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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000331_pilon:298207..302161- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022183 ID=XLOC_022183|Name=XLOC_022183|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3955bp|location=Sequence derived from alignment at sc0000331_pilon:298207..302161- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGAGAATCAAAATGTTGACCCTGCAAATCAAGAGAAAGGTTTGTT
TCTCAAATATCCTTTACTTCACATGCATTTTATAAATATAAATTCAGATA
TTATTAAAATAATACTGTTTTCATTTTAAAAGTACTAAAAGCTGGGCACT
TTTTGGCATTAGCACAAAAATACCATTATCTTCGATTTTTTCCGTGTATT
TAAAAATATTACATTCTAGAAAATCTTTCAAGAAAGAAGAAAAGAGATGC
GGCTCTTAAAACTCTTAATGAGCTTTCAAAGAGAGCAACCAAGCAAGAAG
AAGCACTAGAAAAACTTCAAAACCTATCAAAGAAGCCAAAGAAAGAATCA
AGGCGTAACAAGAATAGAACGATCACTTTTAAAACCGATTCTTCTGGTAA
CAGGACTTACCCATACGGTGGTAGCAAACGACCAAAGAATAAAAAAGACA
CAAGTAAATTCATTTTCTTGATATTTTTATTGTCTGACAATCATTACTTT
AATAAATCATTATAAATTTTTACCTGTCCTCTAATCTATGTATCGTCATA
ACTGTACATCCAAAGAAATAATTCTCCAAAGATTAAAAATGAAACAATAG
AGAAAATATGCTTGCATTTAGGGTTGTTTTTTGTTTACAAAATAATGTAC
AAACACGCTCAGATGAATGTTGTTAGAATGTCTCATCAACAACTGACTTC
AGTTCATTTGAAGAATGATGTTTTCATGTTTTTTTTAATGTTACTATTTA
TTTTGTATTCATAGCTTCTAACGTCAACAGTTTTCAAGACACTTTTGCAT
CTGAGAATGAAGAAGATACCGTACCATACGAAGGTATAGAAATTATATTA
CATAAATTATAGGTTTGATAATAATAACAGTGAAGTAGACAAAACAATTA
TTTGCAATAATTAGGTTTTTAATAAACCGATTTTAATCAAGAATATATTT
AACTGTTGGGCTATTTTTGCGCCCTCATTACAAAAAGTTTGAGTTCAATC
CTTCTCTTGTTTTAGAAGCTACTACAACTAATCAAAGACTCTTGGACGTT
CTTAACATAAAGCTTCTTTCAAAACACAAAAAGAAGAAGAAGAACAACAG
CAAGAGCTGGAGCCAACGAGTGAACGCTTTAGAAGAGAAGTGGGAAGAAT
ACAGAGAGGAGATATTTACAGCCGTTGTGAGAAGCTATAACTTTGATGGA
ATCTGCCAGTCGTGCAAGATGAATGAAATTGCAGTCAAATGCGACGAGTG
CTTTACAAAAATGCTTTGCAATCAATGTGACAAACAAATACATGAAACAT
TGACATTGCATAATCGGACTTCTATCATCGATGGTTATAAACGTATACTG
ATGCCGTCTGAATTGGTCGAAGAGAATGATGTGTCAAATAAGGGCTGTAT
GTCATCAAACAAATTAATTCTTTTAACTAAAGTAGATACACATATTAACT
ATACAACTACTCACTTGAGTCTTCTCTAATGAATTTATGAATTTTTATGA
TTTATCATCATTTACAGGTCCAACTGTGCCATTGATGCCTACTAATTGTC
AATCGTGCAATAGCAGCAAAGTCGAGAGGCTACCAGGTGATTGTGTGGCT
GTTGTAACACTTTCAGGTAAGTAAATATTAGTTTCAGATCCTAATATAAC
ATTCATAACAGAACTTAAAGTGAACGATTGCTGATAAGAAAGAAGTGTTT
