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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000303_pilon:289507..292813+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021488 ID=XLOC_021488|Name=XLOC_021488|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3307bp|location=Sequence derived from alignment at sc0000303_pilon:289507..292813+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTTGTTCACGACTGCAATTCTTTTGGAGACTTTATTTACAATTAT
TTTTATTGGGGCCATCTTTGCATTTGGAGTTTGCTGCTACATTTTGTCGT
ATTTCATCTCATGGTTGTACATTGTTGGATTCCTCTCCCTTCTTTATTGG
TTTTTGGTCACCGAGAGAACTCCTTCACCACAAGAAATTCGAAAGCGTAA
AGATACTTTTGTTGTCATCGTCGGTGCTGGCTATTCCGGATTATGTGCGG
CTATTCGGTTGAAAAAAGAACGTATCCGCTTTGTTTTGATCGAGAAATCG
GAAACACTTGGCGGAACATGGTGGGATAACAAATATCCAGGGTGTGCTTG
TGACATCCCCTCGCATTTTTATAGTTTATCCTTTAAACTGAACGCGTTTT
GGACAAAGATGTATTCTTCAGGAGATGAAATTCAGGACTATTTAGAAGAT
ACAGCTGATTATTACGGCATCCGAGAACACGTCAAATTCAGTTGCAAAGT
TGACACATGTGAATTCAACAAAGAGACACAAAAATGGTCAGTCAAAACTT
CAACAGGTCACGAATTCGAATGCAATTATCTCATCTCTGGAATGGGAGCT
TTACATGTCCCTAAATTTCCCAGTTTGAAAGGAATGGAAGAATTTCAAGG
AGAGCATTTTCACACTGCTCAATGGAAAGACGATTTTGATTGGTCCGGAA
AACGCGTAGGAATTATCGGTACTGGGAGCTCTTCAATTCAAGCCGTACCG
AAACTCGCCGAACGTTGTGAAGAGCTTTACGTCTTCCAAAGAACACCAGC
TTGGATTTTCCCTCTCTTGAATTTGCGTTATCCAGCTatcattcaaaaac
tttttcaagcTTTCCCATTTGTTATGAAGCTTCATCggttatattttttc
ttcagatCCGAATTTGTATTCGCCGCTTTCTTCGGGAAAGTATCGTTAGC
CCGAGAGATTATCTCTAATCTGACCAACCAACTCATGTCGAATGAAGTTG
CCGATCCCAAATTGGCTGAGAAACTTATTCCTAAGTACTCAATGTTTAGT
AAAAGAATCACCATCTCGAACGattatttgaaaacttttaatcgACCAAA
CGTTCATCTCATCACTGAACCGATTCAAGAAATTACCCATAATTCTATTC
TCCTTAAAAATAACCAAGATGCATCAGCGAAAGAAGTTGAATTAGATGCG
ATCATTTATGCAACAGGATTCGACGTTTTGCAAAGTTCGACAAATATGGA
TATCAAAAACCCAAATAACGGAAAGTCTTTATCAACAATTTGGGGAGAAA
CACCGAATGCTTACATGGGGATCATGCCAGCCGGGCTACCGAACTTTTTC
ATGCTCTTCGGACCCGGAACTGTGCTAGGTAAGATTTGTATTGATGGTTG
TTGATCAGCTTCAGGGTTAGACTCTCACAAATTACACAAGCAAATAAATT
TCATGAATAAGCATGAGCTTGTATTATATGGATGAAAAAATGGATAAAGA
CTCGGGTTTGATTTTTATGTGTGATGAGTGTGTGTTTTTCATGTGCATGG
AAGATGAAGCTTTAATGAATCCATGCGATATTCATTTGCCACTACCGGCA
GAAATCACATCATCATGAATAGTATGAATCCCTTAatttcttcatgattt
cttttcaaatctatttcactttcattttttatttagggCACAGCAGTGCG
ATCTTTATGACGGAATGTCAAATAGATTTTATGATGAAGACGATTACTCG
ATCCATTGATAACAATTGTTCTTCTGTCGAGGTAAGTCACTGATCTCTTT
CTTTTGGTACCAGTCTATGCTGCCATCCACCAACGGATTagtactacctg
tggttttgtagaggtctgtatTCAGACtggttttctattttggtgttttt
tgcggccctacctgggactcatggaggtgaAAAGGTACCTTTGACCAGCG
GTACATCCCTGTACCCCTTATTGCTTAAGTCCCTCCCGGGTTTATGTACT
CTgcaccagagtgtatctcacgtttatcgcttacactctgtgcgcattgt
ctgttaaaaaattcccgtacggagacctctgcgatgaagtttgatttgtA
AATAGCAACACtactctcatcgtctcccctctctcaccaacactccatcg
