|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000663_pilon:33367..36988+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022140.2 ID=XLOC_022140.2|Name=XLOC_022140.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3622bp|location=Sequence derived from alignment at sc0000663_pilon:33367..36988+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGCAAATCACAAACAAAAGGATTTGTCATTATTGCCAAACAATTCT
ATTTTTTTACCCTTTTGAGCAACTCAAAGACTCAGAATTTTTTTACTGTC
CACATTGCAAAGAAGATACTGGGAAAAATGTACCATTAGACCCATCACTA
GGAACAGAATGGGAATATGCTGAATCATCAGGCAAAGAACCTAGATTGAT
TTGGGACATATTTTGGTATTGTGCTCTAGTTGGTAAGATAACCAAGTGTT
GTAATGGGCATTCAATTACATCGTATCACCCTGGAATTTTGCAACAAATT
TCAAACTACCTATTCTTACTTTCTCACAAGCGTGGAATGACTAAGTCAAC
ATATGACCTGATAATCCGTTTAGTTGAACAAGTCAACAATTTTAGTAGCA
TTGAAAGTATATTTCTTAGCAGTTTCGTCGATATCGTCCATCGAAAACTA
GCTCTAATCAACAACACCAACATGCAGACATCTATTGAATTCATTGAACA
ACTGAAGCTGTTTACTCCATCACATGATTTTATCACTTCTTGTTTTGTTT
TCAATTTTGATAACTACAAAGATGTTTATCTTTCTGAAATGGATAAACTC
ACCTTCATTTGGCTTTCAGGAGACCACACGTTTCGTGTGGCTGCGAATAT
AGGTAAGTAGCAAAAGTTACAAAGAAAGGGGTAGCATTTTCACATTGGGG
GATGCCAAGAAGGGGGGGGTACGGAAAAGTGGTTTGTCGGTTTCAGCCTT
ATTTTTGTCGGTTATCGGTGAACGGAAAACATTACGGTGTCGATGATTGA
GCTTTTTTGTTCGGTTAATCGGTGAGTGGATCGATATTCAAGCGGTTTTC
GGTGACAAGTTAAGTATAATGGTTTTGGAGAAATAAATTATCCCAAGAAT
CAAAAAGTAAATTAACTACTACATGTAATTTTTCTTTGCTCGCTTCGCTT
GCATAAAATACTGTATCAGTGACCAATTGAGTCTTTCAGATTTCAAGAGT
GCATAAATGACCTTTGTTACAGGAAAACTTGGAATAATTCTGCTAGATTT
AGTAGCAGTATTGGGGAACTGCCAGCGGCGGCCGATTTTTCTATGGAGGG
GGACAAGGGGCACCAAAAGGCGCCTCTGACATAGGGTCCACCCCCCCAGA
GATTTGGGGGTACCTAAAAAGAAAATTCTAAACTTTAAGGGGTACCTTGA
AGTATTCCCAAATTTAGAAGGTATCTGATATATTTGGGGGTATCTGTAAT
CTCGTAAGTGGGGGCGGGGGCTGTTCTTTCTGTACGAAGTATTTTCCTTG
GCTCAACCAATTTTCCAATTTTCAATCAAACCTTTTCATTGAGAAGACTT
TATAACTTATGTCTTTCCCTTTTCATCCAGTTTTCTTCTCTTACATTGAC
GAATGAGCATAAAATCCTTTATATTGCATTTAACAATAAAAAAGGGGGTA
ACTCAAAGTTGGGGGGCTAAGTTTAGAATTCTAAAAATTTTGGGGGTACC
AAAATGATTGGAGGTACCTGAACCCTGGAGGACCCTATGTCTGATTGCTA
ATTTTGGCGCCTCTTTGCTGTTATAAACCCTAAAATTAGCAGTTTTCAGC
CAAAAAGAGGAAAAATATCCAAAGATTTCGCTGATTTTCGCTGATTTCGC
