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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000376_pilon:42358..44960+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021751 ID=XLOC_021751|Name=XLOC_021751|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2603bp|location=Sequence derived from alignment at sc0000376_pilon:42358..44960+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCTTTCTCAAATAGGTCAGGGTCGTGTTACTACAACAGCACTCAC
AAACCACTCAAGATACCTGACAATAATCGATGATGAAAAGACGGCGCAGC
ACAAGAAAAAGACATTTCTTTGCGAGCAGCAACAGCAGGAGAATCATAAC
ATCCCAAAGAAAGGAACACGGTTGATGCATACGACCACTTTAATCTTAGG
GGATAAATCGAATATCACTCAGGAATACCGTTCTAATACAAAACATGTAT
GACATAAATTAGATTTACGCGTATTTCCCCTATCCCATCACCCATCATCG
CGGTGTTATCTATCgcatcaatatttttcaattttcactccAAGTTTTTC
CTCGAACTACAGAAACAGTCCTATGGAAGTGCATTCATCGagattgctca
aaataaggcgaAGATAAGACAGATTTTAGCCTTTCATTCGTCAATATTAG
TTCTCTTCAAAGTAAGTTTCCTTTATCTTTTAAATGCATTTAAGGCTACA
GCAGGTGACAATCCCGCGCGGGTATTTGGCATGTATATGGGATCGTGCCT
AATGCCACTTATCAATGATTAGATGGAcagaaaaataatcaaagtaAATA
ATTATACTTTTCAATGTAGAGTTTCAGCGGGAAAAAAGATCTATTGCCTT
GTATTCAACGAAGACCTTATCCCTCGCAGCACAAAAATCATTTCGTGATT
GGAGATAAATCAATGGCAGCATTTACAGAACATCCTAAACGATTCAATTT
TGCTACGATACAACAGGTAAAGACAATACTTAATTCAATAATAAGGTCGA
AATAAGTTCAATCGATTTGAGTTACTATCAAAATCAAAGCATtcacatta
ttttttcaaaaatattacaaaaattttacttgacatgttttttttataag
caagtgtatgccccttggtcaggcccgtgtatgcttaagctttcaaagca
tccaggcatagcttatgcttattataaATTATGCTTATAATTCAcctcga
gccaagtttttagtgaaatttcagaaattttgttcagattttgggagtag
tggaatgtagctagccgtggaacgtcttttattttacttgacctctaacc
aaacctttttaaacagataaaaaatgacaacttatttcaggctgacatac
gctatgcttaggaattctgcaaatctgggccttcgtatgcttataaaaaa
aacatgtatggaaatttttaagatacttttccaaaaaaatcaattatttt
tctaataataacttccaggaaaaattttcccaaaaagtgaaaaaaataga
aaaaatgttacttcagattttttggtttttacacTACCACCCTGCAGAAA
CTTAAATAATCTATAAAGCAAATCCAAGTCCCATCCTCTTGTGGTTTTAG
GGCAATTGGGTATAGTCGAATCTTATACTGTAAGGATTGGAAGCCATTAT
TATTGATGCGTATAATtctctttcaaaagattttataagcaaaaaaggac
tatgaaaaatctttctctgCGTACTTACATTTTTCATTGacccctacccc
cccccctgtacgcaagcatcaTACGCTTTTAAGAGACCCCCTCTCCCTTA
gtgtgtacgtactatgtggacggcccgaAATGCGGCGGAAATTTTAAGTG
ATCATTTTTGCTTCCCTAAGAACGATTCCTCTTTATCTTTGACTCAATGT
TTTAGGGTTAAGACTGTTAATACAAATCCACACTCTATGGTTTTGATAAT
TTGGCTCATCAGATCTTGTTTTGAAGCTTGAACATTATTTTACGTTTCTC
TCATTTTAGAATCCACATTTACTTGGCATTAGCCAGACACATAGAGCAAT
AGGGTTTCACCAAATGAAGGGTTCTAACATGCTGCAGTCGTTATCTCACA
ATAATAACAAAGTAAGTGGTAGTTCTGTTGATAGATCCCATCCAACTCAA
TCTAAGGATCTAATGTCTTGGTTAAATGAATCGAGTATCTAGCCCCCTTC
CCGATAAGCCTCGTTTAAgtttatatatttattttatgaGCATTGCCATA
TGAGCCTGACAAGGAAGCAGTCGCTTTGTTTGAGAATAACACATGAAAAA
