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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000146_pilon:14869..18491- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022140 ID=XLOC_022140|Name=XLOC_022140|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3623bp|location=Sequence derived from alignment at sc0000146_pilon:14869..18491- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGCAAATCACAAACAAAAGGATTTGTCATTATTGCCAAACAATTCT
ATTTTTTTACCCTTTTGAGCAACTCAAAGACTCAGAATTTTTTTACTGTC
CACATTGCAAAGAAGATACTGGGAAAAATGTACCATTAGACCCATCACTA
GGAACAGAATGGGAATATGCTGAATCATCAGGCAAAGAACCTAGATTGAT
TTGGGACATATTTTGGTATTGTGCTCTAGTTGGTAAGATAACCAAGTGTT
GTAATGGGCATTCAATTACATCGTATCACCCTGGAATTTTGCAACAAATT
TCAAACTACCTATTCTTACTTTCTCACAAGCGTGGAATGACTAAGTCAAC
ATATGACCTGATAATCCGTTTAGTTGAACAAGTCAACAATTTTAGTAGCA
TTGAAAGTATATTTCTTAGCAGTTTCGTCGATATCGTCCATCGAAAACTA
GCTCTAATCAACAACACCAACATGCAGACATCTATTGAATTCATTGAACA
ACTGAAGCTGTTTACTCCATCACATGATTTTATCACTTCTTGTTTTGTTT
TCAATTTTGATAACTACAAAGATGTTTATCTTTCTGAAATGGATAAACTC
ACCTTCATTTGGCTTTCAGGAGACCACACGTTTCGTGTGGCTGCGAATAT
AGGTAAGTAGCAAAAGTTACAAAGAAAGGGGTAGCATTTTCACATTGGGG
GATGCCAAGAAGGGGGGGGTACGGAAAAGTGGTTTGTCGGTTTCAGCCTT
ATTTTTGTCGGTTATCGGTGAACGGAAAACATTACGGTGTCGATGATTGA
GCTTTTTTGTTCGGTTAATCGGTGAGTGGATCGATATTCAAGCGGTTTTC
GGTGACAAGTTAAGTATAATGGTTTTGGAGAAATAAATTATCCCAAGAAT
CAAAAAGTAAATTAACTACTACATGTAATTTTTCTTTGCTCGCTTCGCTT
GCATAAAATACTGTATCAGTGACCAATTGAGTCTTTCAGATTTCAAGAGT
GCATAAATGACCTTTGTTACAGGAAAACTTGGAATAATTCTGCTAGATTT
AGTAGCAGTATTGGGGAACTGCCAGCGGCGGCCGATTTTTCTATGGAGGG
GGACAAGGGGCACCAAAAGGCGCCTCTGACATAGGGTCCACCCCCCCAGA
GATTTGGGGGTACCTAAAAAGAAAATTCTAAACTTTAAGGGGTACCTTGA
AGTATTCCCAAATTTAGAAGGTATCTGATATATTTGGGGGTATCTGTAAT
CTCGTAAGTGGGGGCGGGGGCTGTTCTTTCTGTACGAAGTATTTTCCTTG
GCTCAACCAATTTTCCAATTTTCAATCAAACCTTTTCATTGAGAAGACTT
TATAACTTATGTCTTTCCCTTTTCATCCAGTTTTCTTCTCTTACATTGAC
GAATGAGCATAAAATCCTTTATATTGCATTTAACAATAAAAAAGGGGGTA
ACTCAAAGTTGGGGGGCTAAGTTTAGAATTCTAAAAATTTTGGGGGTACC
AAAATGATTGGAGGTACCTGAACCCTGGAGGACCCTATGTCTGATTGCTA
ATTTTGGCGCCTCTTTGCTGTTATAAACCCTAAAATTAGCAGTTTTCAGC
CAAAAAGAGGAAAAATATCCAAAGATTTCGCTGATTTTCGCTGATTTCGC
