XLOC_021453 (mRNA) -

Overview
NameXLOC_021453
Unique NameXLOC_021453
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000403_pilon:225379..232324-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021453 ID=XLOC_021453|Name=XLOC_021453|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6946bp|location=Sequence derived from alignment at sc0000403_pilon:225379..232324- (Clytia hemisphaerica_ch_hm2_pilon)
GGACTATCAATATCCATCTTTTCTTCACACCCACTTGTCAGCAAGACACG
TGTAAAAATGGCTTCAAATTCCAATGCTAACGACTTTACAGGTAAGCATG
TTTGAAATCCCTCGTGAGTTTTTCTCTTACAATCCAATTTGGATGACACA
TACAGGGTTATTTGCGATGTTAGCTTTAATAGGCTTATGCAAATATTAAA
CACATTTGAATATGAATGATAACTAACATTAACAAGAGCCACAAAGATGT
GGTTAAATATTTCCTCCAATAGCTCAGAGCATAGATTGTAGTCGCAGTCG
AACCCCACAGAATATCCTAAAGACCCAACTTAGTAACTTAGATTTATTAA
AGCCTTTATATTAAGCAATATCCGATGCAAAACAAAATACAACCATATTC
CTGCTAAAAATTGTCGTTATTTCATAGACATGTTCACAGATGATATAAGT
CTAAAAACTTGTTAAAAAATTGCATGCAAATGATAACCATTTTAACACAA
AAATAAATTTATTTTATTCAACTAATATTGGTTTTTACCTTCATTAAGGA
AATAAAATCTTAGATTTACAAGTTGATATTATTCTAAGACTCATCTGAGT
AAGAAAGTGCCAAAATATCTTGAGACTGTCTACTAAGTGACTAATATGGA
AATATAGCAATATGAATTTGGGAGATATCGAAATATGTTGTACACATTAG
TTTCATATGAAAAACTTCCTTGTCATCAATATTTTAAAGCACCATATTAT
ACCATTCACAAATAAAAAGTTACTTAAAAATGGATCTCCTTCTTTACAAA
TTTAGATTTCCAGTGCACAACATCTGTTACATTAGTATTCATGTGATAAT
ATACCAAATTGTCAACCTTGAAATTGTCACATTTAGTTACAGTATTGCTA
AATATTTTCAACACTTTCCAGCAAACTTTTTTGTGAAATTTGTGTCTTGA
TAAACTAAACTCCATGACATTTGTATCATTGATCATTAAATCACATCTTG
GAACAATAGAGTTCCTTGGTTCAATTATTGCAAGAATGTTAGTCTTTGTT
CATATTCTCATTATGTTACATTGTATTGTCAGCTTTAGAGGTCGTCAAAC
TTTGTTGAATTTGTAATCCTGGCACCTGAATGTGAAAGGAAAGAAAAATT
CAAAATTTCATAATGGGAAATAATCTCTTTACAGTAATCAATGCCAAATG
TGTGGTCATTCACTGAAATCTCCCAAGAAAAAAGACTTTAAAAAAGTGAG
ACTCTGCTTGATGGTTCGAGCTATGTTTGCCATGCATATATACTGAGCCA
TTAAAGAAGTTTACGGGAACGTACAAAAAGGACCACAGGGTACGTACAAT
AAAGTACACTGGGAACATACAATAAGGTTGACGGGAAACATACAATAAGG
TTCACAGGGAACGTACAATAAGGTACAAGGGGAACGTACAATAGACCTTT
TTTCAAAGAGGCCACCCTGTTGAATAATTATGTAGTCCAGCAGAAAAACA
ATGATAAAACCATGCATAATTATTACAATATGCATCATGATACAGTAATT
ATGCATAGCTCTATCATTGTTTTTATGGCTGGAGTACATAATTATTCAAC
AGGACGTCCTCTTTGAAAAAAGGTCTATAAGGTACAAGCGGAACGTACAA
TAAGGTACAAGGGGAACATACAATAAGGTACACGAGGAACGTACAATAAG
ATACACTGGGAACGTACAATAAGGTTCACGGGGAACATACAATAAGGTAC
ACTGGCAATGTACAATAAGGTACACTGGGAATGTACAATAAGGAACACTG
