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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000353_pilon:320325..327352- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022118 ID=XLOC_022118|Name=XLOC_022118|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7028bp|location=Sequence derived from alignment at sc0000353_pilon:320325..327352- (Clytia hemisphaerica_ch_hm2_pilon)
GACACAAGAAGGGCAAAAAAGAGAAGAAACTCGTCATTGGTTAGTACTAG
AAGAAACTCATCAACAACGACAACTAAAGGTATGCATTTTAACCTTCCTT
TCTTCTGTTATATTTATCTCTCAAACTAATGCTTTTATAAGCTTTAAGCA
AACAATTATCTGCTACTGCTGTTGAGACATATCAATGAGACACATCTACA
CATATTCTGACACATACAGGTTTTTGTTACTATACCTATTTTTTAGGTAT
TGACCTTGGACCCATACGGTTTGAAGATTCAGAAGGTGAGCCTTTGGGAG
TAATGATTACGAGGGTTGTCAATGATTATAGCAGGCCACAAAGATGGATG
ATGGACAAATTTTCCACTAGACTTTTTTAATAGTAAAAGAAAAAATCCCC
AACACAAAATATGAATATACAAATTATGTATACAATTGCATCACATATGT
CTGCATATGTTCCTAATTTTGATGCTAATATAAGAAAACTGTACGTAAAT
AAACTTGAAACTTGTGGACAACCTGTAGATTATTAAATATCCTCCAGGTT
TTTCAATAAAATTTTTTTCTTTTTTGTTTAGATTCTTCACATAGTCAAAA
TTCTAATCAATCCGGAAGAAGTAACCAAAATGAGACTCAACATAAAAAGC
AGCCTAGTAAGTCTAACTTGAGACATAATTGCGCCGTCAGTGGAGACTTT
TGTAAAAACTCAAATTCATATATTAAATTCCTCTTAACTCATTTCTACAT
CAAAATGTCAATGTGGACTTTTCTAGAACTCAAATTCATACCCTCCAGGT
TTTAGAATGAACATTTTTCTTTATTCTTTAGATTCTTCTCATATAAGTCA
AAATTCTAATCAATCAACACTAACACAATCACTTAGTCCAAGTCAAATGG
TTCCAAGTAATAACCAAAATGATGAATCCGGAAGAAGTAACCAAAATGAG
ACTCAACATAAAAAGCAGCCTAGTAAGTCTAACTTGAGACATAATTGCGC
CGTCAGTGGAGACTTTGTAAAAAATCAAATTCATATCTTAAATTCCTCTT
AATTCATTTCTACATAAATGTCGATGGGGACTTTTCTAAGAACTCAAATT
CATATCCTCCAGGTTTTAGAATGAACATTTTTCTTTATTCTTTAGATTCT
TCTCATATAAGTCAAAATTCTAATCAATCAATACCAACACAATCACCTAG
TCAAAGTCAAATGTTTCAAAGAAATAACCTAAATGCTGCAACGACTCGAC
AGCTCAGTAAGTATAACTCGAGACCTAAATTTTTATCTGAAAAAGTTTGA
ATTTTCATATGGATCTAGCATATCGGATATTATAGCATAGTCGGAGAAAT
GAATAAGTCGCAGAAAGTAAGAGTTTGAACCGAGAACCTAGTTCAGAGCC
TTGTATTTGAGTGGCCTTAAGTGGATACCGCCTCATGTATCATTAGTGTT
GAAATGGTAAATAAATAGTTACTGGAAAAAAATGAAAGAAATGAGGAATA
CAACAGATAGAGAAAGAAAAAGTCTGAAAAGTTGGCAGAGAACCTAGTTC
AGGGCCTGATATCTGAGTGGCCACAAGTTAAAAAAAATTAAAAATAAATG
AGTCAGACTCTTTCTATTTAAGGGAGCCCTTCGATTGGCTAATAGTGCCC
TGCTGATAGAGAAAGAAAAAGTCTGAAAAGTTGGAAGAGAACCTAGTTCA
GAGCCTAGTATCTGAGTCCCGGGGGGGGGGGCACTCAAGGTAAATGACCT
ACCAGACGTTCGGCCCTTAAGGGTAGGTTTTTCATAGTTTAGCTAGTGCA
