|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000353_pilon:317493..320108- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022117 ID=XLOC_022117|Name=XLOC_022117|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2616bp|location=Sequence derived from alignment at sc0000353_pilon:317493..320108- (Clytia hemisphaerica_ch_hm2_pilon)
GCTCAGCGACCAAACAATATAATGGTTAGAGTTAATCAGTTGGAACAGCG
CTTGAGAGCTTTTGAAGAGCAGAACAAAAAGGGAAGACAGGATGGTTACT
TTCAGACCTACAACCAGGGTAATAATGAGTTTCCTATACTGCTTCTAGCC
ATTATCATGTGTGTAATTGTGAGTTGTGCACAAAATTACTAGAATCTGAT
TGGTTTAGAGTAGTCCAATTGTTGTGTAATTAACAATTTATCACTCGTAA
CAAGGGAAGAGCTACCATAATCTGCACAAGTTCTTTCTTCTTTGTTAATC
TTGATTAATCATTAAATTCGCCATTTCGCTAATTGATTGTTTGATACTTG
ATTATATTAGTTTTATAACTAGTCTATTGAGGAATCAAAACCATTTACAT
ACCATTCAATAAAATATATATATTGTTTATTTTAAATATATTTTCCTTTT
ATTTAGGAATATGTTAGAGTATGTACCAGAACCTTGATAAATGATCCTTC
AAATGATCTGGATTGGGATTTCAACTTTAGGTATTTTATTTCTTTTAAAT
GTTTCTCTCAGTCTTTTATTAAAACATCCACTCATCTCCAAATCAAATCA
ACTTCCAACTATTATTGAATGAAAATTAACATATATTTTATAGAGTTAAC
ACTGGGCCAAGTCATGCAACAACAGAAAAGATAAAATTAAATGTGATGGC
ACTTGATCGAACAATGACAGAAATCGAATTTAGAGGTATAATTTTGTTTT
CTTTTTGCACAAACAACTAATGCAAAAGTCACTTCATTCCAGCCAACTTT
GTTTATTTTCGGCCAAAAAATCACCCACTTTCCCCATTACCAGCCTCCCT
ATTTCTTTTCTTTTTTCTTTAAAGGGACCCCTCGCTTAAAAATGATAACA
AGACACTCACTTCATAATCATATGAAAAGCAACTTCCCAAAGTATTAGCA
CGCAAAACTCTTTCTTCGCTCCATAATTACAAATTATAAATTTTGATGTT
CACTCAACTTTCAGAAATTTCAAATGGCTTCTGAAGGCCTTCGAATTTTC
TCGCGCTCTTGTCGCACCAAGTCGTCGACACAAATGCACCGGAAAATTAG
AGTACGAGTGTAGAGGCCAGCTCTGGTTCGAACAGTCTAGAATCCGTGCT
CTTCTCCTAAGAAAAACCCTTTGCTTGGAGTCGAGTTGCGGATTAATGGA
GAATCGGTATCGGCTTCAGAACTCCCAATGAGCCCTGGTTGTGTTGGTTT
CAGTCAGACGGAGACGCCATACTGTTTTCACAGGAATCTTTCGATATCTC
TACAGAAACTAGCAGTAAGTTTTGTTCTTTGAATATGTTGTTAGGGGTTT
TTGGACCGATATAATTTGTTTTCATAAAGATCACAAACAAGCGAGGGGTC
CCTTTAAAGAGTTGGTTTTTCAAAACAATAGGGTAAAACAGGTATAAGAA
GCACACTGCAATATTTTTTGTAAATACAAATATACAAATTAAGGGTGAAA
ACATCTCCTTCCTCCTAACTTGTTTTCTGACCCCCTACCTAAAACAAAAT
ATTGAAATATTCCCAACATATATTAATTACGACCCCGTCATTTTATTGAT
TTTCTTTTGGAGCACTTAGTTTATTCTACCCCCCCCTACTGTAATTAAGC
ACAAAATTGTTAGTCAAATATTGTAAAACTTAAAGTTTTTCAAAGCTTTT
GCCTTCACGAAGTTAGTCCCTTCCATCCTACTGCCAACCACCCCCGCGAA
CTGTACTTTACGGAATAAACTAAACTGCAGACCTTCCCCATTAGCCGTCA
AAGAGTATTGTAATACTTTGAATACCAACTGGGAATGTTATCACTTTTTT
TCGATTATAAGATCATTTATATATTTTTTATATAAATGTACAATGAATAT
AATGCAATTACAATAGAAATGACTATACTTTTATTTTTTGTTCTAATTTT
AGTGGCTGTCAAAACCTATTTCAACTCATCTAAATCATATAAATCCAGGA
GATCTGAACAGTTTCTAACTGATACTGCAAAAAATGAAAAATAAACGGTA
AGGAAATTAATTACCTTGAAGAATTAATTCTGAAATTGCACAATTTTTCA
TAATATACAAAATAAGTTCTATATTTTTTTCACAGCCATAATTGTTTAAA
