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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000179_pilon:333281..336757+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021712 ID=XLOC_021712|Name=XLOC_021712|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3477bp|location=Sequence derived from alignment at sc0000179_pilon:333281..336757+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTGGTCTCCTGTTTGGGAAGTTGTAATGTTTTCAATGGAAAAGTGTAA
GAAACTTTTGTTTATAAGCATGTCATTTACTTTTTCATTGACAGGATATT
GGCATGATTCGAATGGTTTCCCTCAGTTTCCCTAGCTCTCATAATGTttc
gaaaattgctaaaaaatagGTATTCAACGCCAGAGAACcaatcaagtata
taatattgcatatctatcaaatcaatcaatccaaattaaatgcaatcaaa
taCAATTAAATATTACACAGGAATTGACCATTCAATTAGAGAGCtttgac
aaaagattttcttttttttaacagCTTGATGCTGTTAAGAAGGGGAGTGG
TATAGCAGGTCTGTCGATaaaaaaagtcagaaagaaaaagaaattctcat
ttagattgaaacatttataaatcAGCTTGAAATTTCCCAATCGACTTCTT
CGAAGTGTCTTGTTCCCAAAAAGCGTGACAAAAATAATCTGTGTATGTCA
GCAGCGGTCactttgaataaattttggGTATTAGAATTGGAGGCCCGGCT
CAAAACAACATGTCCTCTGTGCAAAAGGAATTGCGTCAAATATGGCGAAG
TGAAAGAATATAAAAAGAACATTGTTCTTCATGGTTGGGTCATATCCTTT
AGATGACAtattaaaacttttcaaagtgaaatttgctaaaagattttttc
aagctgttaatgaaaaataaaatcttttgtcgaAGGCCTCTTATGGTTGA
caatagcctgggaatccaatcGTCAAACTTTGTTCACATTCCAGATTTGT
GATGTTTTTGTTAATAATATTTGACGCTTGGAAGAAGCAACTCGATTGCA
GGGATTCCAGCACAGCTGGTGTAGGACAGAGTCCTGGTGGGAGAAGTCCC
AAGAAAATTATGCCTTTTTGCGTAATTGAATGCTTATAATATAAATGCTT
ATAAtatatttgaaaacatttttcactcaattttcttttttccaaattta
tgtTACATAAAGATTGAGTTCCAAATCTAAAATCTCAAAGATTCAGAAAA
CCCTAAAAATATGCCTCAGGAGTGCTTAATTAACCATTATGGATTTACAA
CGGGTGAATTTTTTGCAAAGATCTTTCCACATCTTCAGAATCATACTGTA
TACTGTATTCATAAAGGCCTTTCTACATCTTCCTAAGAAGGCTTTATTAA
TTAATACCCactcaagaaaaaatattgcaACTTAAATCTCTCGCAGTTCA
GCGCAGTTCtgttaagttttgaaaaaaaattccaaatttggAAAGATGGA
ATTTCCACTTGGTTAAAAAATTCTTACGCATCTCTCCACATTGAATTTAG
AATGGAtgcaaaatgaatttatttctgatttctcCATGATAATCTTCTAG
TCATGGAGACTTACCAGGGTTGGTACTTGGGCAAAAGGGGTATATATACA
GGAATGTGCCACTGGTTAGGGTATATACCtttttttCACCATAGGGTTCC
CTTGCAAAAACACAGAAATAGAAAGATCAGTCCAATTTTGGGAATAAAAC
TTTGGGAATAAAAAATAGAACATATAACAGTAAGAATTTcggcaacattt
tttcaaaaattgagctGGAACACTCTGGTCATGATTTTACTGAATCATGA
TTGAAAATTCTGGAAAATTTAACTTTTTAGGGTAAAAATACCATTTATTT
CTAAATAAAACATTGAAGTTGAAGGACTTGGCAGTTCTATTTCTTTGTTA
TTATTTGTTTTGGCACGTCCAGGATCTAGCTCAGGGTCAATCTCTTTTAA
TTTGGTAGTGTGAGGACAGCCAGTTCTAcaccttcttttcttttgcttCT
ACATCTTTTTTGTGTTTATTGTAATAAAATGCTCTGTTTTCAGAAGAGTC
AGGCCATTCACTACTCAAAGGGATGAACTTTATTCTCTACATTAAAATTT
TGGCTCAAAAGCAACAACATCAAAAGTTAAAGCAGAATAAGCAtttggtt
ggtctttctcattttattttaatgtttttactgcctcttgttttgttttt
ctatgtttgtAAAACCAAGATTGGATAATTAGttcaaatcaagaaaatat
aCACATTAAGTCTAGGCTAATCATGTCGATATTCAGCTACAATTATCTTT
GATACCACCGTATAATTATTAATTACctttttttttgtattgtttCAGCA
ATCTGGACTCAGGTCAAAGAGTGTTTGAAACCTGTCCTCAAGAAAAAGTC
AAGCGGCAAGagtaaatgtttgaaaaaattcaaagagaAGTTCAAGGTTA
GTATATTCATCGTCAGATAAATTGAATCAGCTATTTATCCCTTGTTTATT