CTGTAAGGGTAGGAAATTACAAAACTGCGCTGAACTGCACTGTAAGGGTG
AGAAATTGTGATAAAAGGCCAATTTTTTGGTAAAATTGGCACAAAATTGG
TAAATTTTGGAGGAAAAATTCCACATTTTCTTGGAAAATTGCAAAAATTT
TCGCCCTTACGGGCGAGAAATTTTGAAAAAATGCACTGTAAGGGTACGAT
TTTTCATGCAAATTCACTGCACTGTAAGGGTCCGATTTTAGAAGCCAAAT
TTTGGGCCGAACGTATGGTCGTTTTCAGATCGAGTGCCCCCCCCCCCGGG
ATCTGAGTGGCCATAAGCTACAAAATAAAAGATTAGTTAAAGGAATAGTG
TATTGCTACGCAAATCAAAATATTATGGTCACATGTCTGGAATTTGATTG
GTCGAGCGCGATAAAAGTTTACAATTTGATTGGTCGAACGGGATTTTCAC
TTTCGTTTTCGTAATCTAAACAAACCGAAAAATACTTTGCGACATAAAAA
AGTTGGGAGGGGAAAGAAAAATCTTTCGTGTAATTTCTTCTGTCTTGTAT
CATACTTATATGAAGGAAATTTTCTGTTTTGCTATGCCAAAATTGATTCA
CAAATGTAAATACTACACAAGAGTTTTTCTATACACAAAGAGATTGTGAG
ATGAGAAGATATAAACAGTTCTTTTTTGTTTTCCTGTGTTCTTTGTGTTT
TATCAAGAGCAGATGAAGAAAATAACAAATAGTAAATAAAGCATAAAATA
TTTTTTGAAAAAAATAACATCACATTACAAAATTCCTGTATATACATTTG
GATTTTAAAAACTATATAAAGTATTTACAAATTCTTTATGGCTTCACTTT
TATCAAGAGTGATGCAAAAGTATTTGAATAATAATATGACCTCCTCTTAG
AAATTGCCTTCCAAAATATTTCTTTCCATTCAAAAATTCTCAATTAAAGC
ACCCTCAGAATTTTTCACACAGTAGCACTTCATAGGGAAAACTGTTGGTG
AAAAAATACTTCCTTTTTTTAGCAGAAGATGTTTTTAATATCTTAAAATT
TTATAATTGAGTATATCAGTCAGGGAAATCCCTCAATTGCGGTATACTGC
AATTGCGGTAGTTTTCAATCGTGATTAGCCTACAAAGGCTTATAACAGCT
ACATATAGTGCTGGTCGACAAAGATAAACAAACATCGACTGTAAAAAATC
GTACAAGAAGATAGCTTTTCTTTATCAAAAGAATCTGATCTACGGAAAAA
ATATTTTGTCTGTGCGTTAAAAAGATATGATCAATTATGTACAAAAAATT
GCCTGTTTTCTCCTTGAATCTTGAATTCTGGTTCTTGAGTATACTGCAAT
TGCGGTACATGAAAAATTTAAAAGTGACGTATATACTGCAATTGCAGTAA
GAAATTACTACCGCAATTGAGGGATTTCCCTGACTGTATATGTATTTATC
GTCACTTCATACAACATCAGTCACAATATTCCACATTCACTCAAGTTAAC
AACGTAAATAAAATGGAAACAGTTCTTCTTACAGCAGCATATCCATACCA
CTGTAAAAGATGCAGCTATGTCCATCCATCACGAAACAAACTGGTACATG
AAAAATACATTCAACTGTTCCCAAATGCCAAATCATAGCATGTACGAGGA
CTTTCAAAAAGGGTGCAGAGATATGTAGCTTCAGAGTTGAACCATGCCAG
AAGCACAAGAAGACAAAGTCCCTTGATCGATGGTTTGATCTTAATTTTCA
ATGATAGTCACAGGATTTTAAATTTAATCAAATCAATGTGTCCTACTGCT
ACTTCCTCAACATTATTTCATAAAATTCCAAATCAGTGAAATATGATGCT
CAGAACCAGAGTCTTTCGTTCATCGTAGAGTTACTTTTCACTTCATTTTA
TTTGGTTCGTGCAAAATCTCATGATACAGTGCCTTTATCGAGAAAATAAT
ATAAATATCCACGTTCCATGATTATATCCTGAAGTTATGTAGACTACAGT
CTCCAGAGTTGATTTTTCAAGTCATTGGATGAACAAAAATGTCCCATATT
TTGAAGTACAAATCATGAAAATCTTCTTTGAACAAGGCTTTCTTGTCTTG
ATGAGTTTCATTCACTTCTCAGATCCATATATGAACACTTTCGAGGGGTG
AACAAGTCTTTCTTGTCTTGTTGATGAGTTTCATTTCACTTCTCAGATCC