GGAACAATACATACAATAAGGTAGAGGGGAACGTACAATAAGGTATGGAT
TCCACGAAATCTCGCGCCGAAGATATTTTTCCGTGCAGCAAGCCTCACGC
CAAGCAAAATTTCTTTTGTACCAACATTCAATTTTTCAATAAGGGTGCAA
GATGGGAAAAGAGGCCCATGCGCCAACATAACTAATAAATTGACGCGAGC
GCAAGCGAGCGAAAGCAAATTTAGCCAAATGGAATAAGCTAAAAATCGAT
GGATTATGGAGTCATTCACGCCGAGCTGGAATTATTACTTTACGCCAACT
GAAAATCAAACAATCTTTGTAAGTACCCTTAGCGCCAAAAACGTTTCATT
TGTACGCCGAAGAACTTCGGCGTTAGTTACACGAAATCCATACTGGGCCA
CAAGGGGAACGTACAATAAGGTACACAGGGAACCTACAGGGAACGTACAA
TAAGGTATATACACGGGGAACATACAATAAGGTACTGGGGAACGTACAAT
AAGGTACATGGGGTACGTACAATAATGTATACGGGGAACTGCACAATAAG
ATACACTGGAACGTACAATAAGATACAAAGGGAGCGTACAAAAAGGTACC
CAGGAACACACAAAAAGGACCAACGGTGAGCGTACAAAAGGTACCCTGAA
AGCATTCAAAAAGGACCATGGGTAGTGTACAAAAAGGAAAACGTACCAAA
GGATCCCAGAGAGCGCACAAAAGATACAAGGGAGGGGAGCCTACAAAAAG
GTAAACAGGGAGTAAAAGCATCTATTATGATCTAGTTTTCTTTTTAGCAT
CTGGCATCAAGGCTAAAAATGGGGCACTGAGAAGAGTGCAAGCTTTTCCA
AGTTTTGAACATTAAAAAATATCTAGACAATATATACATGATGGAAATCA
GAAAGAAATTTATGCTCACCTTATTCTCAAGTCAAGATAGGAATGGATTG
GATTTCCATGTGTTTCAGCTTCTTTCTCCACCCTTCTTCTTCTCCTTATG
GGAAAAACAACAAATACAGCACACACGAGAGGCAGTCCTCTGAGCTTTAC
ACACAATCATTTGTTTTTATATGAAAAGCTGGTAAAAACCCCTGCAAAGG
ATACTATTTTTTTCCCCGCTAAATCTTCGCGACGTATTTTAGTCACGTGA
CTGAAGAGCCTAGTCATAATGTGCAGCACGAATAAAGAAAACATTAACAT
CGAAAATGGACGAAGAAGAAAAAGAAACGGAAAAAGGCCGTTTTAATAAA
TATTCCCCTATAGTAGGGAAATATTTAATAAAAATTTTTTTTTTTTGAAA
TATAGTACTAAATGCAAGAGTTCTTCTTCTTTCAAAATTAAAAACGTGTT
CACTTGACTACACTGCTTGATATAATTTTTAATTGCATTTCAGATATCCC
ATCAAGTCAATCTAAAACAAACAAACGAAAACAAAAGGCCAAAAAACAAA
GTGTAGAAGAAGATATTCCATCATCAAGTCAATCCAAACCACAACCGGAA
AACCAACTCAACAGGATATTCCTAATGCTGAAGGTATGTGTTGATTTTAG
CTTTACATAATTTCTCATTAACATTTTTTCTCGAAAGTTTTTTTTTACCA
TAATTGCAGAGGGGTGAATTGCTCACAAAAGGAGAATCAGATTTTGATTT
TCCTGTGATTTTTGGACCTACCTGGAGGCCCTATAAATTTACCTTTTTCT
GTATGTCTGTTCAGTTTTTTTCTCAAAATCTAGTCATAGAATCATCTTGA
TTTTTTGCAGAGTGATGCAAAACAGTAGTGATTCCCAAATAGTGACCGAG
CCTGATTTTTGATAAAAAAAATTTTCTGGCAGGAAATCCTTGAAATATGC
TGGAAATCACCATTGTCGCTAAATTTCATTGCCCCGCAGGGGCTTTTGTT
GCTTCACGTAGCGGACCTGCTCGCCAGAAAAATATTCATGTTCATGATTC
AGATTCATGTTCATGTTGTTTCTTCCGTTCTTCCGATTCTGAGCGGGCCG
CGCGCGGTTAAAAAATGTTCGCGCGCGATATCTCTTTTGCTGCTACTTGT
ATTGATTTCCTAGCGATGCACGGACAGAGAAGGTAGCTTCCCGTCTGCAC
TGCCTCCAGTCCACACAGCTAAACAGCTAAAAGCTTTCACAAACAACAAA
CAGCACACAAGATTTTATTTTTGCTTGGTTAATATCTTTTTAACGTAGTT
