XLOC_021962 (mRNA) -

Overview
NameXLOC_021962
Unique NameXLOC_021962
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000472_pilon:72176..73303-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021962 ID=XLOC_021962|Name=XLOC_021962|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1128bp|location=Sequence derived from alignment at sc0000472_pilon:72176..73303- (Clytia hemisphaerica_ch_hm2_pilon)
ATAATTTTTTTTAACAAGACAACAATGAAATTTGAAAAAAAAGAGTTGAC AGTGACATTAAACAACCCAAAAAAAGCTGGAACAGAAGAAATATATAGCA TTGATTTAATAGGAAGAAAATTAGTTTTCGTAAGAATTTACGAAAAGTGC CTTGTTAATAAAATTATTGAACTTTACTATTTTGACTTTGACGAAATCGT CGATTTGAAATTCGAGAAAAAGATGGTTGAAATCGATACTGAGCCTATAA CTATGGATTACAAGAAAGCAGAGTTCGGTGGTTCTATTTGTAAGTTTGGC ATCAACAATGAAAAATTTTTTGTAATGGTTTATAAACGGTTTGAGGATAA TACCAAATCAGAAAACTACAAATGCGCAATTGATGTTGTTGAAAACAAAA AACGTATTTTCATCAACCTTCCGTCTCTTCCATATTTTTATGACAGCTTT TTTATGGATAACCGATGCTTCTTTTTGAGTTATTCAACCAATAAAATTCT AGAGTTTAATTATGATGGTCAGTTGGTTCACGTTTATAAATATAAAAAGG AAATTCATCCCGGCTCCATGTACTGTATTGTGCCGATTAACAAATCAATG TTTTTAAGACCATTTGTTTTTGATAATGGATACATGGATCCCGTCCATGT TTCTCTTTTGGAAAATGGGAAAGTTTATAACATTGATTTTCAAAATAAGG AAGTTGTACAGTTACCAGAGGATGTCGAAGAAGTAGACGTGTGTGGTTTA TCAAAAGCATTTGGTATGATGACCCTCAATTTTAATTTGCAAACTTTTGA GGGAAGAAAGTTTATAATGATCGATTCAAACTCCAAAATTACATTCCAAA TGTTTGAGAAAGACTGCTTGACTGAGAAATATACCAATTGGAGCATGGAG GAGATAGCAACAACCCTTTTTCATAAAAAACTATGTACCAAGCCATACAG AGGGCGAATAGGTGAATCAATTTTCAGTGACCTTGAATTCAATGTAGTGA AAACAAACATTTCTAAAAGGTTTTCGTCATTGAAACGTTTATCAGCAAGG ACTGTTTTAACAAACTTCAGTGATGAGTACATTCTGAAACAAAATTTACC CAAATGTTTGTTTGGCTTTCTAGGGTTT

