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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000261_pilon:37366..39259+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022281 ID=XLOC_022281|Name=XLOC_022281|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1894bp|location=Sequence derived from alignment at sc0000261_pilon:37366..39259+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCCAACTCTCAGGAATTCAAACCGTTGCAAGCGACCAAAACATTGA
GATGGGCAAGAATCGAAGAAGCAAAGATAGTGAAGACTGTCAGAAGTTTT
TCGAATGGATCGAAGTCAGAAATCCCTTTAATATGGTCGATGATAACCTA
CACTCACTGTCAACCGGCTGTATATCCATCAAAGGAAAGGAGAAAGTCAA
TTGCGATGATGCCGAGAATGTCGGGAAGAAGATCCAAAGTCAATTGGATG
ATGTTGTTTTCACGGAGGCGAAATTCCTAAAAAAGGATCTTCTCGTGCCT
CTTGACCACCTAACCAATGAGCCACTTGATGTCGACAGCAAAGATCTAGT
CAGTGTCAACCCTACTCTCCTGTTCACCAGACTCGCAGCTATTGCAGAAC
GCGAAGAGAATGTTGAACAGTTTTTCGACTATGAGTTGAACCATCAGGCT
CTTTCcttgttcaaaaatggtctgatGAGAAAGCCTGATAAAGCTGCTTT
GAAGAAAAGCCTGTTACCCGAAAAAGATGCCACAACTATGAATGTAGCGC
AGATGCAGCACGTCTTGGATGGAGGAGCCTTACTTCATAGAGTCCCTTGG
TCGAAAGGAACGCGATTCGACGAGGTTGCCAAAGCGTACGTCAGCTACGT
GAGGAGGCACTATGGCAAAGCGAGGATCGTTTTTGATGGATACGAGGACC
CCATGTCCATCAAAGCCAGTGAACACATTAGGAGGTCGTCAAAAGGATCT
TCGCGAAATATCAACGTCATACCTGATAACAATGTACCGTATTCAAAGGA
GAGATTCCTATCGAACAACCATAACAAAAGCCAACTTATCGATCTTCTAA
AACGTTCATTCCAAGCTGAAGGCCACACAGTAAAGGTCTGCAGAGGTGTT
GCTGACGCTTTGATAGTGAAAGATGCATTGGAATGTGCTGAGAGAAAAGA
CGTTGTCGTGGTAGCCGATGATACAGATGTTGCCGTCATGCTCCTTTACC
ACTGGAAAGAGAACCTACACGACATCTACCTATTGCAAGAAAATACTGGG
AAATGCTGGAGCATCAAACAATCTTCAAATAAAATCAAGGTATTACCAAA
ACTTCCTTATCCTATCTTCCAAACGCCTTTATAATGtattttactttgat
ttttctACTCACGTTCTAAAAGCCTCTTACACAAAATTAGTTAGTTTGCT
AAAAGATTTAGAACCTTTACGAGTCAGCCTCTGAAGAATTTTGTCAATTT
CCATTTTAGGACATCAAAGATCATCTCCTGTTCATCCACGCCTGGTCAGG
GTGTGACTCGACATCTGCGATTTATAACAAGGGGAAAACAAGCTTCCTCA
ATCTGGTTCGAAAGTCTAAGAAGATGCAATCTGCTGCAGAGATAATGACC
AATACTTGGACCGAAAAATCGAAGATCGGAGAAGTCTCAATCAGTATATT
TGTTGATTTGTACGGTGGAAAAGATCGATCTAGCTTGAGACAGCTACGGT
AGGATTTCAATTTAATTACGTAGTCAATCAGTTTAAGACAGgcatttaaa
aaagaaagaattatgACGAAAGAAATTGTTTCAGTTTTTACAAAGCTAAA
