|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000531_pilon:55602..58582- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021608 ID=XLOC_021608|Name=XLOC_021608|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2981bp|location=Sequence derived from alignment at sc0000531_pilon:55602..58582- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATCTCAAGGTAGTGGATGCAATATCGGTCTCGGCAGATTTCAAGG
TTTTCGTCAGCTTTATGATCACTCAATTACATCGCACCATAAAGAAGCGA
TTCAATTTTTTGAAAGGTCAGTCTGTCAGGACTTTTCAGCAAGTTTAAAA
AAGAAACCAGATCAATACATCAGTAATTACTTCAAGTCGACTGGAAAAGG
AAGAACAGTAGCATGTCATTTTTTCTGGGATCATCATTTTGTTCAAGAAT
TGAAGGATAAAAGAAACATCCGAAGTATGCAGCCCAAAACTCTCTTCAAG
AAAAAAGAATTGTGGAAAAAATGCGCTCCTGAACATGGCCATGCTGTTTG
TTCCAAGTTTGATAAATGGCGGGAAAAGCATCCTCAAGACTACAATGAAC
TCAATTACGAGTCAAAGCAATCATACAGGTCTGTGTTTGTACCTGGTAAG
TCGGTCATCATATTAAATGGTAAAACTCTTGAAATTGACGGAGGCATTAA
ATCTTTGGATCCTCCATGTTTGGGTACTGCTTTCAATGTTGGTCCGCATC
CATTTACATGTATCAATTGCTATGCACAACGAGTTTCTTTCAAAGATCTC
ATTTCCAAGCGACAAAATGCTTCCTTGCCAACACGTGAGTCAAGAATCGG
CCAAAGAGGTTTTCGAACTTCTTATGCAACTAAAGAAGAAATGGACGAGT
ATAACATCAGCATCGAGAAAGAAAACAAGGAACTGAAGTTGCAAAACAAA
AGACTTTCCAGAACCCTTTATAGCAAAAAGGCGTGGCAAAAAATTCTAAT
GCAGTCCTATCTGGATGACGACATTAAGAAAATGACTATCGATCTCATCT
CACTCTTTGAACAACGCGATAAGCGGGAATCCATACAGTTTGCTTTACTG
AAGAATCTGCTCCTAAAAATGAAATCTGGGGTGAATCACAAGTTTACTTT
GCTGATAAAAAACGTTGCGTGCCTCTATAAAAACCACCTTGGAACCACCA
ATTATAGTCTTTTACAAAGCCTTTTTGGATTGCCAGGAAAAACATGTGCT
TCTGACCATGCGAAACCTGCGAAGATCAACCTTGGATTCAACAACAACGC
CATTGAAACTGCTACTGAGCGGTATGCTAATCGTCCTGTTGTGGAATGTT
CCGACGAGGCAAGAACATTGCGTTATATTTCTCCACTCATGGACCAAAAT
GGCAAAATTGAATTGATAGGTCAATGTTGGGACGCTGATTTGAACCGATG
GAATGACGAAAGAAAGTATTTAGATGATATCCTTTCAAAGAATTCAATTG
ATCAGTACTCTGCTTTGAAAGATTATGTGGATGGAATTATTAAAACAAAT
CAACTTGCCAAAGACACCGCAATCCACAATTTTACATCAGGATCTGGAAT
AGCGAGTGAACCAATTGTGTTCCTTGTATGGCCAACCCCTAACTCTGGTT
ATTGTGGTCCCCATCTACTTAAGATCTGGGATGTGATTAGAAAAAATCTT
TTTTGAACGAAGACAATAGCTTAAAAATCAACCCGTTGAATTTGATCGGT
CACTCGACCGACTCCGCTGGCTTTCAATTGGCAGCCGCATTATCCTTGAT