ATATGCACACTTTCGAGAGAAAATAGAAATCTCTTTCTCCTCTTGAGTGT
TCAAAATTGACTACATTGTTATTTAACTGAAAGAAGCAAGAGAAGAGATA
GTTCTGTATAAATTGGTTAGCAAAAGAATTCAACCTTGATGTTAAATATC
TTCTTGTATCTTCAGCATCATAGAAAAATAAACATTGAAACTTTGCACAA
AGATAGTTGAATCTGCTTTACTTATTTGCTTGACACTTAAAAGTTTCACA
TTAAAAATCATATCCAGCTGAATCTCGAGCATCACTGAAAAATATGCTTT
GAAACTTTCCATAATGATAGTTCAATAATAATATGACCTATTTCAGTTAA
TATTAACACTGCTCAGCCACAAAATGATCAATGAAGATCTCGTAAAGATT
GCAGTTTTTCTTAATAAAAATTTTCCAGTCGCCATTTTCTTCTAGCTCGT
TTTTTGAGCAAGACTAAAATCTCGTTCGGTTTTCTCGCGCCCTTGACGGG
AAATACTCACTCGGGTAGTTTTACTTTTTGCGGGAAAAACATGAGCGAGT
TTCTTTGCTGCCGAGTTCAACTGTAGCAATACACTATTCCTTTAAGCAGG
CTCAACAAAACTGAGGCAATAACTAGGAACATACTGGACAATCCAAATGC
GCGATAAAAAAACTCAAAAAACAATTGAAAAACTGTTTGGTGGGGAAATC
TTCGAGGCATGTTTTAAACCTCAATTTTAATCAGAATTTCTAGGCAACGG
TCAAATCTCCTGCGCTCCGGGCATAAAACTTCAATAGAATGTTTAAACTA
CACGCTGATTGGATTATTAATTTATTATGCGTATAGAAGATTTTTGGATA
TGTTTACATTTCCCAAAGGGGGTAGGTACTGGCTGCCCCTATCAGTGCGC
ATATCCCGAAGAGAAGCTCAAGCAGAAAAGATATGTACTAGTTATCGCAT
GATTTCGAGTGCAATACGAGCCTTTAGGCGAGGAAAAATATCGGTAAAAT
CTCGGAACGAGTAAAATATCGAGTATTGCACGAGAAGTCATGTGATAACT
AATTTATTGTCGACTCAAAAAAATTGTCCTCTTTTTGTTTCAAAACTTAC
TTCCGCCTTCTTCTGCTTCTGTGTAGTTTCGAATGTTTTTATTCGAAAAT
CTAATTCGAACGTTAGATTCGAACAAAAACATTCGATAACTTCCCGCTGA
AAATATTCACACAAAAACAAAACTTTTCGATCATTTTCGATCCAGAAGTT
TTGTTTTGAAAAGTTGCAGATTTTTCAGAGATGTATTTGAAAGTTTCTAG
ATTGATAATTCAAAATGCAGATGATGTACAGTATTGTTTTGATGAAGAAG
AAACCCTCCATCATTGGATTAATCAGATTGATAACATTCAGTCTTTTTCT
ATTTTTTTGTTTCGATGACATATGGCCATGGAAAAGAATAGCAGAGGAAG
GAGTCCCACGATGGAAATGTATGCTTGTAAAAATGGTTAAAGAACAACAT
TTTTTCAACAGCAAAACAATTTGGACACTTTCTTGATTATCGTCAAGCTC
TAAATGTTTCGAATTTCAGAAGGAAGATGTAATGATTGTTGAGTTGAAAA
GTCAAGGACGTACGTTGTTGTCTAGCCTGGATATCCAAGCTCAAAATTTA
AGAAAAAACAAAATTTACCTCAACATACAAAGTTCTTAAATTATAGAGCT
TGGTCTCCCTAGAGAATGAAAGTGAAAACCCATGTTTCCTAGCCAACCCA
GGGCAGCAAAACAGAAATTAATAAAAAGCAGTCTTACAAGATCTAAAACT
ATTAAAAACATCCAAAGATTACACCAAAGTCCATAAAAAAGTTTGCATGC
ATTATCATGACCAACCATGTTTTCTTGGAAAATGGACTTGCCTCTGTTTT
CTTCTTTTTCATGTTTTCGTGTAACAGAAAGCCCTATCTTCACTAGCAGC
TGGAGGACTATCCTATTTTTGCTTTAGAATTGCTCAACACCGTGTAGATT
GGCCCTTACGGTTTCAGCAAAGTGAGCGCAAGCAAGCGGACTGCATTCTC
TTAAAGAGAATGCAAATCGCTCTAGGGAGACCAGGCTGTAAATCAGAACA
TAAAATATCTAAAACTAGACTGTGAAATAATTTACAGCCTGGATATCCAG
