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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000460_pilon:137369..140819+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021913 ID=XLOC_021913|Name=XLOC_021913|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3451bp|location=Sequence derived from alignment at sc0000460_pilon:137369..140819+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTGCcctttttttctgctttttaatGCTTCGGATGCTGCTGaacaagaa
aacagaaaaacgtAAATACACAAATATCTATGAAGATGTCTAAGAAAAAT
CATGATGAGCCTTCTTCAGTTTCTGATGAAGgaatttctaagaaaattat
TGATGAGCTTTATCCAGAAGATAAAGAACAGATAGATCAAGAAAGGTACT
CGTACAAAAATAATAGAGGTATAAATAGAGACAtacattttatgaatttg
tGTAGACACGAAAATTCAGTGTATACATGTGCTGTAGACTCATTTTTGGA
AATACCATATTCTACGTTTGGCCCATACATTGCTGAAATTGAGACACAGA
GCTTATTCTTTGATTTGTTAATAAATTGTTTGAAGTCATACAGTATCATT
TTGAATTCTGACATTACAGACAATagggaaaatgaagaaaacttatCTAT
TATTCGTCAGCCTGTTTGGGACTTCTTAATCACAAATTGCACATCTTTTG
AAAATCGTGATTGCAATGCtgagttttctcaaattttttcaggAAGTATT
GTTCGCAATTTTTCAGAGCAAGAGAAAGCTTTATTTGAGACACGTTACAG
AATAGAGGGATCATGCTCTAACTGCGGTGAAGAATTAATGAGTCAATGTA
GTACATTTTTGAATTACATTTCAGAATTAAACTTAAATCTTTTAGACGAC
TTCCATAATTGGCAGAATCTTTTAGACCCAGTTATGATTGATAAATCAAT
GATGTGCAGTAGTTGTGGGAATGTTTCTCATGATACATCGCTCGTTTCAT
TTGTTGCACCTACAATTTACTTTGTAGAACTTGGAGGTGATTATGATATA
GAATTTGGACAGAATTTGGcacagtgatctttcattggaacttttgtaaa
atcgggattattttggctaatatcccttgtatctccttaagtagtgctca
taaggagatgaaatttggtatataaagtctccttatagcaatgtaaaagt
aggaaaaaaagttttttgatacatcaaattgttcaccagttattgggtac
tttcgttttcgagagatccctctatcccgtcctcatcccggttgagatcc
ctctaaatcggaatcaagataattccggataggaaagtgctagaagcttg
aaattttcacagaatgtacttatatttgtcctctaaaggataaaagaaaa
ataaagcattTCTTATCAGTTAATTTCTTGAAATTAggctaaaacaagga
aatttgaatccgattaatccaatcaaagatcGCCGTGTGGTTTTAAATGA
TCAGAACTATATCCTGCGAGGTCTTGTTAGACATAGAGGAGACCACTTTT
CACGTGCCGTATTAGATGATAAAGACTGGATCTATATTGATGATTtacat
gaaaaaacattttgttgcaAAAGTTTGCGTCAACTTTATGAGATTCATAA
TGGTGGATTGtttttttGCATTTACATAAAGGAAAATATTTCTGATCAAA
CTAATCTTGTACATTttgcagatgagatggagtttttataagatacctta
ataattggtcatttggaGTAATAAAAAtaacgcgttctttagaaaaagta
acgaaattgttttattactggttaacgaccaaccaaatcaaataagagct
tgtaaaatcTCCATCTCATCCAACATTTTGAGATAGCTAGCACTTTGAGG
AAAAGAAAGATTGACAAAGATGATTTAAaggacaaaaatttaaaaaaaat
gaggaaaataaaGCTGAGATCGATAAAAGATATTATGCCAGAAATAAGGA
ACAAattaatttcaagatttttttatgtacccttattgaaactTTCAAGT
AGAAATCCAGCGGCGCATTAGGGCCGATACCCCCGAgggccgaaaataag
gtccgcTTTTAAGGTTAACACATGCGCGCGCACATTTCACTGGAATTGTT
TGGCAAATCAAAGGTGGCAGcaaaagattttgttgattgccgacttgata
TATCAGGATTTACTAAATGTTAAAAACCCGACGAAATGACAGTTGCTTGA
TTCAATTTAAGGCTTTAAGTACCAAATTAAAACAGAACACCTCAGCCTCA