GCGCAGTCATTTATTATATCCCCAAAAAGCATCTTCAACTTTGACCAAAG
AATGCTTATCAAAAAATCAATAGATTCATGTTTTCATAGAAGATAATTTG
CACACAGCTATCAAAAAGGACATATGATTCACAACGAAAAACACGGGAAA
AGATCTCTTTTGAGATGAAAACATTAGAAATTATTTTATTCATCGTCAGT
CTTGTTTTTTTGGGGGTTTCCACTTTCATGAAATTCGTTTACAGTTTACA
GTCTTCTTTATTAATTGATGTAAGTCAAAACCACGTTCGCTTTTTGAATC
GAATTCGAAGAAGCCAATCCGTTTCCACGCTGACGTCAGCCAGCGTAAGT
TTCATTGTATACCATGGAAGTGCCACCTGGGGTCCCCTATTTATCGCTGC
AGTATTTCTTTAACCAACCCTGCATAAGATTAACGTTACATTTTTTTCAG
GCAAGTATTACCTCCATCTCTTCTCATTGAAATGTGAAGATTGCCAGACG
ACCACCAATCCTTTCACTTTGGACAGTGTCATAGAATCAGGATTTTGGCC
AAGTTCCCCAGTTAAATTCAGTTATCTTTTTAAAGTGGGTGTTTTTCGAT
TTTGGGACACACTGCGAAAAAATGCTCCTGGAACATCGGAAGCAGCATTT
GTCGAAGTGTTGAATACAATGAGGGCATTTCACGGAAGAGAAAATGTAAT
TTCTTTCATTAACTAATTTTTGAATTTTAATATAAACATCCCTTTTTCTG
GTGTTGATTTATTTAATTGGAATATCTATTTAAGCTGTTTTGTTATAGTT
GAAACACGCCTGTCTCAGTTACCCAATTTTAGGACTTTTTTGATGGGATG
AGCTTTCTTCTCACTTGGGAAAATGTTTTGCCAATTTTTACGTTGGGAAA
CAGTATACCAGGTTTTTCCTATAGGAATAAATTAGGAAATATTTTTTTAT
AAATACTGGTATGGAGTTTTGCAATGATTGTAATGCTATCTTTACCAAAA
ACTGATTTTTAATTTTACTATTGAGATTTATTTTCATTTTATAGATGGGA
AAAATAACCCCTACGATTTTCTCGACGTCATTTAAAGAATGGTGTTTTTG
TCAGCATCAAATCGAAAGAATCCAAAAGAAGAATTGGATGCAGTGTCCCT
CGTGCACTTTCGACCAGCATTCTTGTCACGTGGATGGGAATTGTAAACTT
TATCGCTACCGCAGTTCTAGGAGGTTCTTATACATCGATTTAAGTTTTCG
AATCATTTCTACAATGAATAAGCTATTTGGTGTATATTTCTTTCGAATTA
GATCATTTTACTCACTCTTATGTACTTGATTGTAGGGGGGTTCGACACTC
CGGTAGCAAATTCATAAAATGGGGGGTCGTAATTAAGGGATATCTGAGTG
ATTTTAGTGATTTTTTCTAGGAAAATGAAGTCATTATAAAGTGATTTTGG
GGTTTAAAAAATCGATAAAATGGAAAATTACCCCCCCCCCCACCTACAGT
TAAGCACAGAAGAGTAGCACAGTAATTTTATAATTTTAATGCTGAATTTC
GAATTTTTCAGACGCACAAGAAAGGAATTTTACAATGGTTTGTTCATTGC
TGAAGACAAGAAAGTTGGAAGTTTTATCAATGAAATATACAAAGGCAAAT
TTGGAAAGGTGAATCACTTTGTCATCACAAGATAGTAAAACTAAAAATAT
TTGAGTTATTCTTTAACAAGATGTCTTTTACGTATATATGTTTTCGCGAG
CCTTTAAAATAAAATGAATCTAGCTCCAAAACTGTCTTTTTTTAAGTCAT
AACAATTCAAAATACACATTCAAATAATGCACACAGCTAGCCAGCAACCA
TTTACCTTTTTCGACGATCAACTGATAAAACGTTCTTAACACGTTTAGGT
GGAAGCAGATTACATTTGTGGTGGAAAATGGAACGCTGCAAGAAACAACG
CACGCAAATATAAATCCCTTGACACAACTGGGCTTGAAGTGATGTCATGC
CGCCATCAGCTTGGGCAAAGAGCTCTTAATATGAAGCAAGGGGAATTATA
CGGATACCCATTATACCTGATAAAGGAGCACATCAACACAAGAGATATCA
AGTTCGTTTTTGCTGACGTGATGTGCAAGCTATCGAAGTTTATCCAACGC