TTGCGTAAGCTTTCCAAATATCTTTTTCTTAATAAGGGGGCGCCAAAATA
CTAACTCTTGAAAATTACTTCCTTACTTTGCCCAAATATTGGTTGATCAA
CCACGCTACTGTTTAGCAGCCCCAAAAAGATGCTCTTTCTAGGCACCAAA
TCTTAGAGATCTCAATCAATCAATATTAGGCTATGCTCATCCTCTAAGGA
AAAGGTTTCTTATATGATCCCTATATGATGCAGAATAGACGTCTGCGAAA
AAGAATAATACAATCAAAATAAGTCTGTTAATGTTTTTTCAACATTCTCG
ACTGGACCCAACTTTTCTTTACCTTTGAATTGTAGAGTCAATTTAGTGAA
TGCTTTGGGCAGAAAACCGTTGACTCGTTAATTGTTAATCAGGGACTGCG
CCTTGTGAAGAAAACAAGAATTTTTTAAATTAAAGACCAAGGGCATTATT
TTGGGGCAAATTGAGTCTGAAACAGGGCTATTTTGAGCCCATTAGGGAGT
CAAAATCCAAAATTTCCTCCTCCTTAGTTTGGCCACTTTACTATCAAAAT
CAAGGGAAGGGCCCTGTTGATCTGATTCATTAGATGATAGATCTTTTCAA
TCCACGGCTTTGGTCTTAAGGAATTTTTAAAACTGAAAAGTTTCATGTCA
GCGCAAACTCTGTTTGCGCCTTTCCTTACCAATACTAGATATTTGACAAC
TATTTGCCATCATACGCATCATATATCATAACTTAATTATTAGCAGCTCA
AGACTTCATAGCCATGTATACAATGATGCTAGTATTTGAAGGGAAGCTGA
ACGGCTGAACGGCCCGCTGAACACCACGGATGCCAAACTTATGGTTTTCA
ACTCAAAAAATTATTTTAGGCAAAGTGGCTTTGGATGGGGTCCATATCAA
CTCCAATATCAATGATTAAAAAAGGCTTCTGGAGCAAGAAGGAAAAATTG
GTGTCGGTGAAAAGGATAAATTCTGTCGGTTTATCGATGATAGTAGAGCA
ATTTTTGAGCGGTTTATCGGTTTTCGAAAGTCCTGTACGCCCCCCCTCAC
AAGAAGAGGGTCCTGAGGGGGGGTTTCCGGACCCCCAGGAAACTATGTTT
TCCTAAGAAATCTCACCACAGCAAATTTGCTGCCATAATTTTGCATATAA
TCCAAGATGGCGGACAAAAAGCGAAAAGGTCCATGTAATATGATATTTTT
ATATATCTTTTTCTAAATTCCCTTTACAGGCATGTACAAAGACAGAAGGT
GGATCAAACTGTTTGACTCTTTATTTTGTGTTCTCAATGAAAAAGGTCAG
GTAATGGGTTTCAGACTGGTTAAAGGAACTAAATTTGACCTTGTTTATGA
CATTTTCAAAAAACTGGCAGAGAAAGGAACCACGCCACACTTTATTATCA
TTGACAACTGTTGTTTATGGGTAAACAAATTGAATGAATTATTCCCTGGT
GTTGCTGTTAAACTAGATCTGTTTCATGCCATAGCGAGATTAACCGGACA
GGTTTAAAAAAAACACCCATTGTTTTTTGACTTTGTAAAAGAACTGGGAC
TAATATTTCGAGAAATTTCAGATTTTGGAGAGGTAAGGAAATTGCCTACT
CCAAAGCCAAATGTGATTTTAGAAAATCTTGAAAGGTTCATCTTGAAATG
GTCAGATGTCAGTTTCAAAGGTTGGTTTATTCTGACTCCATCCTTTAGTA
TGGAAATTGAAAAGCTTAAGAAACATATTAACTTAGGGTGTTGCTCTGAT
ATTCCACCTGGTGGTGGCACAAACAAAAATGAAAATCTACATAAACAGCT
GAAATGCTTAGTTTGTAGAGGAAAAATGAAAACTGAGACGGCAACTGCAA
TTTTCTCTCATTTGTTTTACATCCACAATTCTAAGAAGAATGGGGAAAAG
TATGTACACCCTATATTCTCTAAGGGTGAACCAAGAACGTTGCCGGGAAG