cagcgttCAGTTTGaataatctcaaatgagaaaagacaatgacaacagac
cctctacggcaatagattttgaaatcagccgtagatattgggtctttctc
gaccgtagtcgcgcggtcaccctaaactcgatccatccaattctttttta
aacttttttctattgtctttagatgcgaaaaaaagactgggacggtttta
gggtggtaaaacggacaaaaattgcccgcgcggcaattggcgactacggt
cgaaaaggtgtattcataAGTTTGTAATACCTTAATTGGATCGAGTTCTT
TTATCTGATTTAATTATCAGTTAtagccactgacctttataattatatac
cctggacaaagcttctccatcccagccaagcaaaatctttgatcggagtt
ttttgaaaattggtaccctaatgtcggcactactcgatagcggtgtaaat
gcatcgagagcgctaggtctacttttcctcaaattcttttgatgatgtag
cggcgttaaacgttaatttttaacattgcaatggcttctccttgggtacc
aattctaaaaaatctccaatcaaagatggcagatattgtttggtccaggg
ttatataaaggtcagtggttataGCTATTGCTTTCGGTCCTCTTTTTCTA
TCGACTAATGTGTGACTATTTTCGCATACATAATTAGAATCATTGGAATG
ATTTAACGCAGGGTCAGCATATCCTGGCTCATTAAATCTAAGGTAACTCA
CAACTAAAGGTCTAATAACTTAACATGAAGATAAAGTTTCTAAGATTTAA
AAATGCACGTTTGAATGGTAGCCTTCCTGatttgcctcgttttcaaaaat
aatttatgggAAGTCGCTTTTGAACGCGAGGCCACGTAGCGACTGAGTCA
CTTCAGAAtttgtttagaatttttttgttttcgttttgcAGGTGACACAA
GAAATGAATGAGGGTTATCAATCTTACGTCACCGAAGGATTAAAGAAAGT
TGTTTACGGAACATCTCCTGAATGTAAAGGCTGGTATTACAACGAGAGTG
GAACGAATTATACTTTATGGCCAGCCAGTTGTTTGCATTATTGGTGGAAA
ACCTCACAGGTCAACTTCGAAGATTTTAAGACCACCAAGGCTTGTGACAA
GGAGTGA Coding sequence (CDS) from alignment at sc0000303_pilon:289507..292813+ >XLOC_021488 ID=XLOC_021488|Name=XLOC_021488|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3378bp|location=Sequence derived from alignment at sc0000303_pilon:289507..292813+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATTTGTTCACGACTGCAATTCTTTTGGAGACTTTATTTACAATTAT
TTTTATTGGGGCCATCTTTGCATTTGGAGTTTGCTGCTACATTTTGTCGT
ATTTCATCTCATGGTTGTACATTGTTGGATTCCTCTCCCTTCTTTATTGG
TTTTTGGTCACCGAGAGAACTCCTTCACCACAAGAAATTCGAAAGCGTAA
AGATACTTTTGTTGTCATCGTCGGTGCTGGCTATTCCGGATTATGTGCGG
CTATTCGGTTGAAAAAAGAACGTATCCGCTTTGTTTTGATCGAGAAATCG
GAAACACTTGGCGGAACATGGTGGGATAACAAATATCCAGGGTGTGCTTG
TGACATCCCCTCGCATTTTTATAGTTTATCCTTTAAACTGAACGCGTTTT
GGACAAAGATGTATTCTTCAGGAGATGAAATTCAGGACTATTTAGAAGAT
ACAGCTGATTATTACGGCATCCGAGAACACGTCAAATTCAGTTGCAAAGT
TGACACATGTGAATTCAACAAAGAGACACAAAAATGGTCAGTCAAAACTT
CAACAGGTCACGAATTCGAATGCAATTATCTCATCTCTGGAATGGGAGCT
TTACATGTCCCTAAATTTCCCAGTTTGAAAGGAATGGAAGAATTTCAAGG
AGAGCATTTTCACACTGCTCAATGGAAAGACGATTTTGATTGGTCCGGAA
AACGCGTAGGAATTATCGGTACTGGGAGCTCTTCAATTCAAGCCGTACCG
AAACTCGCCGAACGTTGTGAAGAGCTTTACGTCTTCCAAAGAACACCAGC
TTGGATTTTCCCTCTCTTGAATTTGCGTTATCCAGCTatcattcaaaaac
tttttcaagcTTTCCCATTTGTTATGAAGCTTCATCggttatattttttc
ttcagatCCGAATTTGTATTCGCCGCTTTCTTCGGGAAAGTATCGTTAGC
CCGAGAGATTATCTCTAATCTGACCAACCAACTCATGTCGAATGAAGTTG
CCGATCCCAAATTGGCTGAGAAACTTATTCCTAAGTACTCAATGTTTAGT
AAAAGAATCACCATCTCGAACGattatttgaaaacttttaatcgACCAAA
