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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000453_pilon:29329..31122- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022329 ID=XLOC_022329|Name=XLOC_022329|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1794bp|location=Sequence derived from alignment at sc0000453_pilon:29329..31122- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGATCACTATAGTAGTGTCTCAACAAAAGTCTATTGCTCTATCCCA
AAAAGATGTGTCAACATTGAAAGATCTGAAGGAACAAATTAAAAATGAGA
TTGGCATACCTGAACATTTACAAATACTTGTTAACAAAGATCATCTGGTT
TTGTCAGATAGGGGATTTAAAGAATTGCTGCAACAGGGAAAAGATGATAT
ATCTCTGAAATTTTTTGTTAAGGGTTCTGATGATCTGGAAATAGGTGCTA
TTTGTAAGGAAATTGGTATCAATAGTGAGATCGAGGAGGTTCATATCCAT
GTCTTCACCTCACGACAATCTATCCTTGATAGTGTCCAAGTTTCTCTTGG
AAGTAAAGTTTCTGATATCAAGAACCAACTTGATGAAGAGTATGCAATGA
ACAAGGAGTCGTTTTTCCTTTACCATGATCATCATGAAGATTTTGACGAA
ATTGAGGAATTACCTTTGAAACCTATAGAAGACGATTCATTCCTGGTTGA
TCTCTTTTTCAAGGGTGGGGAATTTTATGCGGGTGCAAGTGTTCAGGTAA
TGTTTAAAGACAACGAAGATGATCATTGGGCAAGTATGAGGGACACACTG
ACTATTCCTGGAATACGCCTGAAAAACTTATCTGATAATACCGTAGTACT
TGAATTTGATGGTCATGATATTATTGATACACTTACATTGAAGAGAAAGG
TAAATGAAAAATTGGGAATTCCTATTGAATTGCAAGTCTTTTATTTGGAT
GATTTCTTTTTGGAAGAATGTCATTTGATGTACAAGTTTTCATCCTATTG
TGATAGTTTGATCAATGGGTTTTTTGAAATCAATTTTTTCATCTTTCCAA
CAGAAGATGCCCTGGTTCAAAAAATCTGTACTGAAAATAACATTTTCGTT
TTTGATCCTCTTCCTGTTATTAGTGGGAATGGTACGCTATTTGATTACAG
TTTCGGATTGAATTCAACTGTTGAAGATTTGTTTTCGTTTATCGCCAAAG
AACTTGGAATTCCCGCACCTCATTTTGTTCTCATAGCTCATGGTCAGGAA
CTTAGAAGTATGGATACAAAGATTGCTAATATCTTTGATATCACGGATCA
AGAATATTTTTATAGTAAAAGAATTATCCTTAAAAATGTTGGCATATATA
TAGCAGTGAAGGGACTGTCGGAGAATTTGATGAATAAATTATATTTGAGC
AAGGGTATCAAAGCTTTGAAAACCGTCACAGTGTATTACCACAACAAAAG
CACCCTTGTTGAGAAGTATTCTGTTTCTGATATCCCAACTCTTGATGAGT
TGAGCATGAAGTTACGTGCTCATTTTGGTTTTTTCCCTCCTGTTCTGTTT
TTCAAGAACGATTATTTGAAGGATCAAAGTCTGTTTCATTGGAAAAAATC
ATTGGCATCCTTGTTTTTTGATGAGGAAACAAAATGCTACAACGAAAATA
TTGATATCTTTGTTTGTCTTAACATGGCCAGTGTTTTGGTTGGTGATGAT
GATATTGCAATTGTTAATGCCTTTTGTTCCAAACACAAAGTTAATTACCT
TCAAAGAGTTGTTGTTCATTTTGAAAATCAAGAAACGAAAGAGCTGAAAG
TTAGGGATGGATTAGAGACTATTGGCAAAATTAAAGATTTAATCGACAAA
CTTGATTTGTCTCGTAAAGGATCTTTTGTTCACAATGGTACGAATTATTA
