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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:212367..214474+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022030 ID=XLOC_022030|Name=XLOC_022030|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2108bp|location=Sequence derived from alignment at sc0000107_pilon:212367..214474+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGGGTGAACAACATAACATTGAGCCAGGGAGCTCCAATGAAACTGG
GGAATCCAGACTTAGTGATCCACACCGATGCCTCGTCGGAAGAAGGTTGG
GGAGCTTCCCTAGAgggggggAGATCAACAGGGGGAGTGTGGACGAAAGA
GGAGAAGGAGAACCACCACATAAACGAGTTAGAACTCATAGCAGCAGAGT
TAGctctgaaaacttttttgaaggaCAGGAAGCCCAGGTTAGTACATATA
TTCATGGACAACATGACAGCATTACACTACCTAATACACAAAGGGGGGac
caaatcgaaaaaaataacaactATAGCCAAAAGGATTTGGGAATTTCTCA
ACGAGAATGGGACCATGATTACTGCGTCCTGGATCCcatcaaaagaaaac
aaaatagcGGATTGGAGGTCAAGACAAAAAGCAAACTCCAGCGAGTGGGA
GCtatcaaaccaaatattttgGAAACTAACAAATTTATGGGGATTACCGG
AAATAGATTGCTTTGCATCAAGGATAATGAGAAAACTACCTCTTTACATG
TCCCTAAATCCAGACCCAGAGTCGTTAGCAACAAATTCTCTTTACCAGAA
CTGGGGAAAATACCCTTACCTGTTTCCACCCTTTTGCCTAATGGGCAGGG
TTTTAAAGATCATCAAGAAACAATCAACTCCAAAAGCGCTAGTAATAGCT
CCGCTTTGGCCAGGACAACCTTGGTTTCCAGTGTTGCTATCAATGTTGAT
AGCAGAACCTGTCCTGTTACCTCAGAAAAGAAACATACTTCTGAATCACA
TGCAAAAACCACACCCGTTAGTCTTAAACCACACCCTACAACTTGCGGCG
TTTCTAGTATCCGGGAACAGTTACAGAAGCAAGGCTTTTCAGAATCAGCT
TCCTCAATCATGGTCCAGGCAAGACGCGAAAGCACAACTTGTGCTTACAA
AACGCCTTGGAGAAAGTGGGTTCTGTGGTGTGGCGGGAAACAGGTGGATC
CCTTTGAAGCACCTGTAAACGTGGTAGTTGAGTTTCTCACAGAACTTTAC
CATGAAGGATATGAATACAGAACTATTAATGTGTATCGATCAGCCATATC
TGCCTATCATCATCCTGTGAACGGGATCAGGGTAGGACAGACTAAAGAAG
TTTGTCTATTGTTGTCTGGGATAGACAATCTAAGACCCCCGACCCCAAAG
TATAATGTAATCTGGGAGGTTGAGGACGTCTTGAACTGTTTGAGAGACTT
AGGAAAGGACCAAGAGTTGACTAATAAGGATTTGACTTTAAAAACAGTTA
TGCTGATGGCCTTAACTGCCATTAAGAGATGTTCAGACCTTCACATTTTT
GACACAAGATACATGGCAgttggagaaaataaaatagtttttaaacTTAG
TCAGAAACCAAAAGGTTTTAGGAAAAAAGGGAAGAGTCCAAAACCGGTGT
GCTTTATTGCGTCAGGGGTTAGACTATGCCCAGTCTCCACCATCAAAAGT
TACATAGACAGAACTAAAGCGTGGAGAGAAGAGAATGGAGAAACAAgatt
ttttctcagttttgtCAATCCACATAAGGGTGTCACCTCTAGCACTATTG
GGAGATGGTTAAAAACAGTCTTAGGTAACGTTGGGGTAGACATCTCAAAA
TTTACAGCACATTCTACTAGATCTGCAGCCTCCTCTAAACTCAAGGTATT