TCTTTATGAATTTCTGCATATTGCagtaaattaactgaaaacaTTCCATT
ATTTCAATAGaaagagatttcaaaaatgattgcaTATGAAAGTATTGAGA
ACACCCTGGAAAAAGTTGGAAATGATTGGTCATCTAAGTACAAAGTAAGT
GATATTGTCATCTAAGTACAAAGTAAGTGATATTGCCTTGAGGGtcattt
gttttggttaaaagtGAGATCAATGATGAGttattaattgtttttttcat
tcttgatattttctacatttttctAGGTAACCTTAAAGCTTACTTTgaat
gaaagtttcaaaaaattagcTGATCTTACAGCTACTGCCGAGGTAAGCTT
GGTCTTTTACAGAGTTTCAGTTCCCTCCATCTGAGTTCTTTAAATCCCCA
ATCCCCCCTCGCACTAACAGTTTCCTTTGGGATTCCctccccaggcttgg
ccccctaaaATAAGTGAAATGtttattgaaaatgctcttGTACTGTATTG
TCAAATTGTTTACTCGTTAAAAACAATGATGAATCTATGCATTTCATCCA
TTCTTTTTTGTAGGACAATACATCGACAAATGATGACACAACTGGTACAC
CAGAAGAGAAAGATGATGAAGTTGAAGATGAAGTAATTTCTTAGTTTCTA
GTTCtttttttAAAGGTCTTTCCAATTTTCAACAGTTACAAGTAGTTTTC
GTTACGCTctgttcaaaaaaaaaagggaaagatttttactttacaaaatt
AGAGGAAATAAGTTCTAAAATCCTAAAGATGGTGAAATAGTATGATGAGG
TTCtatttagtgaaattttttttgggttttatgAAATCCTGATAAAACGA
TTCTGTATGACGAAGCAGTAATTGTCAATCAAAACAGCTGTAAGGGATTA
GACAGTGTCAGAAGATTGCATTGTAAAGAACGGAAGCAATTTTTACAAAG
CTGCATCTTCTAAAGACTGCCATTGTtggaaatttaaattaaaacttCAA
TCTTTGCTTATTTGTATAGGTATTACACCAGCCCCGCAAAAAGTTCAAGT
GGACAATACAGGATGATAGTGGGCGAAAGCTCTCAAATgcgaaaaatcaa
attaaatggTTAGAACATGTCAATAAA Coding sequence (CDS) from alignment at sc0000179_pilon:333281..336757+ >XLOC_021712 ID=XLOC_021712|Name=XLOC_021712|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=942bp|location=Sequence derived from alignment at sc0000179_pilon:333281..336757+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTGGTCTCCTGTTTGGGAAGTTGTAATGTTTTCAATGGAAAAGTTTTT
GGTCTCCTGTTTGGGAAGTTGTAATGTTTTCAATGGAAAAGTCAATCTGG
ACTCAGGTCAAAGAGTGTTTGAAACCTGTCCTCAAGAAAAAGTCAAGCGG
CAAGagtaaatgtttgaaaaaattcaaagagaAGTTCAAGCAATCTGGAC
TCAGGTCAAAGAGTGTTTGAAACCTGTCCTCAAGAAAAAGTCAAGCGGCA
AGagtaaatgtttgaaaaaattcaaagagaAGTTCAAGaaagagatttca
aaaatgattgcaTATGAAAGTATTGAGAACACCCTGGAAAAAGTTGGAAA
TGATTGGTCATCTAAGTACAAAaaagagatttcaaaaatgattgcaTATG
AAAGTATTGAGAACACCCTGGAAAAAGTTGGAAATGATTGGTCATCTAAG
TACAAAGTAACCTTAAAGCTTACTTTgaatgaaagtttcaaaaaattagc
TGATCTTACAGCTACTGCCGAGGTAACCTTAAAGCTTACTTTgaatgaaa
gtttcaaaaaattagcTGATCTTACAGCTACTGCCGAGGACAATACATCG
ACAAATGATGACACAACTGGTACACCAGAAGAGAAAGATGATGAAGTTGA
AGATGAAGACAATACATCGACAAATGATGACACAACTGGTACACCAGAAG
AGAAAGATGATGAAGTTGAAGATGAAGTATTACACCAGCCCCGCAAAAAG
TTCAAGTGGACAATACAGGATGATAGTGGGCGAAAGCTCTCAAATgcgaa
aaatcaaattaaatggTTAGAACATGTCAATAAAGTATTACACCAGCCCC
GCAAAAAGTTCAAGTGGACAATACAGGATGATAGTGGGCGAAAGCTCTCA
AATgcgaaaaatcaaattaaatggTTAGAACATGTCAATAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000179_pilon | genome | sc0000179_pilon:333281..336757 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 364-471:3370 |
| Aaloc | 295-363:2914 |
| Aaloc | 229-294:2627 |
| Aaloc | 145-228:2411 |
| Aaloc | 49-144:2201 |
| Aaloc | 1-45:1 |
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