XLOC_022091.9 (mRNA) -

Overview
NameXLOC_022091.9
Unique NameXLOC_022091.9
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000175_pilon:177309..178383-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022091.9 ID=XLOC_022091.9|Name=XLOC_022091.9|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1075bp|location=Sequence derived from alignment at sc0000175_pilon:177309..178383- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGGTTCAAGCCGTGTCGAAGCTTCAAATATTGTTGAAGGTGTCATAGG TGAGAACATTCTTCTTGTCGTATTATATCAGGGAACGAAAAAAACAGTAC AATAAATAGATGATTTCGGCTATGATGCGTTTTGTTTTGAAAAACTCATA TAGTTCCATGATTTATGGCACCAGGTAGAAATTTAGGGTGTTTAGTAGTA ACTATGAAATAATTTTTTTTCAAAAGAGTTTTGTAGTTGAAACTTCGTTA TGTTTTTTTTTTATTCTATTGATAGAGGAAAGCCTAAGTTAAAATTTGAG GTATAAATTTTTGAAATTGGTTCAGTATTTCATGAAGTTAAAAGCTTTAC TTTTCAAAAAAAACTTCTCTGAAAGCATTAAAGTATGCCTAATTTGATAA CCCTTTTTAAAGTATTTTTTACTTTAAAAGTTTATAACTTCGTAAATTCT GAACCAAATTGGAAAGTTACAGCTCAAAATTTAAGTTGGGCTTTCCTCTA TCTAATATAATAGAATTTCTAATGAAAATAAAAATTAATCAGAAAACCAT TTGGGTGGCTCCACGTTGCCACCAAACACTTAAACTTTTTTTGGGTCACC CGGTACACAAAAATGAAAAATTGTGTTGAAACTTTTTGATTCACTGAGAA AGTTTCACATTGTAAAAGCTTTTACCCTATGTGTTATGTTCCTAAAGTGA ATAAAAAGGAAACAAACGAAATCATCTATACAAATTGAACGTTATCGATT TCAGGAAATGGCTTTTATCTAATTTACTTTTGCAATTTCGATTTTAGAAC TCTCCAAAGGTGCTATTAAAAAGGGGATGATCGTCCCAGTATACGCGGAC CCCTCTCACCAAGACTCGTTTTGGTTATTCTTGTTAACTGACGTATACCC TCGGAAAATTGAAGGTATTTTCTTGGAGAAGATTAAAAACCGTGAATATA AACTTGGCAGGAAACAATCGTTGACGTGGAACTGCATAATTCGGAAAAAA CGAAGTAAGGCAGAATTTTACGTGGTTAAATTATTATACGACAATGACCT CTATCACCTACCCTCAGCTGCAGTA

Coding sequence (CDS) from alignment at sc0000175_pilon:177309..178383-

>XLOC_022091.9 ID=XLOC_022091.9|Name=XLOC_022091.9|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=654bp|location=Sequence derived from alignment at sc0000175_pilon:177309..178383- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGGTTCAAGCCGTGTCGAAGCTTCAAATATTGTTGAAGGTGTCATAGT
TAGGTTCAAGCCGTGTCGAAGCTTCAAATATTGTTGAAGGTGTCATAGAA
CTCTCCAAAGGTGCTATTAAAAAGGGGATGATCGTCCCAGTATACGCGGA
CCCCTCTCACCAAGACTCGTTTTGGTTATTCTTGTTAACTGACGTATACC
CTCGGAAAATTGAAGGTATTTTCTTGGAGAAGATTAAAAACCGTGAATAT
AAACTTGGCAGGAAACAATCGTTGACGTGGAACTGCATAATTCGGAAAAA
ACGAAGTAAGGCAGAATTTTACGTGGTTAAATTATTATACGACAATGACC
TCTATCACCTACCCTCAGCTGCAGTAAACTCTCCAAAGGTGCTATTAAAA
AGGGGATGATCGTCCCAGTATACGCGGACCCCTCTCACCAAGACTCGTTT
TGGTTATTCTTGTTAACTGACGTATACCCTCGGAAAATTGAAGGTATTTT
CTTGGAGAAGATTAAAAACCGTGAATATAAACTTGGCAGGAAACAATCGT
TGACGTGGAACTGCATAATTCGGAAAAAACGAAGTAAGGCAGAATTTTAC
GTGGTTAAATTATTATACGACAATGACCTCTATCACCTACCCTCAGCTGC
AGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_022091.9XLOC_022091.9-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000175_pilongenomesc0000175_pilon:177309..178383 -
Properties
Property NameValue
Aaloc52-327:277
Aaloc1-48:1076