ATTTGATTTCTTCTTGAAATGATATTTCTAATTCTTGTCTTATGTTTCAG
CTATACCAAGTACAAGCAAATGCTCAGCGATGGATTGATTGAACCAGAGA
AACTTCCTCCGTCTGAAAGAAGCGCTTATTACCATGGGTTGAGAGTCCAT
CTTCAAATTATGCAATGGTTGTTGATGGACGAAGATGACACAACTTTCAA
GCCGATTGAATGGGGTTGGAATCAATCTGTTGGGTATCTATAGCCAACGG
CAACCGACAAACCGGTAGCTCCACCTGAAATTCTCCACATAATT Coding sequence (CDS) from alignment at sc0000261_pilon:37366..39259+ >XLOC_022281 ID=XLOC_022281|Name=XLOC_022281|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3144bp|location=Sequence derived from alignment at sc0000261_pilon:37366..39259+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTCCAACTCTCAGGAATTCAAACCGTTGCAAGCGACCAAAACATTGA
GATGGGCAAGAATCGAAGAAGCAAAGATAGTGAAGACTGTCAGAAGTTTT
TCGAATGGATCGAAGTCAGAAATCCCTTTAATATGGTCGATGATAACCTA
CACTCACTGTCAACCGGCTGTATATCCATCAAAGGAAAGGAGAAAGTCAA
TTGCGATGATGCCGAGAATGTCGGGAAGAAGATCCAAAGTCAATTGGATG
ATGTTGTTTTCACGGAGGCGAAATTCCTAAAAAAGGATCTTCTCGTGCCT
CTTGACCACCTAACCAATGAGCCACTTGATGTCGACAGCAAAGATCTAGT
CAGTGTCAACCCTACTCTCCTGTTCACCAGACTCGCAGCTATTGCAGAAC
GCGAAGAGAATGTTGAACAGTTTTTCGACTATGAGTTGAACCATCAGGCT
CTTTCcttgttcaaaaatggtctgatGAGAAAGCCTGATAAAGCTGCTTT
GAAGAAAAGCCTGTTACCCGAAAAAGATGCCACAACTATGAATGTAGCGC
AGATGCAGCACGTCTTGGATGGAGGAGCCTTACTTCATAGAGTCCCTTGG
TCGAAAGGAACGCGATTCGACGAGGTTGCCAAAGCGTACGTCAGCTACGT
GAGGAGGCACTATGGCAAAGCGAGGATCGTTTTTGATGGATACGAGGACC
CCATGTCCATCAAAGCCAGTGAACACATTAGGAGGTCGTCAAAAGGATCT
TCGCGAAATATCAACGTCATACCTGATAACAATGTACCGTATTCAAAGGA
GAGATTCCTATCGAACAACCATAACAAAAGCCAACTTATCGATCTTCTAA
AACGTTCATTCCAAGCTGAAGGCCACACAGTAAAGGTCTGCAGAGGTGTT
GCTGACGCTTTGATAGTGAAAGATGCATTGGAATGTGCTGAGAGAAAAGA
CGTTGTCGTGGTAGCCGATGATACAGATGTTGCCGTCATGCTCCTTTACC
ACTGGAAAGAGAACCTACACGACATCTACCTATTGCAAGAAAATACTGGG
AAATGCTGGAGCATCAAACAATCTTCAAATAAAATCAAGATGGTCCAACT
CTCAGGAATTCAAACCGTTGCAAGCGACCAAAACATTGAGATGGGCAAGA
ATCGAAGAAGCAAAGATAGTGAAGACTGTCAGAAGTTTTTCGAATGGATC
GAAGTCAGAAATCCCTTTAATATGGTCGATGATAACCTACACTCACTGTC
AACCGGCTGTATATCCATCAAAGGAAAGGAGAAAGTCAATTGCGATGATG
CCGAGAATGTCGGGAAGAAGATCCAAAGTCAATTGGATGATGTTGTTTTC
ACGGAGGCGAAATTCCTAAAAAAGGATCTTCTCGTGCCTCTTGACCACCT