CTAAAACTTTGAAAAAAAATTGTTTTCTATACAATGACCTGGGCGAATCA
AAATTTCCATTATGACTGAAACAGTTATTTCTTGAGCAATGCACTTGGTG
TTTGCAATAGGATAATGGTATATTTTCTTTCACTAGAAACTGGTCAACCG
AAAGAAAGCTCTCAGAAGGTCGACAACCATTCCAGGTGTAGATAAATTGG
TAATTAAAGAAGCACTGAGTTTGGAATTCATGTCTTCAGAAGAAGAGAGA
GAGGATGATGAAGATCTCCAACATTTCAAAATAAGGCCGCTTCGAGAAAG
GACAAGAAGGTTTGATAAATATTTTGAGGCGTTAGATAAAAGACACTGGC
AAAGACTGTCAAAAAAGTCACAAAGGATGACTGTCCAAAGGAAAATGGGC
CCCTACAGTTGCAGAGGGCCACCTAATGTTACTGATGCAAATAGTTGGGC
AATCAGTACGAACTGA Coding sequence (CDS) from alignment at sc0000353_pilon:317493..320108- >XLOC_022117 ID=XLOC_022117|Name=XLOC_022117|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1418bp|location=Sequence derived from alignment at sc0000353_pilon:317493..320108- (Clytia hemisphaerica_ch_hm2_pilon)
GCTCAGCGACCAAACAATATAATGGTTAGAGTTAATCAGTTGGAACAGCG
CTTGAGAGCTTTTGAAGAGCAGAACAAAAAGGGAAGACAGGATGGTTACT
TTCAGACCTACAACCAGGGCTCAGCGACCAAACAATATAATGGTTAGAGT
TAATCAGTTGGAACAGCGCTTGAGAGCTTTTGAAGAGCAGAACAAAAAGG
GAAGACAGGATGGTTACTTTCAGACCTACAACCAGGGAATATGTTAGAGT
ATGTACCAGAACCTTGATAAATGATCCTTCAAATGATCTGGATTGGGATT
TCAACTTTAGGAATATGTTAGAGTATGTACCAGAACCTTGATAAATGATC
CTTCAAATGATCTGGATTGGGATTTCAACTTTAGAGTTAACACTGGGCCA
AGTCATGCAACAACAGAAAAGATAAAATTAAATGTGATGGCACTTGATCG
AACAATGACAGAAATCGAATTTAGAGAGTTAACACTGGGCCAAGTCATGC
AACAACAGAAAAGATAAAATTAAATGTGATGGCACTTGATCGAACAATGA
CAGAAATCGAATTTAGAGTGGCTGTCAAAACCTATTTCAACTCATCTAAA
TCATATAAATCCAGGAGATCTGAACAGTTTCTAACTGATACTGCAAAAAA
TGAAAAATAAACGTGGCTGTCAAAACCTATTTCAACTCATCTAAATCATA
TAAATCCAGGAGATCTGAACAGTTTCTAACTGATACTGCAAAAAATGAAA
AATAAACGAAACTGGTCAACCGAAAGAAAGCTCTCAGAAGGTCGACAACC
ATTCCAGGTGTAGATAAATTGGTAATTAAAGAAGCACTGAGTTTGGAATT
CATGTCTTCAGAAGAAGAGAGAGAGGATGATGAAGATCTCCAACATTTCA
AAATAAGGCCGCTTCGAGAAAGGACAAGAAGGTTTGATAAATATTTTGAG
GCGTTAGATAAAAGACACTGGCAAAGACTGTCAAAAAAGTCACAAAGGAT
GACTGTCCAAAGGAAAATGGGCCCCTACAGTTGCAGAGGGCCACCTAATG
TTACTGATGCAAATAGTTGGGCAATCAGTACGAACTGAAAACTGGTCAAC
CGAAAGAAAGCTCTCAGAAGGTCGACAACCATTCCAGGTGTAGATAAATT
GGTAATTAAAGAAGCACTGAGTTTGGAATTCATGTCTTCAGAAGAAGAGA
GAGAGGATGATGAAGATCTCCAACATTTCAAAATAAGGCCGCTTCGAGAA
AGGACAAGAAGGTTTGATAAATATTTTGAGGCGTTAGATAAAAGACACTG
GCAAAGACTGTCAAAAAAGTCACAAAGGATGACTGTCCAAAGGAAAATGG
GCCCCTACAGTTGCAGAGGGCCACCTAATGTTACTGATGCAAATAGTTGG
GCAATCAGTACGAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000353_pilon | genome | sc0000353_pilon:317493..320108 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 385-714:331 |
| Aaloc | 373-384:582 |
| Aaloc | 289-369:663 |
| Aaloc | 196-285:1973 |
| Aaloc | 121-192:2161 |
| Aaloc | 79-120:2541 |
| Aaloc | 1-75:2617 |
|