TTGCGTAAGCTTTCCAAATATCTTTTTCTTAATAAGGGGGCGCCAAAATA
CTAACTCTTGAAAATTACTTCCTTACTTTGCCCAAATATTGGTTGATCAA
CCACGCTACTGTTTAGCAGCCCCAAAAAGATGCTCTTTCTAGGCACCAAA
TCTTAGAGATCTCAATCAATCAATATTAGGCTATGCTCATCCTCTAAGGA
AAAGGTTTCTTATATGATCCCTATATGATGCAGAATAGACGTCTGCGAAA
AAGAATAATACAATCAAAATAAGTCTGTTAATGTTTTTTCAACATTCTCG
ACTGGACCCAACTTTTCTTTACCTTTGAATTGTAGAGTCAATTTAGTGAA
TGCTTTGGGCAGAAAACCGTTGACTCGTTAATTGTTAATCAGGGACTGCG
CCTTGCGAAGAAAACAGGAATTTTTTAAATTAAAGACCAAGGGCATCATT
TTGGGGCAAATTGAGTCTGAAACAGGGCTATTTTGAGCACATTAGGGAGT
CAAAATCCAAAATTTCCTCCTCCTTAGTTTGGCCACTTTACTATCAAAAT
CAAGGGAAGGGCCCTGTTGATCTGATTCATTAGATGATAGATCTTTTTAA
GCCACGGCTTTGGTCTTAAGGAATTTTTGAAACTGAAAAGTTTCATGTCA
GCGCAAACTCTGTTTGCGCCTTTCCTTACCAATACTAGATATTTGACAAC
TATTTGCCATCATACGCATCATATATCATAACTTAATTATTAGCAGCTCA
AGACTTCATAGCCATGTATACAATGATGCTAGTATTTGAAGGGAAGCTGA
ACGGCTGAACGGCCCGCTGAAAACCACGGATGCCAAACTTATGGTTTTCA
ACTCAAAAAATTATTTTAGGCAAAGTGGCTTTGGATGGGGTCCATATCAT
CTACAATATCAATGATTAAAAAAGGCTTCTGGAGCAAGAAGGAAAAATCG
GTGTCGGTGAAAAGGATAAATTCTGTCGGTTTATCGGTGAGAGTAGAGCA
ATTTTTGAGCGGTTTATCGGTTTTCGAAAGTCCTGTACGCCCCCCTCACA
AGAAGAGGGTCCTGAGGGGGGGGGGTTTCCGGACCCCCAGGAAACTATGT
TTTCCTAAGAAATCTCACCACAGCAAATGTGCTGCCAAAATTTTGTATAT
AATCCAAGATGGCGGACAAAAAGCGAAAAGGTCCATGTAATATGATATTT
TTATATATCTTTTTCTAAATTCCCTTTACAGGCATGTACAAAGACAGAAG
GTGGATCAAACTGTTTGACTCTTTATTTTGTGTTCTCAATGAAAAAGGTC
AGGTAATGGGTTTCAGACTGGTTAAAGGAACTAAATTTGACCTTGTTTAT
GACATTTTCAAAAAACTGGCTGAGAACGAACCACGCCACACTTTATTATC
ATTGACAACTGTTGTTTATGGGTAAACAAATTAAATGAATTATTCCCTGG
TGTTGCTGTTAAACTAGATCTGTTTCATGCCATAGCGAGATTAACCGGAC
AGGTTTAAAAAAAACACCCATTGTTTTTTGACTTTGTAAAAGAACTGGGA
CTAATATTCCGAGAAATTTCAGATTTTGGAGAGGTAAGGAAATTGCCTAC
TCCAAAGCCAAATGTGATTTTAGAAAATCTTGAAAGGTTCATCTTGAAAT
GGTCAGATGTCAGTTTCAAAGGTTGGTTTATTCTGACTCCATCCTTTAGT
ATGGAAATTGAAAAGCTTAAGAAACATATTAACTTAGGGTGTTGCTCTGA
TATTCCACCTGGTGGTGGCACAAACAAAAATGAAAATCTACATAAACAGC
TGAAATGCTTAGTTTGTAGAGGAAAAATGAAAACTGAGACGGCAACTGCA
ATTTTCTCTCATTTGTTTTACATCCACAATTCTAAGAAGAATGGGGAAAA
GTATGTACACCCTATATTCTCTAAGGGTGAACCAAGAACGTTGCCGGGAA