GGGAGCCTCAGTGTCGGAAATAATGAATTGTGGGAATTGGAGCAGTGCTT
CAACATGGCAAACTTTTTATCATAAACCTATTCTTAGCAATCTTGAACAG
GCTCAGAAGGAGATGTTAAAATGAGCTTTGAACAAGGAAGGGCACTGGCC
GAACGCGGCCTTTTGGCCACTTTTCGGATCCCATGGTCGCACCATAAAAT
CTTGCAAgattttttgatgtaaaattcGAGAATTTTATAAGCGCGACGCG
AAGCGTCGCGCGAaatgaaatttagattttacaTCAGAAAATCTAAGAGA
ATTTATGGTGCCTCGCCCTCCCTCCCTGTTGACATAAATTCTTATCATCT
GATTCTATCATATTTTTCAGGATGGAACGGTCGCGGAAGAGGACGCGgtt
tcaattaa Coding sequence (CDS) from alignment at sc0000107_pilon:212367..214474+ >XLOC_022030 ID=XLOC_022030|Name=XLOC_022030|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3324bp|location=Sequence derived from alignment at sc0000107_pilon:212367..214474+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTGGGTGAACAACATAACATTGAGCCAGGGAGCTCCAATGAAACTGG
GGAATCCAGACTTAGTGATCCACACCGATGCCTCGTCGGAAGAAGGTTGG
GGAGCTTCCCTAGAgggggggAGATCAACAGGGGGAGTGTGGACGAAAGA
GGAGAAGGAGAACCACCACATAAACGAGTTAGAACTCATAGCAGCAGAGT
TAGctctgaaaacttttttgaaggaCAGGAAGCCCAGGTTAGTACATATA
TTCATGGACAACATGACAGCATTACACTACCTAATACACAAAGGGGGGac
caaatcgaaaaaaataacaactATAGCCAAAAGGATTTGGGAATTTCTCA
ACGAGAATGGGACCATGATTACTGCGTCCTGGATCCcatcaaaagaaaac
aaaatagcGGATTGGAGGTCAAGACAAAAAGCAAACTCCAGCGAGTGGGA
GCtatcaaaccaaatattttgGAAACTAACAAATTTATGGGGATTACCGG
AAATAGATTGCTTTGCATCAAGGATAATGAGAAAACTACCTCTTTACATG
TCCCTAAATCCAGACCCAGAGTCGTTAGCAACAAATTCTCTTTACCAGAA
CTGGGGAAAATACCCTTACCTGTTTCCACCCTTTTGCCTAATGGGCAGGG
TTTTAAAGATCATCAAGAAACAATCAACTCCAAAAGCGCTAGTAATAGCT
CCGCTTTGGCCAGGACAACCTTGGTTTCCAGTGTTGCTATCAATGTTGAT
AGCAGAACCTGTCCTGTTACCTCAGAAAAGAAACATACTTCTGAATCACA
TGCAAAAACCACACCCGTTAGTCTTAAACCACACCCTACAACTTGCGGCG
TTTCTAGTATCCGGGAACAGTTACAGAAGCAAGGCTTTTCAGAATCAGCT
TCCTCAATCATGGTCCAGGCAAGACGCGAAAGCACAACTTGTGCTTACAA
AACGCCTTGGAGAAAGTGGGTTCTGTGGTGTGGCGGGAAACAGGTGGATC
CCTTTGAAGCACCTGTAAACGTGGTAGTTGAGTTTCTCACAGAACTTTAC
CATGAAGGATATGAATACAGAACTATTAATGTGTATCGATCAGCCATATC
TGCCTATCATCATCCTGTGAACGGGATCAGGGTAGGACAGACTAAAGAAG
TTTGTCTATTGTTGTCTGGGATAGACAATCTAAGACCCCCGACCCCAAAG
TATAATGTAATCTGGGAGGTTGAGGACGTCTTGAACTGTTTGAGAGACTT
AGGAAAGGACCAAGAGTTGACTAATAAGGATTTGACTTTAAAAACAGTTA
TGCTGATGGCCTTAACTGCCATTAAGAGATGTTCAGACCTTCACATTTTT
GACACAAGATACATGGCAgttggagaaaataaaatagtttttaaacTTAG