GTTGATGCCGAAACAGCCAAAGCTTTCAAAGGAGCTTTGTCTGTGATGCA
CGCCAAAGGCCACGGAATAGACTGTCAAGTATTTATTCATTTAGATGATT
TAAGC Coding sequence (CDS) from alignment at sc0000331_pilon:298207..302161- >XLOC_022183 ID=XLOC_022183|Name=XLOC_022183|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3408bp|location=Sequence derived from alignment at sc0000331_pilon:298207..302161- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGAGAATCAAAATGTTGACCCTGCAAATCAAGAGAAAGATGATGG
AGAATCAAAATGTTGACCCTGCAAATCAAGAGAAAGAAAATCTTTCAAGA
AAGAAGAAAAGAGATGCGGCTCTTAAAACTCTTAATGAGCTTTCAAAGAG
AGCAACCAAGCAAGAAGAAGCACTAGAAAAACTTCAAAACCTATCAAAGA
AGCCAAAGAAAGAATCAAGGCGTAACAAGAATAGAACGATCACTTTTAAA
ACCGATTCTTCTGGTAACAGGACTTACCCATACGGTGGTAGCAAACGACC
AAAGAATAAAAAAGACACAAAAAATCTTTCAAGAAAGAAGAAAAGAGATG
CGGCTCTTAAAACTCTTAATGAGCTTTCAAAGAGAGCAACCAAGCAAGAA
GAAGCACTAGAAAAACTTCAAAACCTATCAAAGAAGCCAAAGAAAGAATC
AAGGCGTAACAAGAATAGAACGATCACTTTTAAAACCGATTCTTCTGGTA
ACAGGACTTACCCATACGGTGGTAGCAAACGACCAAAGAATAAAAAAGAC
ACAACTTCTAACGTCAACAGTTTTCAAGACACTTTTGCATCTGAGAATGA
AGAAGATACCGTACCATACGAAGCTTCTAACGTCAACAGTTTTCAAGACA
CTTTTGCATCTGAGAATGAAGAAGATACCGTACCATACGAAGAAGCTACT
ACAACTAATCAAAGACTCTTGGACGTTCTTAACATAAAGCTTCTTTCAAA
ACACAAAAAGAAGAAGAAGAACAACAGCAAGAGCTGGAGCCAACGAGTGA
ACGCTTTAGAAGAGAAGTGGGAAGAATACAGAGAGGAGATATTTACAGCC
GTTGTGAGAAGCTATAACTTTGATGGAATCTGCCAGTCGTGCAAGATGAA
TGAAATTGCAGTCAAATGCGACGAGTGCTTTACAAAAATGCTTTGCAATC
AATGTGACAAACAAATACATGAAACATTGACATTGCATAATCGGACTTCT
ATCATCGATGGTTATAAACGTATACTGATGCCGTCTGAATTGGTCGAAGA
GAATGATGTGTCAAATAAGGGCTAAGCTACTACAACTAATCAAAGACTCT
TGGACGTTCTTAACATAAAGCTTCTTTCAAAACACAAAAAGAAGAAGAAG
AACAACAGCAAGAGCTGGAGCCAACGAGTGAACGCTTTAGAAGAGAAGTG
GGAAGAATACAGAGAGGAGATATTTACAGCCGTTGTGAGAAGCTATAACT
TTGATGGAATCTGCCAGTCGTGCAAGATGAATGAAATTGCAGTCAAATGC
GACGAGTGCTTTACAAAAATGCTTTGCAATCAATGTGACAAACAAATACA
TGAAACATTGACATTGCATAATCGGACTTCTATCATCGATGGTTATAAAC
GTATACTGATGCCGTCTGAATTGGTCGAAGAGAATGATGTGTCAAATAAG
GGCTGTCCAACTGTGCCATTGATGCCTACTAATTGTCAATCGTGCAATAG
CAGCAAAGTCGAGAGGCTACCAGGTGATTGTGTGGCTGTTGTAACACTTT
CAGGTCCAACTGTGCCATTGATGCCTACTAATTGTCAATCGTGCAATAGC
AGCAAAGTCGAGAGGCTACCAGGTGATTGTGTGGCTGTTGTAACACTTTC
AGGCAAGTATTACCTCCATCTCTTCTCATTGAAATGTGAAGATTGCCAGA