GTGCATCCACGTTGGTCATCAAT Coding sequence (CDS) from alignment at sc0000146_pilon:14869..18491- >XLOC_022140 ID=XLOC_022140|Name=XLOC_022140|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1542bp|location=Sequence derived from alignment at sc0000146_pilon:14869..18491- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGCAAATCACAAACAAAAGGATTTGTCATTATTGCCAAACAATTCT
ATTTTTTTACCCTTTTGAGCAACTCAAAGACTCAGAATTTTTTTACTGTC
CACATTGCAAAGAAGATACTGGGAAAAATGTACCATTAGACCCATCACTA
GGAACAGAATGGGAATATGCTGAATCATCAGGCAAAGAACCTAGATTGAT
TTGGGACATATTTTGGTATTGTGCTCTAGTTGGTAAGATAACCAAGTGTT
GTAATGGGCATTCAATTACATCGTATCACCCTGGAATTTTGCAACAAATT
TCAAACTACCTATTCTTACTTTCTCACAAGCGTGGAATGACTAAGTCAAC
ATATGACCTGATAATCCGTTTAGTTGAACAAGTCAACAATTTTAGTAGCA
TTGAAAGTATATTTCTTAGCAGTTTCGTCGATATCGTCCATCGAAAACTA
GCTCTAATCAACAACACCAACATGCAGACATCTATTGAATTCATTGAACA
ACTGAAGCTGTTTACTCCATCACATGATTTTATCACTTCTTGTTTTGTTT
TCAATTTTGATAACTACAAAGATGTTTATCTTTCTGAAATGGATAAACTC
ACCTTCATTTGGCTTTCAGGAGACCACACGTTTCGTGTGGCTGCGAATAT
AGATGAGGCAAATCACAAACAAAAGGATTTGTCATTATTGCCAAACAATT
CTATTTTTTTACCCTTTTGAGCAACTCAAAGACTCAGAATTTTTTTACTG
TCCACATTGCAAAGAAGATACTGGGAAAAATGTACCATTAGACCCATCAC
TAGGAACAGAATGGGAATATGCTGAATCATCAGGCAAAGAACCTAGATTG
ATTTGGGACATATTTTGGTATTGTGCTCTAGTTGGTAAGATAACCAAGTG
TTGTAATGGGCATTCAATTACATCGTATCACCCTGGAATTTTGCAACAAA
TTTCAAACTACCTATTCTTACTTTCTCACAAGCGTGGAATGACTAAGTCA
ACATATGACCTGATAATCCGTTTAGTTGAACAAGTCAACAATTTTAGTAG
CATTGAAAGTATATTTCTTAGCAGTTTCGTCGATATCGTCCATCGAAAAC
TAGCTCTAATCAACAACACCAACATGCAGACATCTATTGAATTCATTGAA
CAACTGAAGCTGTTTACTCCATCACATGATTTTATCACTTCTTGTTTTGT
TTTCAATTTTGATAACTACAAAGATGTTTATCTTTCTGAAATGGATAAAC
TCACCTTCATTTGGCTTTCAGGAGACCACACGTTTCGTGTGGCTGCGAAT
ATAGGCATGTACAAAGACAGAAGGTGGATCAAACTGTTTGACTCTTTATT
TTGTGTTCTCAATGAAAAAGGTCAGGCATGTACAAAGACAGAAGGTGGAT
CAAACTGTTTGACTCTTTATTTTGTGTTCTCAATGAAAAAGGTCAGGGTG
AACCAAGAACGTTGCCGGGAAGTGCATCCACGTTGGTCATCAATGGTGAA
CCAAGAACGTTGCCGGGAAGTGCATCCACGTTGGTCATCAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000146_pilon | genome | sc0000146_pilon:14869..18491 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 724-771:49 |
| Aaloc | 655-723:741 |
| Aaloc | 1-651:3624 |
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