XLOC_022274.3 (mRNA) -

Overview
NameXLOC_022274.3
Unique NameXLOC_022274.3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000306_pilon:349854..350473-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022274.3 ID=XLOC_022274.3|Name=XLOC_022274.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=620bp|location=Sequence derived from alignment at sc0000306_pilon:349854..350473- (Clytia hemisphaerica_ch_hm2_pilon)
AAACTCCTCCGCTCTGATGTATCCCTGGGTGAATTTTACGATGCCAAGAA
TGATCAATTTTTATCGGGCGTCTCTTTATGGTCTATGGAAGAGTTGGAAA
AACATCGAAAAAGAAGATTTGCTCGTCCTTCAACAAATTACCAATTTGAT
TCTGGCAAAACGGAGGATAGTCGAATGAACCTCATGGATATTGATGCTTC
ATTGAAACTAAGCTTTATGGGTAAGATTTATTATTACTAAAAGTAGATGG
GCCTTAAATTTCAAAACAAAGGCTGAATAAAGTCTAAACCAGGCTCTATC
CGATCTGTCAATTAAAATAAACTTATCGAGAACAAAAAAATTGCTTGCAA
AAACGAAAGTGGTGACACAGAGCATACAGAGCTATAGGATTTGGTTCATT
ATTGAGGTTATTTAAGGGTAGAATTAATTATAGAGAATCTTTTTCGCCAG
AATGACATCTTCTACAAAAATTGAATAATTTTGGTTATTATAATTTTTTT
TCAGGTGGTCTTATCGAAGTGTCCGGTAGTGCTCAGTATGTCCGACAATC
CGATGTGCTGACAACGGACGAAACATTCACACTGGCCTACAAATCCACTT
CATTTTACAATGTTTTACCG

Coding sequence (CDS) from alignment at sc0000306_pilon:349854..350473-

>XLOC_022274.3 ID=XLOC_022274.3|Name=XLOC_022274.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=672bp|location=Sequence derived from alignment at sc0000306_pilon:349854..350473- (Clytia hemisphaerica_ch_hm2_pilon)
AAACTCCTCCGCTCTGATGTATCCCTGGGTGAATTTTACGATGCCAAGAA
TGATCAATTTTTATCGGGCGTCTCTTTATGGTCTATGGAAGAGTTGGAAA
AACATCGAAAAAGAAGATTTGCTCGTCCTTCAACAAATTACCAATTTGAT
TCTGGCAAAACGGAGGATAGTCGAATGAACCTCATGGATATTGATGCTTC
ATTGAAACTAAGCTTTATGGAAACTCCTCCGCTCTGATGTATCCCTGGGT
GAATTTTACGATGCCAAGAATGATCAATTTTTATCGGGCGTCTCTTTATG
GTCTATGGAAGAGTTGGAAAAACATCGAAAAAGAAGATTTGCTCGTCCTT
CAACAAATTACCAATTTGATTCTGGCAAAACGGAGGATAGTCGAATGAAC
CTCATGGATATTGATGCTTCATTGAAACTAAGCTTTATGGGTGGTCTTAT
CGAAGTGTCCGGTAGTGCTCAGTATGTCCGACAATCCGATGTGCTGACAA
CGGACGAAACATTCACACTGGCCTACAAATCCACTTCATTTTACAATGTT
TTACCGGTGGTCTTATCGAAGTGTCCGGTAGTGCTCAGTATGTCCGACAA
TCCGATGTGCTGACAACGGACGAAACATTCACACTGGCCTACAAATCCAC
TTCATTTTACAATGTTTTACCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_022274.3XLOC_022274.3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000306_pilongenomesc0000306_pilon:349854..350473 -
Properties
Property NameValue
Aaloc223-336:115
Aaloc1-219:621