GTCCCCCAACAAGGAAGCTATGAAGGAAGGCGTCAAGTACTTAACATTGG
GCATTGGAGAAAGTTGTTATGCTTCACCCTACTTCGGTCCATTGCCTTCA
ATAGCATTTCTCGATTACGACCATGGATTGCGCCTCTTTTTGAGATGTCT
CAAATACAATACGTTGGAAATGAACTTTTTCCCGAACCCCAAAGTGACAT
ACAGTGCTGCCATAACGCACCTGAAAGAGTTAAAACTAAAGTGCGACGAA
ACGGAAAGTTCATTAGAGTGCCCGTTCAGCAACAATGATTTGTTGTTTGC
GCGTTACCTAGATCAAAATTGTGATGCTGCAATTAAAGTATTTCAACCTA
GTGTCGCTGATATGCTGGAAAAAAATGTGAACGGAGCAGAGGGGACTGTG
CTTTACTTGCGTGCCGTCATCTATTTGTTCGAGCCCTTTTTAAACCCATC
ATCCGATCCAATATACATGCAAACAAGTATCTCAACTGGCATAACTGTCC
TGCGAATTTGGAGGAAGATACTTCAGCTTAAGAAGAAAAGATTGACAGCT
GCACCGAAAGCTGCAAAGGAGCCAGCAAAGAGAAGTTTCTTCTTAACTTA
TTGTTGCTACAAAACTGCGGAAATTTTATTTGCGAGTGCAACATCTTACA
TGCTGACCATTTTTTTACATTTCAAACATCTTGGCCCGACTGCGTTATCT
CCATTCAAATGTGGAACCAAAGCCACAGAGCGCATCATCAGTGAAGTCCA
GGGTAAGACGAACCAATTCCAGTCATTGGACGCCCAACCAACACTTTTGG
ATATCATTCATCGTGTTTCCAAAGTCCAGATGAACCATTTAGTGGAAGAG
GAACTTATTGCTGCAGGTGCCAAAAAGCTAAACTCAACAAATCGCCGAAG
ATTGTCTCATAAACTTCAAAGCGCAAAAGTAACAGAATACAAATACCCCG
ATACATTCCTGGAGTTTCTAAACCATCAACGGCAAGCATACAAAGATGGA
GTCAAAATGGGTGTTGAATTGTACAGGGAGTATTGCGAGGATGGAATTCA
ATGGTTGGAAAACCAATGCGGTCTTGATTTTCTGCATCAGAATGGTACGG
ATTCCATTCCTAAAGAAAACTGCTTTGATGGGTCTATTGACAATGTTTAT
GCACTTCGAATGTTGACAGAAATTAGTCCATCGATCCTTCTAACACAGTC
TGTTATGGATAAGGAGAAGAAGATAAATGAATATTTCAAGGCTGAACGCG
AGTCTGAAGAGTTCGAAAGCTGCGGAGAAGAAAATATTGAAACAAATCCG
GAATCACCTAAACCTTCAACAACAGCCAACACAGAAGATACCGTCGAATC
TGAAGAACCTCAAAACAGTAAGTGGCTCATT Coding sequence (CDS) from alignment at sc0000531_pilon:55602..58582- >XLOC_021608 ID=XLOC_021608|Name=XLOC_021608|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5962bp|location=Sequence derived from alignment at sc0000531_pilon:55602..58582- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATCTCAAGGTAGTGGATGCAATATCGGTCTCGGCAGATTTCAAGG
TTTTCGTCAGCTTTATGATCACTCAATTACATCGCACCATAAAGAAGCGA
TTCAATTTTTTGAAAGGTCAGTCTGTCAGGACTTTTCAGCAAGTTTAAAA
AAGAAACCAGATCAATACATCAGTAATTACTTCAAGTCGACTGGAAAAGG
AAGAACAGTAGCATGTCATTTTTTCTGGGATCATCATTTTGTTCAAGAAT
TGAAGGATAAAAGAAACATCCGAAGTATGCAGCCCAAAACTCTCTTCAAG