TAAATAGTAAGTGTAACAGATACATGGATATATGGCTGATATAACACTGA
ATTGTTCTTTGATGGTCAATCTGATATCTTGAATGTTtctgaaattgaat
ttttttttcaaaagttgattACCAAAAATCAGACCAGAAGGGGTAACAGA
TTATAATTGGAACCGCTCAAatgctaccctgagtatcagaggttaagttt
tcaaagaaaatagtaacctctgaagacaaataatagaaattttatcgcgc
atgtgtcaatctaatcactgtagaaaaaatcgaagatgaagagcaaatat
taccatattaatgtctagcagactttatcagtatgcagtttactatttac
gaattccccagaaacctccaagtgtagttgaaataagtttatttcgaaag
aaatcttttacatgatccccaaatgtataacagtaatgactaaactttta
attatggaaatgtcactttaattgaatcgaaataatagacagactttatg
atatgattctctatcactgactctttttacaaagcattgatgactttttg
taagttgtgttttcaacgacgggaataaaaatatcgactatgacgctcat
ccaagatcttggatggtcgtcatggttacttttgtcttcgctgattgaat
agaatctcgattcgtcggcacagcgtaaatatatgattttgagctgtgct
tttcacggtactcaAATGCATCCACCAAAATATAAATGCagctaatgtac
acgtttttttttataaggaacacgtttataaggaactcgaggctgaaaat
ggttcaaaaaataaggaattgttaaggaactgctcaggctgaggataagt
ggatttgaaaataatgtaccttattgggactaatttgaccaaattttgat
ctttcaaggggcaaaaagttcaaaatttcctatgtagtaaggaactcgat
aaggaactttgagactggaattctctgtaaaaataaggaactccaggctc
agagcaaagttaaggttccttataaaaaaaacgtgtatgtgttGAACTGT
AGTACATGATTGAttatatattttcttctttaCAGCATTATCTGGATGTG
TTATCAATGTTAACGATGAACTGGTCTCTGGCAGCAAGAATTGTTATTTT
GATGTTGACATTAAATACTCCCCTACGTGTAAATCTAAGGTCAGGGTAAT
GAGCAATGATAATCATTCACATAAACGCTTCAAACAGCTTCAAAGAGATT
TTGTGCCAATCAAAATGTCACGATTGTCGCCAATGAACCAAGTGGCAAAA
ATTCTAGTCTTAAATCCCTTGCACAAGCATTTTTGGAGTTGGAGGATATA
G Coding sequence (CDS) from alignment at sc0000460_pilon:137369..140819+ >XLOC_021913 ID=XLOC_021913|Name=XLOC_021913|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=654bp|location=Sequence derived from alignment at sc0000460_pilon:137369..140819+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTGCcctttttttctgctttttaatGCTTCGGATGCTGCTGaacaagaa
aacagaaaaacCTTGCcctttttttctgctttttaatGCTTCGGATGCTG
CTGaacaagaaaacagaaaaacCATTATCTGGATGTGTTATCAATGTTAA
CGATGAACTGGTCTCTGGCAGCAAGAATTGTTATTTTGATGTTGACATTA
AATACTCCCCTACGTGTAAATCTAAGGTCAGGGTAATGAGCAATGATAAT
CATTCACATAAACGCTTCAAACAGCTTCAAAGAGATTTTGTGCCAATCAA
AATGTCACGATTGTCGCCAATGAACCAAGTGGCAAAAATTCTAGTCTTAA
ATCCCTTGCACAAGCATTTTTGGAGTTGGAGGATATAGCATTATCTGGAT
GTGTTATCAATGTTAACGATGAACTGGTCTCTGGCAGCAAGAATTGTTAT
TTTGATGTTGACATTAAATACTCCCCTACGTGTAAATCTAAGGTCAGGGT
AATGAGCAATGATAATCATTCACATAAACGCTTCAAACAGCTTCAAAGAG
ATTTTGTGCCAATCAAAATGTCACGATTGTCGCCAATGAACCAAGTGGCA
AAAATTCTAGTCTTAAATCCCTTGCACAAGCATTTTTGGAGTTGGAGGAT
ATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000460_pilon | genome | sc0000460_pilon:137369..140819 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 64-327:3188 |
| Aaloc | 1-60:1 |
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