XLOC_021942 (mRNA) -

Overview
NameXLOC_021942
Unique NameXLOC_021942
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000539_pilon:48870..49567-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021942 ID=XLOC_021942|Name=XLOC_021942|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=698bp|location=Sequence derived from alignment at sc0000539_pilon:48870..49567- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGATCTGGAATGTGTTGACGTTTTGTTCACTTCGCCGGAGACAATATT GTCGGATTCCAGTAGGGATCTTTTAAAGAAAAAGGATGTCATCAAAACAA TCTGTGCTGTGTTTGTGGATGAAAGCCATTGTATTGAGAAATGGTAAGTT ATCTAGTATATAAGATTTATTTTTTATGTATTTTAGATGATAATTGGAAA ACCATACAATTAAACCGTCAACTGATATGAAGTTACTTTCATCAGTAAGG GGTACTAACTTTTATCCCCTCCAAATGACAGACAGACTTTTATATGGTTC TCAATATATAAACTTTTAAAGTTCATAACTGAACTGATATCAAAACTAAT TTTGTTTTATTATTAGCTACTGTAAGTTTACTAATTATTGAACAGACCAG AAAATGTTGATGGTTTGTTGGGAAAAATTTTTATTCAGTGTCAAATGTTG AATAGCTACATTACATTGTCATAATCTATTAATCATATCTATTTTATTTT GCAATTTTCAGGGGAACATCAAGTGACAAACGACGAGCAGCTTTCCGTGA ATCTTTTTCTCAACTTGCAGAAGTCCGCTCTCTTCTTGCCAAACCCATCC CTTTTGTCGCCATGACGGCAACTGCAATGAGAAGAACAAGGGATTTTATA ATTGCCAATTTACAAATGTATCAGCCAAAACTATATATTCGCAGTCCT

Coding sequence (CDS) from alignment at sc0000539_pilon:48870..49567-

>XLOC_021942 ID=XLOC_021942|Name=XLOC_021942|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=660bp|location=Sequence derived from alignment at sc0000539_pilon:48870..49567- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGATCTGGAATGTGTTGACGTTTTGTTCACTTCGCCGGAGACAATATT
GTCGGATTCCAGTAGGGATCTTTTAAAGAAAAAGGATGTCATCAAAACAA
TCTGTGCTGTGTTTGTGGATGAAAGCCATTGTATTGAGAAATGAAAGATC
TGGAATGTGTTGACGTTTTGTTCACTTCGCCGGAGACAATATTGTCGGAT
TCCAGTAGGGATCTTTTAAAGAAAAAGGATGTCATCAAAACAATCTGTGC
TGTGTTTGTGGATGAAAGCCATTGTATTGAGAAATGGGGAACATCAAGTG
ACAAACGACGAGCAGCTTTCCGTGAATCTTTTTCTCAACTTGCAGAAGTC
CGCTCTCTTCTTGCCAAACCCATCCCTTTTGTCGCCATGACGGCAACTGC
AATGAGAAGAACAAGGGATTTTATAATTGCCAATTTACAAATGTATCAGC
CAAAACTATATATTCGCAGTCCTGGGAACATCAAGTGACAAACGACGAGC
AGCTTTCCGTGAATCTTTTTCTCAACTTGCAGAAGTCCGCTCTCTTCTTG
CCAAACCCATCCCTTTTGTCGCCATGACGGCAACTGCAATGAGAAGAACA
AGGGATTTTATAATTGCCAATTTACAAATGTATCAGCCAAAACTATATAT
TCGCAGTCCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_021942XLOC_021942-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000539_pilongenomesc0000539_pilon:48870..49567 -
Properties
Property NameValue
Aaloc145-330:187
Aaloc1-141:699