AAAAAAGAATTGTGGAAAAAATGCGCTCCTGAACATGGCCATGCTGTTTG
TTCCAAGTTTGATAAATGGCGGGAAAAGCATCCTCAAGACTACAATGAAC
TCAATTACGAGTCAAAGCAATCATACAGGTCTGTGTTTGTACCTGGTAAG
TCGGTCATCATATTAAATGGTAAAACTCTTGAAATTGACGGAGGCATTAA
ATCTTTGGATCCTCCATGTTTGGGTACTGCTTTCAATGTTGGTCCGCATC
CATTTACATGTATCAATTGCTATGCACAACGAGTTTCTTTCAAAGATCTC
ATTTCCAAGCGACAAAATGCTTCCTTGCCAACACGTGAGTCAAGAATCGG
CCAAAGAGGTTTTCGAACTTCTTATGCAACTAAAGAAGAAATGGACGAGT
ATAACATCAGCATCGAGAAAGAAAACAAGGAACTGAAGTTGCAAAACAAA
AGACTTTCCAGAACCCTTTATAGCAAAAAGGCGTGGCAAAAAATTCTAAT
GCAGTCCTATCTGGATGACGACATTAAGAAAATGACTATCGATCTCATCT
CACTCTTTGAACAACGCGATAAGCGGGAATCCATACAGTTTGCTTTACTG
AAGAATCTGCTCCTAAAAATGAAATCTGGGGTGAATCACAAGTTTACTTT
GCTGATAAAAAACGTTGCGTGCCTCTATAAAAACCACCTTGGAACCACCA
ATTATAGTCTTTTACAAAGCCTTTTTGGATTGCCAGGAAAAACATGTGCT
TCTGACCATGCGAAACCTGCGAAGATCAACCTTGGATTCAACAACAACGC
CATTGAAACTGCTACTGAGCGGTATGCTAATCGTCCTGTTGTGGAATGTT
CCGACGAGGCAAGAACATTGCGTTATATTTCTCCACTCATGGACCAAAAT
GGCAAAATTGAATTGATAGGTCAATGTTGGGACGCTGATTTGAACCGATG
GAATGACGAAAGAAAGTATTTAGATGATATCCTTTCAAAGAATTCAATTG
ATCAGTACTCTGCTTTGAAAGATTATGTGGATGGAATTATTAAAACAAAT
CAACTTGCCAAAGACACCGCAATCCACAATTTTACATCAGGATCTGGAAT
AGCGAGTGAACCAATTGTGTTCCTTGTATGGCCAACCCCTAACTCTGGTT
ATTGTGGTCCCCATCTACTTAAGATCTGGGATGTGATTAGAAAAAATCTT
TTTTGAACGAAGACAATAGCTTAAAAATCAACCCGTTGAATTTGATCGGT
CACTCGACCGACTCCGCTGGCTTTCAATTGGCAGCCGCATTATCCTTGAT
GTCCCCCAACAAGGAAGCTATGAAGGAAGGCGTCAAGTACTTAACATTGG
GCATTGGAGAAAGTTGTTATGCTTCACCCTACTTCGGTCCATTGCCTTCA
ATAGCATTTCTCGATTACGACCATGGATTGCGCCTCTTTTTGAGATGTCT
CAAATACAATACGTTGGAAATGAACTTTTTCCCGAACCCCAAAGTGACAT
ACAGTGCTGCCATAACGCACCTGAAAGAGTTAAAACTAAAGTGCGACGAA
ACGGAAAGTTCATTAGAGTGCCCGTTCAGCAACAATGATTTGTTGTTTGC
GCGTTACCTAGATCAAAATTGTGATGCTGCAATTAAAGTATTTCAACCTA
GTGTCGCTGATATGCTGGAAAAAAATGTGAACGGAGCAGAGGGGACTGTG
CTTTACTTGCGTGCCGTCATCTATTTGTTCGAGCCCTTTTTAAACCCATC
ATCCGATCCAATATACATGCAAACAAGTATCTCAACTGGCATAACTGTCC
TGCGAATTTGGAGGAAGATACTTCAGCTTAAGAAGAAAAGATTGACAGCT
GCACCGAAAGCTGCAAAGGAGCCAGCAAAGAGAAGTTTCTTCTTAACTTA
TTGTTGCTACAAAACTGCGGAAATTTTATTTGCGAGTGCAACATCTTACA