TGCATCCACGTTGGTCATCAAT Coding sequence (CDS) from alignment at sc0000663_pilon:33367..36988+ >XLOC_022140.2 ID=XLOC_022140.2|Name=XLOC_022140.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1542bp|location=Sequence derived from alignment at sc0000663_pilon:33367..36988+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGCAAATCACAAACAAAAGGATTTGTCATTATTGCCAAACAATTCT
ATTTTTTTACCCTTTTGAGCAACTCAAAGACTCAGAATTTTTTTACTGTC
CACATTGCAAAGAAGATACTGGGAAAAATGTACCATTAGACCCATCACTA
GGAACAGAATGGGAATATGCTGAATCATCAGGCAAAGAACCTAGATTGAT
TTGGGACATATTTTGGTATTGTGCTCTAGTTGGTAAGATAACCAAGTGTT
GTAATGGGCATTCAATTACATCGTATCACCCTGGAATTTTGCAACAAATT
TCAAACTACCTATTCTTACTTTCTCACAAGCGTGGAATGACTAAGTCAAC
ATATGACCTGATAATCCGTTTAGTTGAACAAGTCAACAATTTTAGTAGCA
TTGAAAGTATATTTCTTAGCAGTTTCGTCGATATCGTCCATCGAAAACTA
GCTCTAATCAACAACACCAACATGCAGACATCTATTGAATTCATTGAACA
ACTGAAGCTGTTTACTCCATCACATGATTTTATCACTTCTTGTTTTGTTT
TCAATTTTGATAACTACAAAGATGTTTATCTTTCTGAAATGGATAAACTC
ACCTTCATTTGGCTTTCAGGAGACCACACGTTTCGTGTGGCTGCGAATAT
AGATGAGGCAAATCACAAACAAAAGGATTTGTCATTATTGCCAAACAATT
CTATTTTTTTACCCTTTTGAGCAACTCAAAGACTCAGAATTTTTTTACTG
TCCACATTGCAAAGAAGATACTGGGAAAAATGTACCATTAGACCCATCAC
TAGGAACAGAATGGGAATATGCTGAATCATCAGGCAAAGAACCTAGATTG
ATTTGGGACATATTTTGGTATTGTGCTCTAGTTGGTAAGATAACCAAGTG
TTGTAATGGGCATTCAATTACATCGTATCACCCTGGAATTTTGCAACAAA
TTTCAAACTACCTATTCTTACTTTCTCACAAGCGTGGAATGACTAAGTCA
ACATATGACCTGATAATCCGTTTAGTTGAACAAGTCAACAATTTTAGTAG
CATTGAAAGTATATTTCTTAGCAGTTTCGTCGATATCGTCCATCGAAAAC
TAGCTCTAATCAACAACACCAACATGCAGACATCTATTGAATTCATTGAA
CAACTGAAGCTGTTTACTCCATCACATGATTTTATCACTTCTTGTTTTGT
TTTCAATTTTGATAACTACAAAGATGTTTATCTTTCTGAAATGGATAAAC
TCACCTTCATTTGGCTTTCAGGAGACCACACGTTTCGTGTGGCTGCGAAT
ATAGGCATGTACAAAGACAGAAGGTGGATCAAACTGTTTGACTCTTTATT
TTGTGTTCTCAATGAAAAAGGTCAGGCATGTACAAAGACAGAAGGTGGAT
CAAACTGTTTGACTCTTTATTTTGTGTTCTCAATGAAAAAGGTCAGGGTG
AACCAAGAACGTTGCCGGGAAGTGCATCCACGTTGGTCATCAATGGTGAA
CCAAGAACGTTGCCGGGAAGTGCATCCACGTTGGTCATCAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000663_pilon | genome | sc0000663_pilon:33367..36988 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 724-771:3575 |
| Aaloc | 655-723:2882 |
| Aaloc | 1-651:1 |
|
