XLOC_021539 (mRNA) -

Overview
NameXLOC_021539
Unique NameXLOC_021539
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000312_pilon:74331..75517+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021539 ID=XLOC_021539|Name=XLOC_021539|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1187bp|location=Sequence derived from alignment at sc0000312_pilon:74331..75517+ (Clytia hemisphaerica_ch_hm2_pilon)
ttggaagGTGAAATCGAAAGTTCACCCTGCTCCTTAAACTTAGAAGTTCG ATCGAAAGGTATAACATACCATTTACGTAACATTCTTTTATAATCGTGTT CAATTGCAACGGTGTGCAAGTAAAAATGCTCAtttttttAATTACCGAAA CATCtttgacAttttaattttaatctttCAGGAAACGCTTTGCTGACAAA AGACGATGAATATAGCAAGGTCATAATCCAGGAAATCCAATCAAAGGGAG ATGGCGAAAATAGACCAGATGACTCTCAGTCAACAACGAAAGTCAAATTT CAGGTTAACGAGGTATTTTTGTTAATGAGTGCACTGTTTACAATTAGCTT ACCATTGAAATTGGATAATGAAGCTATTATCTCTTTGTTggaaccgtttt ttttttagaaattcttcagacagattttttttgattttgtttttccagAC TAGAACACTTTTCGTGTTGGATATTACagcttattttttaaattccgTTC AAATGATCTGCTTCGGAGGTAATTTGCTTCTCTATAACTTGTGAAATAAA CGTGCTCTCCTTTGCAACACGCCCTCCTCATAAACCCGTTAGCAGGATCT TTCAGACAGTTGGGGTTAAATAAAGGACAAAAACTCAATTGGGAAGATTG ATATATCCCATGTTTTCGAGCCGGAAAATTCAgtaaaaaatagcacaata ttttgcagtgacaATTTGCTTTTCTGATTATTTTATGGAGGacaaaatta gagtataattttcgaTTGAGGAcgatattttcatcaatttatcCAATAAG AAGTCGtcatactgggtctgtgagaagggggtgatTGCCATTGATTCCAA ACCCCCCGAAATGAATAATTCCGAAACTCCTTGATGggaagtgaagccac ttatttcaactgcagaaagaaaaacaagcatgaatttttaaatttttgtt ataaTCCATAAACAAGCAGtttttttAGTCTTTTATatctagattttctt ttcaattaaacCTTACCTTTATGTTTTAacgagaaatttcaaattacttC CCATTTATTAGCGAAAAGAAGATCGAGAAGCAAGCGAATCATTTGACCCA ACGAAGCTACGCGACCCCGAAAACGTTTTTAAGTCGCAGCCACAgatgaa tgaaaatgaagaagtcgTGAAAGAACTGTCCACTACA

Coding sequence (CDS) from alignment at sc0000312_pilon:74331..75517+

>XLOC_021539 ID=XLOC_021539|Name=XLOC_021539|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=630bp|location=Sequence derived from alignment at sc0000312_pilon:74331..75517+ (Clytia hemisphaerica_ch_hm2_pilon)
ttggaagGTGAAATCGAAAGTTCACCCTGCTCCTTAAACTTAGAAGTTCG
ATCGAAAGttggaagGTGAAATCGAAAGTTCACCCTGCTCCTTAAACTTA
GAAGTTCGATCGAAAGGAAACGCTTTGCTGACAAAAGACGATGAATATAG
CAAGGTCATAATCCAGGAAATCCAATCAAAGGGAGATGGCGAAAATAGAC
CAGATGACTCTCAGTCAACAACGAAAGTCAAATTTCAGGTTAACGAGGAA
ACGCTTTGCTGACAAAAGACGATGAATATAGCAAGGTCATAATCCAGGAA
ATCCAATCAAAGGGAGATGGCGAAAATAGACCAGATGACTCTCAGTCAAC
AACGAAAGTCAAATTTCAGGTTAACGAGCGAAAAGAAGATCGAGAAGCAA
GCGAATCATTTGACCCAACGAAGCTACGCGACCCCGAAAACGTTTTTAAG
TCGCAGCCACAgatgaatgaaaatgaagaagtcgTGAAAGAACTGTCCAC
TACACGAAAAGAAGATCGAGAAGCAAGCGAATCATTTGACCCAACGAAGC
TACGCGACCCCGAAAACGTTTTTAAGTCGCAGCCACAgatgaatgaaaat
gaagaagtcgTGAAAGAACTGTCCACTACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_021539XLOC_021539-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000312_pilongenomesc0000312_pilon:74331..75517 +
Properties
Property NameValue
Aaloc190-315:1062
Aaloc61-189:184
Aaloc1-57:1