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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000259_pilon:349391..354346+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021773 ID=XLOC_021773|Name=XLOC_021773|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4956bp|location=Sequence derived from alignment at sc0000259_pilon:349391..354346+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAGACCCTGAAGCTGGGATCACCTTGACCAATCACACCGTTGGTGC
AGAACATTTCAAAATGTGCTTCTCGGGTAAGCTCAGACTACTCTTTAGTA
TGACTGTGTTAGATGATATAAGTAACTTAAACGTTCCCCATACATATAAG
ATTCTCGAATTTCAATTCTTCCTTAGGACCATGGCTGGGACAACTTTTAA
AGCGGGAGTTGATGTCTAAGGTGACTTGATTTTTACAAGGGAGTTGAGAA
AAAAGCTTGacgtgacaaaaatttttttactttgcaGGAGAGGACTTGAT
CTCATGGCTATTATCCTGGGCGTTCGTTCAATCTCGTGAAGAAGGGCGTA
TCGTGGCGGGTCAGCTCTTGGAGAAAGCCTTCCTGCATCCTGTCGGAcct
gaattagaaaaaagttttaaaaggaCCGCCTCAAGAATGGCGTTTGGGGA
TGGTTCATCTAATCTTTATCGCTTTGTAAGCACATCCTAATCCATTTTCA
TCTCTTTTGTTAAGTAAGGTTTAAGaaagacaaaatatttaaaagcgCCA
ACTTTATGATTATTATATTAAGCAGCGCAGTATTTCTTAAATAAGTATGT
TCTGCAACGTGTTTCTGTAGGATCTTCTAAAATACGAGACGTAATTGGCT
GAAACTAGGCTCCGTGCATCcccgaaatttattttgatattcatgatatg
caccattgcaatgtcttctgacattacatcacggacccaatagctggtTA
GTTgtacgtaaaatcagtcaatacgtcacttgcaaccaatccgttgttgg
gtccgtggaagacattgtaatggtgttGTATTGCTATTGTCGCGCGGGAA
GAGGTTGTGCACGGTTCTCTTCTGGCGCGATAAgcgaatatttattttta
tgccTCAGGCGTTTAAGATCTGACCCGCCGCTAGAAGACGGGGAGGACTT
GAATGTACAGTGGAATTCAGAGTGACAGTAGAACAAAGTAGACAAGAGTT
TTTCGGCTCGTGCATATTTATTTCAATTCATTCAGATGATAAAGTAAAGT
TACAcacaataaacaaacaaatttaaatgtcaatatttcaCCTGCGTTCA
GGCGTCGCCGCTCACTGCAGTTTATTGCGACTTGGGTTTTATTATTAACT
CTGCGCGAGAACCCCATAACTCCGCAGTTCACTTCGTTTGATTCACCACC
TGTCTCACCCAGGCACTTTCCAACCTTACGGTCCAGTCTCTAAACGACTC
TGCTTCAGCATTCTTTGTGAATGCGCATGGCAGTCAGACCGGGGTCAACG
GGGTCCACTTGTGGAATCAGGCTAACCTAGGTCTGATGGCCACGCAATCC
GTGATTCCTCAATACGTCTTGTTCGAACGAACGCTCGCTGAAGAATATCT
GAATTTCTATATCTGGTTGAGATATTTTTATCTCATGCATAATGCATATT
TACAAACATTCAAAcatacaaaattctatttataaGTCCCTCATGACACT
ATAATgcataataaaaaaagaaaaaaaaaagaaagatgggGGAAAGTTGT
GACAGAAATATTgtagacgatacgcatcccctatataaAATCAAATCAGA
gaggatgcgtgcagcctaggcTAAAACTGACTAACCTATAACATTTTCAG
TTCGCGTTCGTCTTTATACCGGTAGTCTTAACCATACTATTGACAAAGCT
GCAAAGGGATTTCATCGCTCCCAATATTACTCGTCAACACCATGTCTTTC
TTTCTTTGCAGTCTTTGTTGCATACCAACAGTTCACTGGATGTGGATTTC
GATCTGTCTGATTCTTCTGATGATTCGGACGATGACGGGGTGAGTTTTCC
CAATTTAACTGATTATTCAAttcgtttttcttcttatttatTCATGAGAT
ACTTCAACTATTTTTATTATGAATTTTATTTATAGGTTTTGGATAACTTC
CAAGGAAAGATTATCAAGCAAGGATTTCTTGTTAAAAAGGTAAACTTTAA
CGTTCCAACAGCTGGGCAACAGTGTACCTAAGAGAAGAAATATCGGTGCA
ATTCGGCAGAGTTTATGATATATAGCAAAAGTCAATTATTgcgaatgaac
