TAAGTTCCTTCGAAAGAACGTATGTTGGCATATCCCTCATCCATTTACAA
AAGAGATGTCAGAAAAATCCCAAGTGGTACCTCTTGGTCTCTCATTTCAT
GCTGAAAACTCAACCACTGAAATAATTCAAATAATTCGGGAAATACAAGA
AAGCTATGTACCAATGATGGAGGTTGAAACTGAAAACGgagaaacaacaa
aacaaatcaTTGAACCACTCTTATTCGGAGGTGATCAGTTAACGGAAGAG
AGAGTTATTAATGCACAGCAAGGCTTTGTAGATTGTAGAAATGCTTACGA
GATGCTCCAAGGTTTAAAACCAGCGTACGAAGACTGGCATTTGAAACGCA
CACTATACGAGGTACCTCTTGGTCTCTCATTTCATGCTGAAAACTCAACC
ACTGAAATAATTCAAATAATTCGGGAAATACAAGAAAGCTATGTACCAAT
GATGGAGGTTGAAACTGAAAACGgagaaacaacaaaacaaatcaTTGAAC
CACTCTTATTCGGAGGTGATCAGTTAACGGAAGAGAGAGTTATTAATGCA
CAGCAAGGCTTTGTAGATTGTAGAAATGCTTACGAGATGCTCCAAGGTTT
AAAACCAGCGTACGAAGACTGGCATTTGAAACGCACACTATACGAGgtga
aggaaaaaatatttcgtcGAAGGGATTCAGGAGCACAACATGGAACAACA
GAATGGTCGATGAATGTCACTCACTCGACGAACGCaaaaaaaGGAGCCAA
GGAGGATTTCAATGCTGTCAAAGAATTCTGCGATATCGAAACAGATTCAC
TTATTGTTGCTGCTGCTATGACTCATTTTAACATGAACAAAATAGACGgt
gaaggaaaaaatatttcgtcGAAGGGATTCAGGAGCACAACATGGAACAA
CAGAATGGTCGATGAATGTCACTCACTCGACGAACGCaaaaaaaGGAGCC
AAGGAGGATTTCAATGCTGTCAAAGAATTCTGCGATATCGAAACAGATTC
ACTTATTGTTGCTGCTGCTATGACTCATTTTAACATGAACAAAATAGACG
ACGACAACATTCCTAACCACGTCAAAAATGGATCTGATAAAGAAAAACAC
CAATGGCTACAAAATAACgtagaagaaattttcaaaaaACGACAACATTC
CTAACCACGTCAAAAATGGATCTGATAAAGAAAAACACCAATGGCTACAA
AATAACgtagaagaaattttcaaaaaatTCACAGTCATGTACAATGTTGA
AATCACGCAAAAGAACGATCAAGAGGCGGAGGGGATAAAAATGTTGAAGT
TTTACCTTTGTGGCAAGTGCGAGAACAGAAAAAAGATgatttacaaaaca
aaaaatggacgAGACAAACATGAAGTCGCTAAACATAATTATGATAGatT
CACAGTCATGTACAATGTTGAAATCACGCAAAAGAACGATCAAGAGGCGG
AGGGGATAAAAATGTTGAAGTTTTACCTTTGTGGCAAGTGCGAGAACAGA
AAAAAGATgatttacaaaacaaaaaatggacgAGACAAACATGAAGTCGC
TAAACATAATTATGATAGAAACGCAACGGAATCAACCTCTGAACCTAACG
AGGAAGATACAGTAGAGGATGAGAAAATGAACCACAAATTGAGCTATCAA
AAGGCTCTTTTCAGCTATAATTTGTTGTTACGTTCGATCAACGACGCAAT
CAGAGAGGGAGATGGTGAACGTTTATTCGAACTGTATAGAGTTGCAGTCC
TCTACTTCAAATGCTATGGTagaaataaatatgcttatactgttttgaag
tctttttttcgcattcAAATGGAGCCAGCTGCTGCTCTAAGTCTTATTTG
GGAGCGTTTCATCAACAAACATGGAATGAAAGGATATAACATCAGCATGG
ATCTACACATGGAGCATTTGAACAACTTTTTAAAAGAGCTGCTTCGAGAC
CTCCGCGGAAATGTCAACAAAGAAAATGCAGAAAGAGTATCAAAGgctgt
aaaaaatttaaaatcaatcgtagaaaactttgaaaaggaacaaaaaatta
aagaacaaaaatcgtccaaaaataaggcaaaaaCTTTGAATGATGTCAGA
CATCTTGTGACCCAATTTATGGAACAAAACATATTTGCTGAAGACCAGGA
ACAATGTCAAAGTTATGAATCATTTCCAGCTTTCAATTCAGATACACTAG
CAAAACTAGATATTGACAGGCTCCTTCAATGGGGGAAAAGAAAGAAGGAA
GAATTTAAGCTGTTGTATTCTTAGAAACGCAACGGAATCAACCTCTGAAC
CTAACGAGGAAGATACAGTAGAGGATGAGAAAATGAACCACAAATTGAGC
TATCAAAAGGCTCTTTTCAGCTATAATTTGTTGTTACGTTCGATCAACGA
CGCAATCAGAGAGGGAGATGGTGAACGTTTATTCGAACTGTATAGAGTTG
CAGTCCTCTACTTCAAATGCTATGGTagaaataaatatgcttatactgtt
ttgaagtctttttttcgcattcAAATGGAGCCAGCTGCTGCTCTAAGTCT
TATTTGGGAGCGTTTCATCAACAAACATGGAATGAAAGGATATAACATCA
GCATGGATCTACACATGGAGCATTTGAACAACTTTTTAAAAGAGCTGCTT
CGAGACCTCCGCGGAAATGTCAACAAAGAAAATGCAGAAAGAGTATCAAA
Ggctgtaaaaaatttaaaatcaatcgtagaaaactttgaaaaggaacaaa
aaattaaagaacaaaaatcgtccaaaaataaggcaaaaaCTTTGAATGAT
GTCAGACATCTTGTGACCCAATTTATGGAACAAAACATATTTGCTGAAGA
CCAGGAACAATGTCAAAGTTATGAATCATTTCCAGCTTTCAATTCAGATA
CACTAGCAAAACTAGATATTGACAGGCTCCTTCAATGGGGGAAAAGAAAG
AAGGAAGAATTTAAGCTGTTGTATTCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000319_pilon | genome | sc0000319_pilon:196798..200823 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2011-2715:3322 |
| Aaloc | 1840-2007:2979 |
| Aaloc | 1753-1836:2768 |
| Aaloc | 1549-1749:2430 |
| Aaloc | 1264-1548:2035 |
| Aaloc | 1066-1263:1693 |
| Aaloc | 943-1062:1433 |
| Aaloc | 646-942:1010 |
| Aaloc | 373-642:550 |
| Aaloc | 1-372:1 |
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