XLOC_021852 (mRNA) -

Overview
NameXLOC_021852
Unique NameXLOC_021852
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000398_pilon:165158..165784+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021852 ID=XLOC_021852|Name=XLOC_021852|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=627bp|location=Sequence derived from alignment at sc0000398_pilon:165158..165784+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTGGATATCATTTCAGTCCAACCAATACAGGTTCTTGTACAGAGTGAG CAAAACAACACCAAGCGATGAAGAAAGGAAAATACCCAACTCAAAGATTC AAACATCTAATAAAAATGTTGGATGCCGCTGTGGTCAAGGCGccaaaagg aaacaaaaacagGTTGTGTCCTGCAAAGAATTCAGATCAAGATGCCCTTG CTACCAAAAAGTTCGCCCGTGCACTGATGAGTGTAGTTGCATTGGCTGCG AGAATCCACACGGTGTGAAAAGTAATGTTCAAATTCCTGTGAAAAGTGCC ACCCGTGTCAGGCGGCAGCACAACTCGACCAAGAATATCTCAGGTAAAAG CTTTCTTCAAATGAATCATTGCGAGGCGCCtgagatattcaataggttag AGGAGTTCGTTCTACATGAAATTACTAATTTGATTCTACACAAAGAGGAC TTGGATCCAATGTTTTTGCACAATTTTTACAATGGTATTGCAAAATCCCC TGAAGGTGTTTTGTTGGGACTTCgagaaaaatcggaaaaatgcttgaaaa agaaattggaaattatgaaaaataatggACTTTTGTGTCGAAAACTCATT TTAGAACAGGGAAAAATTATCATTAAA

Coding sequence (CDS) from alignment at sc0000398_pilon:165158..165784+

>XLOC_021852 ID=XLOC_021852|Name=XLOC_021852|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1254bp|location=Sequence derived from alignment at sc0000398_pilon:165158..165784+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTGGATATCATTTCAGTCCAACCAATACAGGTTCTTGTACAGAGTGAG
CAAAACAACACCAAGCGATGAAGAAAGGAAAATACCCAACTCAAAGATTC
AAACATCTAATAAAAATGTTGGATGCCGCTGTGGTCAAGGCGccaaaagg
aaacaaaaacagGTTGTGTCCTGCAAAGAATTCAGATCAAGATGCCCTTG
CTACCAAAAAGTTCGCCCGTGCACTGATGAGTGTAGTTGCATTGGCTGCG
AGAATCCACACGGTGTGAAAAGTAATGTTCAAATTCCTGTGAAAAGTGCC
ACCCGTGTCAGGCGGCAGCACAACTCGACCAAGAATATCTCAGGTAAAAG
CTTTCTTCAAATGAATCATTGCGAGGCGCCtgagatattcaataggttag
AGGAGTTCGTTCTACATGAAATTACTAATTTGATTCTACACAAAGAGGAC
TTGGATCCAATGTTTTTGCACAATTTTTACAATGGTATTGCAAAATCCCC
TGAAGGTGTTTTGTTGGGACTTCgagaaaaatcggaaaaatgcttgaaaa
agaaattggaaattatgaaaaataatggACTTTTGTGTCGAAAACTCATT
TTAGAACAGGGAAAAATTATCATTAAAATTTGGATATCATTTCAGTCCAA
CCAATACAGGTTCTTGTACAGAGTGAGCAAAACAACACCAAGCGATGAAG
AAAGGAAAATACCCAACTCAAAGATTCAAACATCTAATAAAAATGTTGGA
TGCCGCTGTGGTCAAGGCGccaaaaggaaacaaaaacagGTTGTGTCCTG
CAAAGAATTCAGATCAAGATGCCCTTGCTACCAAAAAGTTCGCCCGTGCA
CTGATGAGTGTAGTTGCATTGGCTGCGAGAATCCACACGGTGTGAAAAGT
AATGTTCAAATTCCTGTGAAAAGTGCCACCCGTGTCAGGCGGCAGCACAA
CTCGACCAAGAATATCTCAGGTAAAAGCTTTCTTCAAATGAATCATTGCG
AGGCGCCtgagatattcaataggttagAGGAGTTCGTTCTACATGAAATT
ACTAATTTGATTCTACACAAAGAGGACTTGGATCCAATGTTTTTGCACAA
TTTTTACAATGGTATTGCAAAATCCCCTGAAGGTGTTTTGTTGGGACTTC
gagaaaaatcggaaaaatgcttgaaaaagaaattggaaattatgaaaaat
aatggACTTTTGTGTCGAAAACTCATTTTAGAACAGGGAAAAATTATCAT
TAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_021852XLOC_021852-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000398_pilongenomesc0000398_pilon:165158..165784 +
Properties
Property NameValue
Aaloc508-618:517
Aaloc442-507:445
Aaloc127-441:121
Aaloc46-126:37
Aaloc13-45:1