aaaaaattacagtatgtggctcccaaaacggcgatcaaatttgaaatttc
tctcaaatctagaggaaaagagattttacaaaaatttttgctgcatgaaa
acctttaacatctttactttatttcctggaagttctttttcaaaattttc
aatttcaacaatatttttcaatcgcttaaagataggtagcttttttctaa
tggcccccaaaacggaggtttgaaattttagcgatttctcgagatatctt
taaaatatgaatacaaaattttgaccatagttttgaaatatggtttagag
ggttttgggcataaatttgtttgataaaaattttacagtatacaatgccg
gacaaaaggttgtagacaaatggaatttcagtaaaaaatgatgagaaata
gagcaaaatgactcttcaatgtgtctgcaaggggatggaagttaagaaaa
acacttttgaagtcgttgcattacttttgaattgcttttgagggaaccac
aagcaaaaaatcagcgttttgatactggtgtaagccagttaatcaagccc
ttgtggttattacagaagtctacaaaccttttgtccagcattgtacccct
ggttgtcaaaatgcaggtttggggcccccaaaacggaggtgtagttaaaa
tctaattattaattattaagcccagtggtaatagggggaaaaactatgaa
catatttgtgttttcccttaaatttacgacccgatggatgtaaaatttat
gatttttatgaaatatttcaagatttttgatattgcaaagtccaaactga
aaaattagaaattttcaaaatgacaatattGATTTAAcaactcttttgaa
aatagttatattcatgtatggaataagctgtgaaaattttagaaaaacag
cttaactgaaaccgaaaatattaagctttaaagatatttttctcctatat
tttgcaaaaaaatgacagaatttgccgttttttctgattcagcgaaaaaa
tttatatataatgttaattttttttataaactattaactcaaggtgatag
gaatagaattccaagattttttgctttttctcatatttagaattttcggt
tttgtcaatgcggATTCTAGGGCTCCGAAATACTGgctgaccttcaagat
gctatatcttttaccaatcTTCTAAAGTCaaagatgtatctgcattttct
gaacgacattaggtgtagaaagtttcctataccccgttttcataacttat
tttcaatatccaaggagctagggtgagttatatgcaatttttatctaatt
ttggtgttaaaatatttcctttagacgcaaatatgttattttgaattcaa
aataaactaaaatcgtttaattctgataaatctacaagtcagaatcttca
ttttaatgaaaacctccgttttgggggccgtctccgttttcggggccata
tactgtagtagTTCTTCCCTCAATGTGTGaccttattttattttttttta
agaacgaCGAGTATCataaagaaactttcaaattgTTATTTAGGGTCAAG
TGCGACATAATTGGAAAGTGCGGAAGTTTGTTTTGTACGATGAACCAATG
AAACTTGTCTACTACAGCCCCACCAAGGTACTCACCCTCATGTGTGATCT
GAAAAGTCAATCTTTGATTTCTCTGTAAGAGGAGTACTTCCCTGTTCTAA
CAAGCTAAATTAAGTTAGACAAATGATGTGCGATATTTCCTAAGGAAATT
TACCAAAACCAATTTCCTGTATTTTGAAaggaaactttccaaaaacaatc
tcttgtatttttcaagggaaataacctaaaacaatttttttattcctcaa
gaaaaattatttaatcaatctcttgtatttctcaaggaaaattacCAAAG
CAAATCTCTTGTAAGGGCTTTCCAATTTCTTTTCTTGTACAGTCAGAGAA
GAAAGGACGCATCAAATTATTCGGAAGTGAAGTCAACGTTttgaatgaag
aagaagatgaagatgcTACTTGCGCCAAAGGTATTTTGGCGATGCTTATG
TTAAAAGTTGGAACCTACTAGGGTTGATTGAGTAGAGCTGGCTTGCTCGC
TGGAAGTTATTTCTTGTCTACTGTTTCATAAGTGAAAACTAGAGAGTTTT
TTCCTTCCCTAGAAATATTCGGCTGTTGGGTCCCTCTTCATCACATAGAT
TACTATTAATAAACCTTTCAAAGTGCAATGAATGACTGGAACGTTTTGCC
CTCAAGAAGACAATTATAGGCAATCTGTCTTAGAAGATTATTATGAatga
ttttcctttgaaaatacaatatttggacagacagacagacagacagacag
acagacagacagacagacagacagacagacagacagacagacagacagac
agacagacagacagacagacagacagacagacagacagacagacagacag