GCTAGTTGTTGTCGAGAAAGAGAATTAGGAGAGAACTTTTATAAAAATCA
CTCGTCATTTGGTTTAATACAAGACATTATTGCCGACCCAAAAAAATATC
AGCGTTTTGATTGGTCGAGAGCATCGAGATATTTGCGATATTTCATATTT
CTTTAGTCTGGAAATATGACCGGGTTGACTTTTGGGGGACTGGGTAAGCG
GCGGGAGAAAAATCAAAACAAAACAGCCGAAAAGAACTGACCTTCGGAGA
AACTGACTTGGGAATCAAAGGGAAAAACGCAACAAAAATATGTTCAGATT
AACTTTTACTTTGGAGTTCTTCCATAAAAGACACTAAAATCAAATCTGAT
GAACTAAGAAATTATAAAACTACTTGACACCACCCAAATATTTTCAACTT
TTGGCAAATTTGTCCGTGTGGTAACCAAACAGTTTTTTAACAATGCATAC
AAAATAACTTGAGATTCTTGAATGTTTGCCAATAAAAATTCTCATAACAT
AACAAGGGAAGTGTAAGAGAAGATATGACATAGCCTGCATATTGTACCTC
CAATTTATTTAGCACAATGTACGCTTTTAGGCCAACCTGACAGTGTTTCA
TGCAAGACTTGCATATATAATAAAGTTCACAACGTTTTCATACTTTTTCT
CCAAATAGGAAAGGTAGTATCTAAAAAAACTAGATTTTGATTTGATTATA
AATGATGTTTTTTGCACTTTGTGATCAGCTCCCTGCTGCTTTGATCTCTC
AAAGTAATATTTTAATTATTTTACTGATACCACCATACCAACACTAGAAC
AGACTTAAACAACAATTTTCAGGTACACCTAGCAAATCACAGAAAAAGTC
TTTGCCTGTGCCTGCCATGTCACCAGTT Coding sequence (CDS) from alignment at sc0000353_pilon:320325..327352- >XLOC_022118 ID=XLOC_022118|Name=XLOC_022118|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=720bp|location=Sequence derived from alignment at sc0000353_pilon:320325..327352- (Clytia hemisphaerica_ch_hm2_pilon)
GACACAAGAAGGGCAAAAAAGAGAAGAAACTCGTCATTGGTTAGTACTAG
AAGAAACTCATCAACAACGACAACTAAAGGACACAAGAAGGGCAAAAAAG
AGAAGAAACTCGTCATTGGTTAGTACTAGAAGAAACTCATCAACAACGAC
AACTAAAGGTATTGACCTTGGACCCATACGGTTTGAAGATTCAGAAGGTA
TTGACCTTGGACCCATACGGTTTGAAGATTCAGAAGATTCTTCACATAGT
CAAAATTCTAATCAATCCGGAAGAAGTAACCAAAATGAGACTCAACATAA
AAAGCAGCCTAATTCTTCACATAGTCAAAATTCTAATCAATCCGGAAGAA
GTAACCAAAATGAGACTCAACATAAAAAGCAGCCTAATTCTTCTCATATA
AGTCAAAATTCTAATCAATCAATACCAACACAATCACCTAGTCAAAGTCA
AATGTTTCAAAGAAATAACCTAAATGCTGCAACGACTCGACAGCTCAATT
CTTCTCATATAAGTCAAAATTCTAATCAATCAATACCAACACAATCACCT
AGTCAAAGTCAAATGTTTCAAAGAAATAACCTAAATGCTGCAACGACTCG
ACAGCTCAGTACACCTAGCAAATCACAGAAAAAGTCTTTGCCTGTGCCTG
CCATGTCACCAGTTGTACACCTAGCAAATCACAGAAAAAGTCTTTGCCTG
TGCCTGCCATGTCACCAGTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000353_pilon | genome | sc0000353_pilon:320325..327352 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 337-390:55 |
| Aaloc | 226-333:5882 |
| Aaloc | 151-222:6446 |
| Aaloc | 112-147:6781 |
| Aaloc | 31-108:7029 |
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