CGACCACCAATCCTTTCACTTTGGACAGTGTCATAGAATCAGGATTTTGG
CCAAGTTCCCCAGTTAAATTCAGTTATCTTTTTAAAGTGGGTGTTTTTCG
ATTTTGGGACACACTGCGAAAAAATGCTCCTGGAACATCGGAAGCAGCAT
TTGTCGAAGTGTTGAATACAATGAGGGCATTTCACGGAAGAGAAAATGCA
AGTATTACCTCCATCTCTTCTCATTGAAATGTGAAGATTGCCAGACGACC
ACCAATCCTTTCACTTTGGACAGTGTCATAGAATCAGGATTTTGGCCAAG
TTCCCCAGTTAAATTCAGTTATCTTTTTAAAGTGGGTGTTTTTCGATTTT
GGGACACACTGCGAAAAAATGCTCCTGGAACATCGGAAGCAGCATTTGTC
GAAGTGTTGAATACAATGAGGGCATTTCACGGAAGAGAAAATATGGGAAA
AATAACCCCTACGATTTTCTCGACGTCATTTAAAGAATGGTGTTTTTGTC
AGCATCAAATCGAAAGAATCCAAAAGAAGAATTGGATGCAGTGTCCCTCG
TGCACTTTCGACCAGCATTCTTGTCACGTGGATGGGAATTGTAAACTTTA
TCGCTACCGCAGTTCTAGGAGATGGGAAAAATAACCCCTACGATTTTCTC
GACGTCATTTAAAGAATGGTGTTTTTGTCAGCATCAAATCGAAAGAATCC
AAAAGAAGAATTGGATGCAGTGTCCCTCGTGCACTTTCGACCAGCATTCT
TGTCACGTGGATGGGAATTGTAAACTTTATCGCTACCGCAGTTCTAGGAG
ACGCACAAGAAAGGAATTTTACAATGGTTTGTTCATTGCTGAAGACAAGA
AAGTTGGAAGTTTTATCAATGAAATATACAAAGGCAAATTTGGAAAGACG
CACAAGAAAGGAATTTTACAATGGTTTGTTCATTGCTGAAGACAAGAAAG
TTGGAAGTTTTATCAATGAAATATACAAAGGCAAATTTGGAAAGGTGGAA
GCAGATTACATTTGTGGTGGAAAATGGAACGCTGCAAGAAACAACGCACG
CAAATATAAATCCCTTGACACAACTGGGCTTGAAGTGATGTCATGCCGCC
ATCAGCTTGGGCAAAGAGCTCTTAATATGAAGCAAGGGGAATTATACGGA
TACCCATTATACCTGATAAAGGAGCACATCAACACAAGAGATATCAAGTT
CGTTTTTGCTGACGTGATGTGCAAGCTATCGAAGTTTATCCAACGCGTTG
ATGCCGAAACAGCCAAAGCTTTCAAAGGAGCTTTGTCTGTGATGCACGCC
AAAGGCCACGGAATAGACTGTCAAGTATTTATTCATTTAGATGATTTAAG
CGTGGAAGCAGATTACATTTGTGGTGGAAAATGGAACGCTGCAAGAAACA
ACGCACGCAAATATAAATCCCTTGACACAACTGGGCTTGAAGTGATGTCA
TGCCGCCATCAGCTTGGGCAAAGAGCTCTTAATATGAAGCAAGGGGAATT
ATACGGATACCCATTATACCTGATAAAGGAGCACATCAACACAAGAGATA
TCAAGTTCGTTTTTGCTGACGTGATGTGCAAGCTATCGAAGTTTATCCAA
CGCGTTGATGCCGAAACAGCCAAAGCTTTCAAAGGAGCTTTGTCTGTGAT
GCACGCCAAAGGCCACGGAATAGACTGTCAAGTATTTATTCATTTAGATG
ATTTAAGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000331_pilon | genome | sc0000331_pilon:298207..302161 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1348-1704:358 |
| Aaloc | 1252-1347:694 |
| Aaloc | 1072-1248:1212 |
| Aaloc | 829-1071:1804 |
| Aaloc | 730-825:2437 |
| Aaloc | 349-726:2939 |
| Aaloc | 280-345:3190 |
| Aaloc | 46-276:3735 |
| Aaloc | 1-42:3956 |
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