acagacagacagacagacagacagacagacagacagacagacagacagac
agacagacagacagacagacagacagacagacagacagacagacagacag
acagacagacagacagacagacagacagacagacagacagacagacagac
agacagacagacagacagacagacagacagacagacagacagactaTTGA
TCATTATTCGATGTTCTTAACCCTCATAATGTGTTGTtatattttcctgt
ttttcttcttcaggagCGAAACGAATAGTTAGGGAACACTGCCTCGTCTT
ACGGACGAAGAAGAATACGAAATATATTCTTCAAGCGCCTTCTCTCGAAG
AAATGAGGGTTTGGGTTCGGACTCTTGAAGGGCTTTTCGATAAATACAAA
ACTTGA Coding sequence (CDS) from alignment at sc0000259_pilon:349391..354346+ >XLOC_021773 ID=XLOC_021773|Name=XLOC_021773|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1422bp|location=Sequence derived from alignment at sc0000259_pilon:349391..354346+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAGACCCTGAAGCTGGGATCACCTTGACCAATCACACCGTTGGTGC
AGAACATTTCAAAATGTGCTTCTCGGATGCAAGACCCTGAAGCTGGGATC
ACCTTGACCAATCACACCGTTGGTGCAGAACATTTCAAAATGTGCTTCTC
GGGAGAGGACTTGATCTCATGGCTATTATCCTGGGCGTTCGTTCAATCTC
GTGAAGAAGGGCGTATCGTGGCGGGTCAGCTCTTGGAGAAAGCCTTCCTG
CATCCTGTCGGAcctgaattagaaaaaagttttaaaaggaCCGCCTCAAG
AATGGCGTTTGGGGATGGTTCATCTAATCTTTATCGCTTTGAGAGGACTT
GATCTCATGGCTATTATCCTGGGCGTTCGTTCAATCTCGTGAAGAAGGGC
GTATCGTGGCGGGTCAGCTCTTGGAGAAAGCCTTCCTGCATCCTGTCGGA
cctgaattagaaaaaagttttaaaaggaCCGCCTCAAGAATGGCGTTTGG
GGATGGTTCATCTAATCTTTATCGCTTTTCTTTGTTGCATACCAACAGTT
CACTGGATGTGGATTTCGATCTGTCTGATTCTTCTGATGATTCGGACGAT
GACGGGTCTTTGTTGCATACCAACAGTTCACTGGATGTGGATTTCGATCT
GTCTGATTCTTCTGATGATTCGGACGATGACGGGGTTTTGGATAACTTCC
AAGGAAAGATTATCAAGCAAGGATTTCTTGTTAAAAAGGTTTTGGATAAC
TTCCAAGGAAAGATTATCAAGCAAGGATTTCTTGTTAAAAAGGGTCAAGT
GCGACATAATTGGAAAGTGCGGAAGTTTGTTTTGTACGATGAACCAATGA
AACTTGTCTACTACAGCCCCACCAAGGGTCAAGTGCGACATAATTGGAAA
GTGCGGAAGTTTGTTTTGTACGATGAACCAATGAAACTTGTCTACTACAG
CCCCACCAAGTCAGAGAAGAAAGGACGCATCAAATTATTCGGAAGTGAAG
TCAACGTTttgaatgaagaagaagatgaagatgcTACTTGCGCCAAAGTC
AGAGAAGAAAGGACGCATCAAATTATTCGGAAGTGAAGTCAACGTTttga
atgaagaagaagatgaagatgcTACTTGCGCCAAAGgagCGAAACGAATA
GTTAGGGAACACTGCCTCGTCTTACGGACGAAGAAGAATACGAAATATAT
TCTTCAAGCGCCTTCTCTCGAAGAAATGAGGGTTTGGGTTCGGACTCTTG
AAGGGCTTTTCGATAAATACAAAACTTGAgagCGAAACGAATAGTTAGGG
AACACTGCCTCGTCTTACGGACGAAGAAGAATACGAAATATATTCTTCAA
GCGCCTTCTCTCGAAGAAATGAGGGTTTGGGTTCGGACTCTTGAAGGGCT
TTTCGATAAATACAAAACTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000259_pilon | genome | sc0000259_pilon:349391..354346 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 571-711:4816 |
| Aaloc | 481-567:4043 |
| Aaloc | 397-480:3644 |
| Aaloc | 343-396:1936 |
| Aaloc | 265-342:1762 |
| Aaloc | 79-264:290 |
| Aaloc | 1-75:1 |
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