TGGTAGAGGAAAAAGGTTGCTTGAGATTTATTTTGAAAAAGAAGATTCCT
CTTCGGACTCACTGGTGTTCAAATACACACCCCCAGTCTGCTGA Coding sequence (CDS) from alignment at sc0000453_pilon:29329..31122- >XLOC_022329 ID=XLOC_022329|Name=XLOC_022329|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3588bp|location=Sequence derived from alignment at sc0000453_pilon:29329..31122- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGATCACTATAGTAGTGTCTCAACAAAAGTCTATTGCTCTATCCCA
AAAAGATGTGTCAACATTGAAAGATCTGAAGGAACAAATTAAAAATGAGA
TTGGCATACCTGAACATTTACAAATACTTGTTAACAAAGATCATCTGGTT
TTGTCAGATAGGGGATTTAAAGAATTGCTGCAACAGGGAAAAGATGATAT
ATCTCTGAAATTTTTTGTTAAGGGTTCTGATGATCTGGAAATAGGTGCTA
TTTGTAAGGAAATTGGTATCAATAGTGAGATCGAGGAGGTTCATATCCAT
GTCTTCACCTCACGACAATCTATCCTTGATAGTGTCCAAGTTTCTCTTGG
AAGTAAAGTTTCTGATATCAAGAACCAACTTGATGAAGAGTATGCAATGA
ACAAGGAGTCGTTTTTCCTTTACCATGATCATCATGAAGATTTTGACGAA
ATTGAGGAATTACCTTTGAAACCTATAGAAGACGATTCATTCCTGGTTGA
TCTCTTTTTCAAGGGTGGGGAATTTTATGCGGGTGCAAGTGTTCAGGTAA
TGTTTAAAGACAACGAAGATGATCATTGGGCAAGTATGAGGGACACACTG
ACTATTCCTGGAATACGCCTGAAAAACTTATCTGATAATACCGTAGTACT
TGAATTTGATGGTCATGATATTATTGATACACTTACATTGAAGAGAAAGG
TAAATGAAAAATTGGGAATTCCTATTGAATTGCAAGTCTTTTATTTGGAT
GATTTCTTTTTGGAAGAATGTCATTTGATGTACAAGTTTTCATCCTATTG
TGATAGTTTGATCAATGGGTTTTTTGAAATCAATTTTTTCATCTTTCCAA
CAGAAGATGCCCTGGTTCAAAAAATCTGTACTGAAAATAACATTTTCGTT
TTTGATCCTCTTCCTGTTATTAGTGGGAATGGTACGCTATTTGATTACAG
TTTCGGATTGAATTCAACTGTTGAAGATTTGTTTTCGTTTATCGCCAAAG
AACTTGGAATTCCCGCACCTCATTTTGTTCTCATAGCTCATGGTCAGGAA
CTTAGAAGTATGGATACAAAGATTGCTAATATCTTTGATATCACGGATCA
AGAATATTTTTATAGTAAAAGAATTATCCTTAAAAATGTTGGCATATATA
TAGCAGTGAAGGGACTGTCGGAGAATTTGATGAATAAATTATATTTGAGC
AAGGGTATCAAAGCTTTGAAAACCGTCACAGTGTATTACCACAACAAAAG
CACCCTTGTTGAGAAGTATTCTGTTTCTGATATCCCAACTCTTGATGAGT
TGAGCATGAAGTTACGTGCTCATTTTGGTTTTTTCCCTCCTGTTCTGTTT
TTCAAGAACGATTATTTGAAGGATCAAAGTCTGTTTCATTGGAAAAAATC
ATTGGCATCCTTGTTTTTTGATGAGGAAACAAAATGCTACAACGAAAATA
TTGATATCTTTGTTTGTCTTAACATGGCCAGTGTTTTGGTTGGTGATGAT
GATATTGCAATTGTTAATGCCTTTTGTTCCAAACACAAAGTTAATTACCT
TCAAAGAGTTGTTGTTCATTTTGAAAATCAAGAAACGAAAGAGCTGAAAG
TTAGGGATGGATTAGAGACTATTGGCAAAATTAAAGATTTAATCGACAAA
CTTGATTTGTCTCGTAAAGGATCTTTTGTTCACAATGGTACGAATTATTA