TCAGAAACCAAAAGGTTTTAGGAAAAAAGGGAAGAGTCCAAAACCGGTGT
GCTTTATTGCGTCAGGGGTTAGACTATGCCCAGTCTCCACCATCAAAAGT
TACATAGACAGAACTAAAGCGTGGAGAGAAGAGAATGGAGAAACAAgatt
ttttctcagttttgtCAATCCACATAAGGGTGTCACCTCTAGCACTATTG
GGAGATGGTTAAAAACAGTCTTAGATGGTGGGTGAACAACATAACATTGA
GCCAGGGAGCTCCAATGAAACTGGGGAATCCAGACTTAGTGATCCACACC
GATGCCTCGTCGGAAGAAGGTTGGGGAGCTTCCCTAGAgggggggAGATC
AACAGGGGGAGTGTGGACGAAAGAGGAGAAGGAGAACCACCACATAAACG
AGTTAGAACTCATAGCAGCAGAGTTAGctctgaaaacttttttgaaggaC
AGGAAGCCCAGGTTAGTACATATATTCATGGACAACATGACAGCATTACA
CTACCTAATACACAAAGGGGGGaccaaatcgaaaaaaataacaactATAG
CCAAAAGGATTTGGGAATTTCTCAACGAGAATGGGACCATGATTACTGCG
TCCTGGATCCcatcaaaagaaaacaaaatagcGGATTGGAGGTCAAGACA
AAAAGCAAACTCCAGCGAGTGGGAGCtatcaaaccaaatattttgGAAAC
TAACAAATTTATGGGGATTACCGGAAATAGATTGCTTTGCATCAAGGATA
ATGAGAAAACTACCTCTTTACATGTCCCTAAATCCAGACCCAGAGTCGTT
AGCAACAAATTCTCTTTACCAGAACTGGGGAAAATACCCTTACCTGTTTC
CACCCTTTTGCCTAATGGGCAGGGTTTTAAAGATCATCAAGAAACAATCA
ACTCCAAAAGCGCTAGTAATAGCTCCGCTTTGGCCAGGACAACCTTGGTT
TCCAGTGTTGCTATCAATGTTGATAGCAGAACCTGTCCTGTTACCTCAGA
AAAGAAACATACTTCTGAATCACATGCAAAAACCACACCCGTTAGTCTTA
AACCACACCCTACAACTTGCGGCGTTTCTAGTATCCGGGAACAGTTACAG
AAGCAAGGCTTTTCAGAATCAGCTTCCTCAATCATGGTCCAGGCAAGACG
CGAAAGCACAACTTGTGCTTACAAAACGCCTTGGAGAAAGTGGGTTCTGT
GGTGTGGCGGGAAACAGGTGGATCCCTTTGAAGCACCTGTAAACGTGGTA
GTTGAGTTTCTCACAGAACTTTACCATGAAGGATATGAATACAGAACTAT
TAATGTGTATCGATCAGCCATATCTGCCTATCATCATCCTGTGAACGGGA
TCAGGGTAGGACAGACTAAAGAAGTTTGTCTATTGTTGTCTGGGATAGAC
AATCTAAGACCCCCGACCCCAAAGTATAATGTAATCTGGGAGGTTGAGGA
CGTCTTGAACTGTTTGAGAGACTTAGGAAAGGACCAAGAGTTGACTAATA
AGGATTTGACTTTAAAAACAGTTATGCTGATGGCCTTAACTGCCATTAAG
AGATGTTCAGACCTTCACATTTTTGACACAAGATACATGGCAgttggaga
aaataaaatagtttttaaacTTAGTCAGAAACCAAAAGGTTTTAGGAAAA
AAGGGAAGAGTCCAAAACCGGTGTGCTTTATTGCGTCAGGGGTTAGACTA
TGCCCAGTCTCCACCATCAAAAGTTACATAGACAGAACTAAAGCGTGGAG
AGAAGAGAATGGAGAAACAAgattttttctcagttttgtCAATCCACATA
AGGGTGTCACCTCTAGCACTATTGGGAGATGGTTAAAAACAGTCTTAGGA
TGGAACGGTCGCGGAAGAGGACGCGgtttcaattaaGATGGAACGGTCGC
GGAAGAGGACGCGgtttcaattaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:212367..214474 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1627-1662:2073 |
| Aaloc | 1-1623:1 |
|