CGTTCATCTCATCACTGAACCGATTCAAGAAATTACCCATAATTCTATTC
TCCTTAAAAATAACCAAGATGCATCAGCGAAAGAAGTTGAATTAGATGCG
ATCATTTATGCAACAGGATTCGACGTTTTGCAAAGTTCGACAAATATGGA
TATCAAAAACCCAAATAACGGAAAGTCTTTATCAACAATTTGGGGAGAAA
CACCGAATGCTTACATGGGGATCATGCCAGCCGGGCTACCGAACTTTTTC
ATGCTCTTCGGACCCGGAACTGTGCTAGATGAATTTGTTCACGACTGCAA
TTCTTTTGGAGACTTTATTTACAATTATTTTTATTGGGGCCATCTTTGCA
TTTGGAGTTTGCTGCTACATTTTGTCGTATTTCATCTCATGGTTGTACAT
TGTTGGATTCCTCTCCCTTCTTTATTGGTTTTTGGTCACCGAGAGAACTC
CTTCACCACAAGAAATTCGAAAGCGTAAAGATACTTTTGTTGTCATCGTC
GGTGCTGGCTATTCCGGATTATGTGCGGCTATTCGGTTGAAAAAAGAACG
TATCCGCTTTGTTTTGATCGAGAAATCGGAAACACTTGGCGGAACATGGT
GGGATAACAAATATCCAGGGTGTGCTTGTGACATCCCCTCGCATTTTTAT
AGTTTATCCTTTAAACTGAACGCGTTTTGGACAAAGATGTATTCTTCAGG
AGATGAAATTCAGGACTATTTAGAAGATACAGCTGATTATTACGGCATCC
GAGAACACGTCAAATTCAGTTGCAAAGTTGACACATGTGAATTCAACAAA
GAGACACAAAAATGGTCAGTCAAAACTTCAACAGGTCACGAATTCGAATG
CAATTATCTCATCTCTGGAATGGGAGCTTTACATGTCCCTAAATTTCCCA
GTTTGAAAGGAATGGAAGAATTTCAAGGAGAGCATTTTCACACTGCTCAA
TGGAAAGACGATTTTGATTGGTCCGGAAAACGCGTAGGAATTATCGGTAC
TGGGAGCTCTTCAATTCAAGCCGTACCGAAACTCGCCGAACGTTGTGAAG
AGCTTTACGTCTTCCAAAGAACACCAGCTTGGATTTTCCCTCTCTTGAAT
TTGCGTTATCCAGCTatcattcaaaaactttttcaagcTTTCCCATTTGT
TATGAAGCTTCATCggttatattttttcttcagatCCGAATTTGTATTCG
CCGCTTTCTTCGGGAAAGTATCGTTAGCCCGAGAGATTATCTCTAATCTG
ACCAACCAACTCATGTCGAATGAAGTTGCCGATCCCAAATTGGCTGAGAA
ACTTATTCCTAAGTACTCAATGTTTAGTAAAAGAATCACCATCTCGAACG
attatttgaaaacttttaatcgACCAAACGTTCATCTCATCACTGAACCG
ATTCAAGAAATTACCCATAATTCTATTCTCCTTAAAAATAACCAAGATGC
ATCAGCGAAAGAAGTTGAATTAGATGCGATCATTTATGCAACAGGATTCG
ACGTTTTGCAAAGTTCGACAAATATGGATATCAAAAACCCAAATAACGGA
AAGTCTTTATCAACAATTTGGGGAGAAACACCGAATGCTTACATGGGGAT
CATGCCAGCCGGGCTACCGAACTTTTTCATGCTCTTCGGACCCGGAACTG
TGCTAGggCACAGCAGTGCGATCTTTATGACGGAATGTCAAATAGATTTT
ATGATGAAGACGATTACTCGATCCATTGATAACAATTGTTCTTCTGTCGA
GggCACAGCAGTGCGATCTTTATGACGGAATGTCAAATAGATTTTATGAT
GAAGACGATTACTCGATCCATTGATAACAATTGTTCTTCTGTCGAGGTGA
CACAAGAAATGAATGAGGGTTATCAATCTTACGTCACCGAAGGATTAAAG
AAAGTTGTTTACGGAACATCTCCTGAATGTAAAGGCTGGTATTACAACGA
GAGTGGAACGAATTATACTTTATGGCCAGCCAGTTGTTTGCATTATTGGT
GGAAAACCTCACAGGTCAACTTCGAAGATTTTAAGACCACCAAGGCTTGT
GACAAGGAGTGAGTGACACAAGAAATGAATGAGGGTTATCAATCTTACGT
CACCGAAGGATTAAAGAAAGTTGTTTACGGAACATCTCCTGAATGTAAAG
GCTGGTATTACAACGAGAGTGGAACGAATTATACTTTATGGCCAGCCAGT
TGTTTGCATTATTGGTGGAAAACCTCACAGGTCAACTTCGAAGATTTTAA
GACCACCAAGGCTTGTGACAAGGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000303_pilon | genome | sc0000303_pilon:289507..292813 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1474-1689:3092 |
| Aaloc | 1381-1473:1689 |
| Aaloc | 1-1377:1 |
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