TGCTGACCATTTTTTTACATTTCAAACATCTTGGCCCGACTGCGTTATCT
CCATTCAAATGTGGAACCAAAGCCACAGAGCGCATCATCAGTGAAGTCCA
GGGTAAGACGAACCAATTCCAGTCATTGGACGCCCAACCAACACTTTTGG
ATATCATTCATCGTGTTTCCAAAGTCCAGATGAACCATTTAGTGGAAGAG
GAACTTATTGCTGCAGGTGCCAAAAAGCTAAACTCAACAAATCGCCGAAG
ATTGTCTCATAAACTTCAAAGCGCAAAAGTAACAGAATACAAATACCCCG
ATACATTCCTGGAGTTTCTAAACCATCAACGGCAAGCATACAAAGATGGA
GTCAAAATGGGTGTTGAATTGTACAGGGAGTATTGCGAGGATGGAATTCA
ATGGTTGGAAAACCAATGCGGTCTTGATTTTCTGCATCAGAATGGTACGG
ATTCCATTCCTAAAGAAAACTGCTTTGATGGGTCTATTGACAATGTTTAT
GCACTTCGAATGTTGACAGAAATTAGTCCATCGATCCTTCTAACACAGTC
TGTTATGGATAAGGAGAAGAAGATAAATGAATATTTCAAGGCTGAACGCG
AGTCTGAAGAGTTCGAAAGCTGCGGAGAAGAAAATATTGAAACAAATCCG
GAATCACCTAAACCTTCAACAACAGCCAACACAGAAGATACCGTCGAATC
TGAAGAACCTCAAAACAGTAAGTGGCTCATTATGAAATCTCAAGGTAGTG
GATGCAATATCGGTCTCGGCAGATTTCAAGGTTTTCGTCAGCTTTATGAT
CACTCAATTACATCGCACCATAAAGAAGCGATTCAATTTTTTGAAAGGTC
AGTCTGTCAGGACTTTTCAGCAAGTTTAAAAAAGAAACCAGATCAATACA
TCAGTAATTACTTCAAGTCGACTGGAAAAGGAAGAACAGTAGCATGTCAT
TTTTTCTGGGATCATCATTTTGTTCAAGAATTGAAGGATAAAAGAAACAT
CCGAAGTATGCAGCCCAAAACTCTCTTCAAGAAAAAAGAATTGTGGAAAA
AATGCGCTCCTGAACATGGCCATGCTGTTTGTTCCAAGTTTGATAAATGG
CGGGAAAAGCATCCTCAAGACTACAATGAACTCAATTACGAGTCAAAGCA
ATCATACAGGTCTGTGTTTGTACCTGGTAAGTCGGTCATCATATTAAATG
GTAAAACTCTTGAAATTGACGGAGGCATTAAATCTTTGGATCCTCCATGT
TTGGGTACTGCTTTCAATGTTGGTCCGCATCCATTTACATGTATCAATTG
CTATGCACAACGAGTTTCTTTCAAAGATCTCATTTCCAAGCGACAAAATG
CTTCCTTGCCAACACGTGAGTCAAGAATCGGCCAAAGAGGTTTTCGAACT
TCTTATGCAACTAAAGAAGAAATGGACGAGTATAACATCAGCATCGAGAA
AGAAAACAAGGAACTGAAGTTGCAAAACAAAAGACTTTCCAGAACCCTTT
ATAGCAAAAAGGCGTGGCAAAAAATTCTAATGCAGTCCTATCTGGATGAC
GACATTAAGAAAATGACTATCGATCTCATCTCACTCTTTGAACAACGCGA
TAAGCGGGAATCCATACAGTTTGCTTTACTGAAGAATCTGCTCCTAAAAA
TGAAATCTGGGGTGAATCACAAGTTTACTTTGCTGATAAAAAACGTTGCG
TGCCTCTATAAAAACCACCTTGGAACCACCAATTATAGTCTTTTACAAAG
CCTTTTTGGATTGCCAGGAAAAACATGTGCTTCTGACCATGCGAAACCTG
CGAAGATCAACCTTGGATTCAACAACAACGCCATTGAAACTGCTACTGAG
CGGTATGCTAATCGTCCTGTTGTGGAATGTTCCGACGAGGCAAGAACATT
GCGTTATATTTCTCCACTCATGGACCAAAATGGCAAAATTGAATTGATAG
