XLOC_021895 (mRNA) -

Overview
NameXLOC_021895
Unique NameXLOC_021895
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000063_pilon:536929..538869-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021895 ID=XLOC_021895|Name=XLOC_021895|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1941bp|location=Sequence derived from alignment at sc0000063_pilon:536929..538869- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGAAGATGGCAATCCTAGCCCAATGAGGACCCCAAGGAAATCATGGTC GACCGAAGAAGATGCCATAATACAATCTGCTTTGTCTAATGGGACTCCAT TCAAAGACATTAACGTTGACGCAAGTCCTCGACAGATTCGTGACCACGTG AGGCATATTAAACGTAAAGGCCGAAACAGCTCGGACAAAGAGAGAGTAAC AATACCTGTATCTGCAACGCTTGTGAGTTCAATTTCATTGTTTCTTTAAG AATAAATATGATCAGGAAGGGTAGCATTTGTTGTGTATTTTCTACTGTGG AATCGCGCAGTTCCAACTTTTATTCTTCGAACTAATTAGCCTATTTAATT CACTATACGGGGGTGGGTTTGACGACCTTTTCTTAGCTCAAAATCGTTTT CGCCATCTTTCTAGAACATGCACTTAAACTGTGAATATATTATTTAAACC CCTGGAAAAAATTCTATACCCACTTTATTGAAGACCGTGCTTTGAGCTCC GTCCCTTGTCGAAAAAAGGCAAAAGTGAAATAGAGCTAAAACGATCAAAA ATCACTAAAAAGGGCCAGAATTGGCCTACTTCAAAGGTTAATATCGTTAC TAGGGACATAGCTAGAAGCCTGTTCTTTATCCAGAGTCTATGATAAATCC TTGATACAAACAGCTGCTATTGCCACAAACAGCATATTTTTTTAAGTTTC TTCATTTTCATGTACTTCTTGTAGAATGAAGAAGATGAACATGATCACAG CACGATACGGATGGCCCCTAGGTCTCCTCCAAGGATGGAAATATTTCACG TAAGTGCTTAGAAAAGATGATTTCCCGTCCCCATGAAACTTTTTTTAATT CGTTATGTGCGTTAAAATTTTTCTTTTTCCGTGCTACAACAACATCTTCA ACATTTTTCAAATAGTGTGCTTCTACAGTGTGTCCGGACAAAATTTATCT AAAGAAAAATCTTTTACGTTCAATTTCTTTTAATGGCGTCTATTAGGCTA TTTTTCTCACTCAAGTGAGTTACGGCATGTCCAAAGAAAAAGTGAACCAG TTCCACTCATTTTCAAAATGTCGAACATAGCTGGAAAGAAGCGCCTTGTG ATGTAGATCAACGTGATAGGTGTTAGAAAAATTTAACTTAAGGCTATAAG AAGTTATAGCCCAAAAACCTGTATTATGACGTCATAAACATTACATAACA TTACGTCATAAAACTAAAAATTTGAATATCTCGTGAACTAAAAGTCATAT AAACGTCAAATTTTGACCACAAATAGATATTGATGTTAGAAAATTTCTGA GTTAAAAATCCTTTGAAAATAATGATGACGTCATTTATTATAGCCAAAAA TCGAAAATTGCTTAAAAATGCTGACGTCATCATTTTTCAGGAGATTTCGA AAATTTTACTTCTAGAGAATTACGATATATTTGTTCTGTCAAAGTTACAT ATTGATATCATTAATAGTTTATGAGTTATTTAAATTTTAAATTTCGTGAC GAAATGTTACGTAATGTTTATGACGTCATAATATAGGTTTTTGGGCTATA ACTTCTTATAGCCTTAAGTTAAATTTTTCTAACACCCATCACGTTGATCT ACATCATATGGCGCTTCTTTTCAGCTAGGTTTGACATTTTGAAAGTGAGT GGAACTGGTTCACTTTTACCTTGGACATGCCGTAACTCACTTGAGCACAA AGAATTAATAAAGCTACATAGATATCTTTTGAATAATCAACGAATTTCCG TGTTGCAGCAATGCAGTAAAATTCCTGAGGGCGACTTTTTTGAGGTCTTT ATTTTTTTTGCCTCCTTCGTTTAGACTGAGGGAGATAGACACTCTTTATG GCCGCCAGTTGATGTGCTAACACTTGAAAAATATGGTCAAGATTTCATTG ACAAGAAACAGAAAATGAACGATAAATCCATTAAACAACTG

Coding sequence (CDS) from alignment at sc0000063_pilon:536929..538869-

>XLOC_021895 ID=XLOC_021895|Name=XLOC_021895|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=828bp|location=Sequence derived from alignment at sc0000063_pilon:536929..538869- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGAAGATGGCAATCCTAGCCCAATGAGGACCCCAAGGAAATCATGGTC
GACCGAAGAAGATGCCATAATACAATCTGCTTTGTCTAATGGGACTCCAT
TCAAAGACATTAACGTTGACGCAAGTCCTCGACAGATTCGTGACCACGTG
AGGCATATTAAACGTAAAGGCCGAAACAGCTCGGACAAAGAGAGAGTAAC
AATACCTGTATCTGCAACGCTTAAAGAAGATGGCAATCCTAGCCCAATGA
GGACCCCAAGGAAATCATGGTCGACCGAAGAAGATGCCATAATACAATCT
GCTTTGTCTAATGGGACTCCATTCAAAGACATTAACGTTGACGCAAGTCC
TCGACAGATTCGTGACCACGTGAGGCATATTAAACGTAAAGGCCGAAACA
GCTCGGACAAAGAGAGAGTAACAATACCTGTATCTGCAACGCTTAATGAA
GAAGATGAACATGATCACAGCACGATACGGATGGCCCCTAGGTCTCCTCC
AAGGATGGAAATATTTCACAATGAAGAAGATGAACATGATCACAGCACGA
TACGGATGGCCCCTAGGTCTCCTCCAAGGATGGAAATATTTCACACTGAG
GGAGATAGACACTCTTTATGGCCGCCAGTTGATGTGCTAACACTTGAAAA
ATATGGTCAAGATTTCATTGACAAGAAACAGAAAATGAACGATAAATCCA
TTAAACAACTGACTGAGGGAGATAGACACTCTTTATGGCCGCCAGTTGAT
GTGCTAACACTTGAAAAATATGGTCAAGATTTCATTGACAAGAAACAGAA
AATGAACGATAAATCCATTAAACAACTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_021895XLOC_021895-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063_pilongenomesc0000063_pilon:536929..538869 -
Properties
Property NameValue
Aaloc298-414:118
Aaloc223-297:1218
Aaloc1-222:1942