TGGTAGAGGAAAAAGGTTGCTTGAGATTTATTTTGAAAAAGAAGATTCCT
CTTCGGACTCACTGGTGTTCAAATACACACCCCCAGTCTGCTGAATGACG
ATCACTATAGTAGTGTCTCAACAAAAGTCTATTGCTCTATCCCAAAAAGA
TGTGTCAACATTGAAAGATCTGAAGGAACAAATTAAAAATGAGATTGGCA
TACCTGAACATTTACAAATACTTGTTAACAAAGATCATCTGGTTTTGTCA
GATAGGGGATTTAAAGAATTGCTGCAACAGGGAAAAGATGATATATCTCT
GAAATTTTTTGTTAAGGGTTCTGATGATCTGGAAATAGGTGCTATTTGTA
AGGAAATTGGTATCAATAGTGAGATCGAGGAGGTTCATATCCATGTCTTC
ACCTCACGACAATCTATCCTTGATAGTGTCCAAGTTTCTCTTGGAAGTAA
AGTTTCTGATATCAAGAACCAACTTGATGAAGAGTATGCAATGAACAAGG
AGTCGTTTTTCCTTTACCATGATCATCATGAAGATTTTGACGAAATTGAG
GAATTACCTTTGAAACCTATAGAAGACGATTCATTCCTGGTTGATCTCTT
TTTCAAGGGTGGGGAATTTTATGCGGGTGCAAGTGTTCAGGTAATGTTTA
AAGACAACGAAGATGATCATTGGGCAAGTATGAGGGACACACTGACTATT
CCTGGAATACGCCTGAAAAACTTATCTGATAATACCGTAGTACTTGAATT
TGATGGTCATGATATTATTGATACACTTACATTGAAGAGAAAGGTAAATG
AAAAATTGGGAATTCCTATTGAATTGCAAGTCTTTTATTTGGATGATTTC
TTTTTGGAAGAATGTCATTTGATGTACAAGTTTTCATCCTATTGTGATAG
TTTGATCAATGGGTTTTTTGAAATCAATTTTTTCATCTTTCCAACAGAAG
ATGCCCTGGTTCAAAAAATCTGTACTGAAAATAACATTTTCGTTTTTGAT
CCTCTTCCTGTTATTAGTGGGAATGGTACGCTATTTGATTACAGTTTCGG
ATTGAATTCAACTGTTGAAGATTTGTTTTCGTTTATCGCCAAAGAACTTG
GAATTCCCGCACCTCATTTTGTTCTCATAGCTCATGGTCAGGAACTTAGA
AGTATGGATACAAAGATTGCTAATATCTTTGATATCACGGATCAAGAATA
TTTTTATAGTAAAAGAATTATCCTTAAAAATGTTGGCATATATATAGCAG
TGAAGGGACTGTCGGAGAATTTGATGAATAAATTATATTTGAGCAAGGGT
ATCAAAGCTTTGAAAACCGTCACAGTGTATTACCACAACAAAAGCACCCT
TGTTGAGAAGTATTCTGTTTCTGATATCCCAACTCTTGATGAGTTGAGCA
TGAAGTTACGTGCTCATTTTGGTTTTTTCCCTCCTGTTCTGTTTTTCAAG
AACGATTATTTGAAGGATCAAAGTCTGTTTCATTGGAAAAAATCATTGGC
ATCCTTGTTTTTTGATGAGGAAACAAAATGCTACAACGAAAATATTGATA
TCTTTGTTTGTCTTAACATGGCCAGTGTTTTGGTTGGTGATGATGATATT
GCAATTGTTAATGCCTTTTGTTCCAAACACAAAGTTAATTACCTTCAAAG
AGTTGTTGTTCATTTTGAAAATCAAGAAACGAAAGAGCTGAAAGTTAGGG
ATGGATTAGAGACTATTGGCAAAATTAAAGATTTAATCGACAAACTTGAT
TTGTCTCGTAAAGGATCTTTTGTTCACAATGGTACGAATTATTATGGTAG
AGGAAAAAGGTTGCTTGAGATTTATTTTGAAAAAGAAGATTCCTCTTCGG
ACTCACTGGTGTTCAAATACACACCCCCAGTCTGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000453_pilon | genome | sc0000453_pilon:29329..31122 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1794:1795 |
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