AACCAATGAGCCACTTGATGTCGACAGCAAAGATCTAGTCAGTGTCAACC
CTACTCTCCTGTTCACCAGACTCGCAGCTATTGCAGAACGCGAAGAGAAT
GTTGAACAGTTTTTCGACTATGAGTTGAACCATCAGGCTCTTTCcttgtt
caaaaatggtctgatGAGAAAGCCTGATAAAGCTGCTTTGAAGAAAAGCC
TGTTACCCGAAAAAGATGCCACAACTATGAATGTAGCGCAGATGCAGCAC
GTCTTGGATGGAGGAGCCTTACTTCATAGAGTCCCTTGGTCGAAAGGAAC
GCGATTCGACGAGGTTGCCAAAGCGTACGTCAGCTACGTGAGGAGGCACT
ATGGCAAAGCGAGGATCGTTTTTGATGGATACGAGGACCCCATGTCCATC
AAAGCCAGTGAACACATTAGGAGGTCGTCAAAAGGATCTTCGCGAAATAT
CAACGTCATACCTGATAACAATGTACCGTATTCAAAGGAGAGATTCCTAT
CGAACAACCATAACAAAAGCCAACTTATCGATCTTCTAAAACGTTCATTC
CAAGCTGAAGGCCACACAGTAAAGGTCTGCAGAGGTGTTGCTGACGCTTT
GATAGTGAAAGATGCATTGGAATGTGCTGAGAGAAAAGACGTTGTCGTGG
TAGCCGATGATACAGATGTTGCCGTCATGCTCCTTTACCACTGGAAAGAG
AACCTACACGACATCTACCTATTGCAAGAAAATACTGGGAAATGCTGGAG
CATCAAACAATCTTCAAATAAAATCAAGGACATCAAAGATCATCTCCTGT
TCATCCACGCCTGGTCAGGGTGTGACTCGACATCTGCGATTTATAACAAG
GGGAAAACAAGCTTCCTCAATCTGGTTCGAAAGTCTAAGAAGATGCAATC
TGCTGCAGAGATAATGACCAATACTTGGACCGAAAAATCGAAGATCGGAG
AAGTCTCAATCAGTATATTTGTTGATTTGTACGGTGGAAAAGATCGATCT
AGCTTGAGACAGCTACGGACATCAAAGATCATCTCCTGTTCATCCACGCC
TGGTCAGGGTGTGACTCGACATCTGCGATTTATAACAAGGGGAAAACAAG
CTTCCTCAATCTGGTTCGAAAGTCTAAGAAGATGCAATCTGCTGCAGAGA
TAATGACCAATACTTGGACCGAAAAATCGAAGATCGGAGAAGTCTCAATC
AGTATATTTGTTGATTTGTACGGTGGAAAAGATCGATCTAGCTTGAGACA
GCTACGCTATACCAAGTACAAGCAAATGCTCAGCGATGGATTGATTGAAC
CAGAGAAACTTCCTCCGTCTGAAAGAAGCGCTTATTACCATGGGTTGAGA
GTCCATCTTCAAATTATGCAATGGTTGTTGATGGACGAAGATGACACAAC
TTTCAAGCCGATTGAATGGGGTTGGAATCAATCTGTTGGGTATCTATAGC
CAACGGCAACCGACAAACCGGTAGCTCCACCTGAAATTCTCCACATAATT
CTATACCAAGTACAAGCAAATGCTCAGCGATGGATTGATTGAACCAGAGA
AACTTCCTCCGTCTGAAAGAAGCGCTTATTACCATGGGTTGAGAGTCCAT
CTTCAAATTATGCAATGGTTGTTGATGGACGAAGATGACACAACTTTCAA
GCCGATTGAATGGGGTTGGAATCAATCTGTTGGGTATCTATAGCCAACGG
CAACCGACAAACCGGTAGCTCCACCTGAAATTCTCCACATAATT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000261_pilon | genome | sc0000261_pilon:37366..39259 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1330-1572:1652 |
| Aaloc | 1090-1326:1260 |
| Aaloc | 1-1089:1 |
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