GTCAATGTTGGGACGCTGATTTGAACCGATGGAATGACGAAAGAAAGTAT
TTAGATGATATCCTTTCAAAGAATTCAATTGATCAGTACTCTGCTTTGAA
AGATTATGTGGATGGAATTATTAAAACAAATCAACTTGCCAAAGACACCG
CAATCCACAATTTTACATCAGGATCTGGAATAGCGAGTGAACCAATTGTG
TTCCTTGTATGGCCAACCCCTAACTCTGGTTATTGTGGTCCCCATCTACT
TAAGATCTGGGATGTGATTAGAAAAAATCTTTTTTGAACGAAGACAATAG
CTTAAAAATCAACCCGTTGAATTTGATCGGTCACTCGACCGACTCCGCTG
GCTTTCAATTGGCAGCCGCATTATCCTTGATGTCCCCCAACAAGGAAGCT
ATGAAGGAAGGCGTCAAGTACTTAACATTGGGCATTGGAGAAAGTTGTTA
TGCTTCACCCTACTTCGGTCCATTGCCTTCAATAGCATTTCTCGATTACG
ACCATGGATTGCGCCTCTTTTTGAGATGTCTCAAATACAATACGTTGGAA
ATGAACTTTTTCCCGAACCCCAAAGTGACATACAGTGCTGCCATAACGCA
CCTGAAAGAGTTAAAACTAAAGTGCGACGAAACGGAAAGTTCATTAGAGT
GCCCGTTCAGCAACAATGATTTGTTGTTTGCGCGTTACCTAGATCAAAAT
TGTGATGCTGCAATTAAAGTATTTCAACCTAGTGTCGCTGATATGCTGGA
AAAAAATGTGAACGGAGCAGAGGGGACTGTGCTTTACTTGCGTGCCGTCA
TCTATTTGTTCGAGCCCTTTTTAAACCCATCATCCGATCCAATATACATG
CAAACAAGTATCTCAACTGGCATAACTGTCCTGCGAATTTGGAGGAAGAT
ACTTCAGCTTAAGAAGAAAAGATTGACAGCTGCACCGAAAGCTGCAAAGG
AGCCAGCAAAGAGAAGTTTCTTCTTAACTTATTGTTGCTACAAAACTGCG
GAAATTTTATTTGCGAGTGCAACATCTTACATGCTGACCATTTTTTTACA
TTTCAAACATCTTGGCCCGACTGCGTTATCTCCATTCAAATGTGGAACCA
AAGCCACAGAGCGCATCATCAGTGAAGTCCAGGGTAAGACGAACCAATTC
CAGTCATTGGACGCCCAACCAACACTTTTGGATATCATTCATCGTGTTTC
CAAAGTCCAGATGAACCATTTAGTGGAAGAGGAACTTATTGCTGCAGGTG
CCAAAAAGCTAAACTCAACAAATCGCCGAAGATTGTCTCATAAACTTCAA
AGCGCAAAAGTAACAGAATACAAATACCCCGATACATTCCTGGAGTTTCT
AAACCATCAACGGCAAGCATACAAAGATGGAGTCAAAATGGGTGTTGAAT
TGTACAGGGAGTATTGCGAGGATGGAATTCAATGGTTGGAAAACCAATGC
GGTCTTGATTTTCTGCATCAGAATGGTACGGATTCCATTCCTAAAGAAAA
CTGCTTTGATGGGTCTATTGACAATGTTTATGCACTTCGAATGTTGACAG
AAATTAGTCCATCGATCCTTCTAACACAGTCTGTTATGGATAAGGAGAAG
AAGATAAATGAATATTTCAAGGCTGAACGCGAGTCTGAAGAGTTCGAAAG
CTGCGGAGAAGAAAATATTGAAACAAATCCGGAATCACCTAAACCTTCAA
CAACAGCCAACACAGAAGATACCGTCGAATCTGAAGAACCTCAAAACAGT
AAGTGGCTCATT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000531_pilon | genome | sc0000531_pilon:55602..58582 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1495-2982:1489 |
| Aaloc | 1-1491:2982 |
|