Coding sequence (CDS) from alignment at sc0000472_pilon:72176..73303-

>XLOC_021962 ID=XLOC_021962|Name=XLOC_021962|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2256bp|location=Sequence derived from alignment at sc0000472_pilon:72176..73303- (Clytia hemisphaerica_ch_hm2_pilon)
ATAATTTTTTTTAACAAGACAACAATGAAATTTGAAAAAAAAGAGTTGAC
AGTGACATTAAACAACCCAAAAAAAGCTGGAACAGAAGAAATATATAGCA
TTGATTTAATAGGAAGAAAATTAGTTTTCGTAAGAATTTACGAAAAGTGC
CTTGTTAATAAAATTATTGAACTTTACTATTTTGACTTTGACGAAATCGT
CGATTTGAAATTCGAGAAAAAGATGGTTGAAATCGATACTGAGCCTATAA
CTATGGATTACAAGAAAGCAGAGTTCGGTGGTTCTATTTGTAAGTTTGGC
ATCAACAATGAAAAATTTTTTGTAATGGTTTATAAACGGTTTGAGGATAA
TACCAAATCAGAAAACTACAAATGCGCAATTGATGTTGTTGAAAACAAAA
AACGTATTTTCATCAACCTTCCGTCTCTTCCATATTTTTATGACAGCTTT
TTTATGGATAACCGATGCTTCTTTTTGAGTTATTCAACCAATAAAATTCT
AGAGTTTAATTATGATGGTCAGTTGGTTCACGTTTATAAATATAAAAAGG
AAATTCATCCCGGCTCCATGTACTGTATTGTGCCGATTAACAAATCAATG
TTTTTAAGACCATTTGTTTTTGATAATGGATACATGGATCCCGTCCATGT
TTCTCTTTTGGAAAATGGGAAAGTTTATAACATTGATTTTCAAAATAAGG
AAGTTGTACAGTTACCAGAGGATGTCGAAGAAGTAGACGTGTGTGGTTTA
TCAAAAGCATTTGGTATGATGACCCTCAATTTTAATTTGCAAACTTTTGA
GGGAAGAAAGTTTATAATGATCGATTCAAACTCCAAAATTACATTCCAAA
TGTTTGAGAAAGACTGCTTGACTGAGAAATATACCAATTGGAGCATGGAG
GAGATAGCAACAACCCTTTTTCATAAAAAACTATGTACCAAGCCATACAG
AGGGCGAATAGGTGAATCAATTTTCAGTGACCTTGAATTCAATGTAGTGA
AAACAAACATTTCTAAAAGGTTTTCGTCATTGAAACGTTTATCAGCAAGG
ACTGTTTTAACAAACTTCAGTGATGAGTACATTCTGAAACAAAATTTACC
CAAATGTTTGTTTGGCTTTCTAGGGTTTATAATTTTTTTTAACAAGACAA
CAATGAAATTTGAAAAAAAAGAGTTGACAGTGACATTAAACAACCCAAAA
AAAGCTGGAACAGAAGAAATATATAGCATTGATTTAATAGGAAGAAAATT
AGTTTTCGTAAGAATTTACGAAAAGTGCCTTGTTAATAAAATTATTGAAC
TTTACTATTTTGACTTTGACGAAATCGTCGATTTGAAATTCGAGAAAAAG
ATGGTTGAAATCGATACTGAGCCTATAACTATGGATTACAAGAAAGCAGA
GTTCGGTGGTTCTATTTGTAAGTTTGGCATCAACAATGAAAAATTTTTTG
TAATGGTTTATAAACGGTTTGAGGATAATACCAAATCAGAAAACTACAAA
TGCGCAATTGATGTTGTTGAAAACAAAAAACGTATTTTCATCAACCTTCC
GTCTCTTCCATATTTTTATGACAGCTTTTTTATGGATAACCGATGCTTCT
TTTTGAGTTATTCAACCAATAAAATTCTAGAGTTTAATTATGATGGTCAG
TTGGTTCACGTTTATAAATATAAAAAGGAAATTCATCCCGGCTCCATGTA
CTGTATTGTGCCGATTAACAAATCAATGTTTTTAAGACCATTTGTTTTTG
ATAATGGATACATGGATCCCGTCCATGTTTCTCTTTTGGAAAATGGGAAA
GTTTATAACATTGATTTTCAAAATAAGGAAGTTGTACAGTTACCAGAGGA
TGTCGAAGAAGTAGACGTGTGTGGTTTATCAAAAGCATTTGGTATGATGA
CCCTCAATTTTAATTTGCAAACTTTTGAGGGAAGAAAGTTTATAATGATC
GATTCAAACTCCAAAATTACATTCCAAATGTTTGAGAAAGACTGCTTGAC
TGAGAAATATACCAATTGGAGCATGGAGGAGATAGCAACAACCCTTTTTC
ATAAAAAACTATGTACCAAGCCATACAGAGGGCGAATAGGTGAATCAATT
TTCAGTGACCTTGAATTCAATGTAGTGAAAACAAACATTTCTAAAAGGTT
TTCGTCATTGAAACGTTTATCAGCAAGGACTGTTTTAACAAACTTCAGTG
ATGAGTACATTCTGAAACAAAATTTACCCAAATGTTTGTTTGGCTTTCTA
GGGTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_021962XLOC_021962-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000472_pilongenomesc0000472_pilon:72176..73303 -
Properties
Property NameValue
Aaloc1-1128:1129