ACACAATTTGTTTCACTTCTAAATAATGTCAACTCGACcaaattcctttg
tttttttacgATTTTGATGACAAATCGCGTTCATCAGTAAAAGCAAATGT
GGTGCAAACTTTGGGTAGATAGAATATTGTTTTTGATGCTGATACTGATT
TGTTTGTCGATTTTTTCAGATACCTAGAAGATCTCCGACGAACTCATCAG
GCACGAATGTTATTAACCAAGGTTCAAAATCACCAGATCTGAAAAAAGTT
GTGAAAACCACTTCTTCAACATTCGATGTTATACGTAAAGgtaaaatata
atttaaaataaAGATGTCAAATTTGGTTTGAAAACTTATATCGTCTTATG
TATACATTTATTGTGAATTACTTATGGAgatttattacaattttaaccCT
CTTTTTCATTACAGGAAATACAAGAGCCAATCATCACTGTGTGTCAGGAA
ATAAATTTCTTCAACGAGTTCGAGAAAGTAATACAGAAAATTTTCTATCA
TGA Coding sequence (CDS) from alignment at sc0000376_pilon:42358..44960+ >XLOC_021751 ID=XLOC_021751|Name=XLOC_021751|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1410bp|location=Sequence derived from alignment at sc0000376_pilon:42358..44960+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCTTTCTCAAATAGGTCAGGGTCGTGTTACTACAACAGCACTCAC
AAACCACTCAAGATACCTGACAATAATCGATGATGAAAAGACGGCGCAGC
ACAAGAAAAAGACATTTCTTTGCGAGCAGCAACAGCAGGAGAATCATAAC
ATCCCAAAGAAAGGAACACGGTTGATGCATACGACCACTTTAATCTTAGG
GGATAAATCGAATATCACTCAGGAATACCGTTCTAATACAAAACATATGG
CTCTTTCTCAAATAGGTCAGGGTCGTGTTACTACAACAGCACTCACAAAC
CACTCAAGATACCTGACAATAATCGATGATGAAAAGACGGCGCAGCACAA
GAAAAAGACATTTCTTTGCGAGCAGCAACAGCAGGAGAATCATAACATCC
CAAAGAAAGGAACACGGTTGATGCATACGACCACTTTAATCTTAGGGGAT
AAATCGAATATCACTCAGGAATACCGTTCTAATACAAAACATAGTTTCAG
CGGGAAAAAAGATCTATTGCCTTGTATTCAACGAAGACCTTATCCCTCGC
AGCACAAAAATCATTTCGTGATTGGAGATAAATCAATGGCAGCATTTACA
GAACATCCTAAACGATTCAATTTTGCTACGATACAACAGAGTTTCAGCGG
GAAAAAAGATCTATTGCCTTGTATTCAACGAAGACCTTATCCCTCGCAGC
ACAAAAATCATTTCGTGATTGGAGATAAATCAATGGCAGCATTTACAGAA
CATCCTAAACGATTCAATTTTGCTACGATACAACAGAATCCACATTTACT
TGGCATTAGCCAGACACATAGAGCAATAGGGTTTCACCAAATGAAGGGTT
CTAACATGCTGCAGTCGTTATCTCACAATAATAACAAAAATCCACATTTA
CTTGGCATTAGCCAGACACATAGAGCAATAGGGTTTCACCAAATGAAGGG
TTCTAACATGCTGCAGTCGTTATCTCACAATAATAACAAAATACCTAGAA
GATCTCCGACGAACTCATCAGGCACGAATGTTATTAACCAAGGTTCAAAA
TCACCAGATCTGAAAAAAGTTGTGAAAACCACTTCTTCAACATTCGATGT
TATACGTAAAGATACCTAGAAGATCTCCGACGAACTCATCAGGCACGAAT
GTTATTAACCAAGGTTCAAAATCACCAGATCTGAAAAAAGTTGTGAAAAC
CACTTCTTCAACATTCGATGTTATACGTAAAGGAAATACAAGAGCCAATC
ATCACTGTGTGTCAGGAAATAAATTTCTTCAACGAGTTCGAGAAAGTAAT
ACAGAAAATTTTCTATCATGAGAAATACAAGAGCCAATCATCACTGTGTG
TCAGGAAATAAATTTCTTCAACGAGTTCGAGAAAGTAATACAGAAAATTT
TCTATCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000376_pilon | genome | sc0000376_pilon:42358..44960 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 619-705:2517 |
| Aaloc | 496-615:2270 |
| Aaloc | 394-495:1810 |
| Aaloc | 247-393:620 |
| Aaloc | 1-246:1 |
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