GCTCAACTGGATTTGCTTGAGGGACATTGTTTGCTACTGAATGAATAACT
ATCAAACTACTGATATTAGATCAAACCTTATACAATTGTCAGAATGGACG
ATGGACATCTTCAATGACAGTTTGTTACACACACACACAGACAGAGTGTT
ATGCGCTGCTCTAACGAAACCCTGCTGATATTATAAAGGCATAGACAAAA
GGGAAATTGACCGTTAATTCATATTGTTTACCTATATAGTGATTTCATTT
TGAAGGAAATTAAATTGAAATTTTTGGTGGCGTGGAAAGACAAAACCCAG
AGTACCCTATAATTATATGGATATTGCATGCCCCGAAAGTAATTTTTCAA
AGAGTAAGCATTGCGCCAAAACGTGCCAAAAACTGGTACCAACATCGAGT
TTCTTACAAAAGGTTTAGTGAGTGAGACATGCCAATGAAAATATACTATG
ACTAACATGAACTGATTCATTCTCGTGGACATTTGAAGCACAGTGTTACA
GCAAAAAAGATGGTTGTGCATGGGAAGCAGCGAGCAGAAAAATGTAAACA
GAAGCGGAAAAAAAGCCGAAAACAATGGATTATGAAGTATTTGATGCTAT
TTTGTGAATAATTCTTTACGCCAATATTGAAGCTTAAAAAGCAAACTTTG
AAAATGCTGTTTATGTCACTGTGTCAGAACGGTACTTCGATATGTAATGT
ACGCCGAAGATTTTCAGCCTCATATTATGAACAGACTCGAACACTCTCTC
TACTAATACCCCCACGGCACATTGTACCGTATTGATGTTGAACGCAGGAG
TATACTTTGCTCAAATCAAATCTGAACAAACTTTTTGACTTTTTAGAACC
AGACGTCCAATAAAATACAAACACAAATGTTGTACCTACATGTGAAGTGA
AAAGTTTTTAACCATGTTGACGGTGGTTGCAACAGGACACGGTATCTGAA
AATTCCCCTGGCAATTTTGAGAGCAACTATCAAATTCATATCTTTAGTAA
CCATGAAGAAATTTTATTCAAACTGAAAACTTTTTGCAGAAACACGTATA
AAGATTGTTAAAGTTTTTCAGATAATTGTCAGTAACCTTTGATACAAATA
AATTATATCTACAGTATGCCACCAGTCCAAAGTTACTTACTTTTTAAATT
TCAAATCAAATGACTGAAATTATATTCAATTTCATTTTCAAATTCACCTT
TTAATCTGCATTATGTATATTCTTTATGAAAGGGAAGCACTTTCAGTTTC
ACAGTACACATTCTTATGTTTGGGTTTTTCAAAAGGGATTTTTATTAGAT
TTTTATCTTGTGATTGAAGAAAATCAACTTTGATATCATTCTAGTTCTTA
ATATGTTGCGAAACCTGTAATGGTTTTAATTTAAGTCACTTTGCATCAGA
AAGGGTAGATTAAACATGTTTATTTTGGATTGACACTTTCGTTATGTATG
GATCTTACTGAGAAAATTTTAACCGCATCGGCTCACGTGCTTCTTAACTT
TAAACAGCTCTAGTAACATTGAGCACTTTTTATGAAGACTCATTTCACCA
ATTTATAGTCTGATTATGATTCCCTTGCTCTCTTCATGACTAAGTTCCTC
TGGGCTAATATCTGCTATCGGCGGGGCATTCATAGCGACAGCTAATTGCT
AGTTATACTTTTTTCCTAATATTGGGCTATTCCATATTTAAACCGTTCAG
GGGTATTGATGAACTTTTCTAGGGGGGTCTGAGCCTTGATTTTCCAGGGG
GCTTTTGGTCAAAGGTTTCCAGAGAGTTCTCTTCTCCTAAACTGGCATCA
ATAGTCACTTTAGACCCTTTTTCATAAAATTTCACATTCCAGGGGTGTCG
ACTCCTAATTTCCAGGGATAGTTTGTTATCCAAAATTTCCAGGGGGCTAG
TGAAAAAAGTTTGTCAATACCCCTGTACAATTTCTTTTTGTTTCTTTAAC
ACAAAAACATTGTTAATAGCAATGCCCACCATCAAGCATGAATTAACTGT
TAAAAAACAGTTTTGAAGCCGGAACTTTCTAAAAACTGCTGGACAACTGA
GAATTGCTGGAAAAACAGTTTTTCTTATAATCCGTTTGTTACTTAATTCT
TTATAATTTGACAATGTACTGTAATTCTATTTATAACATCTTTTCTGGAG
AAAGGTTTTGATACTTTAACTCCTTTGAATTAGCAAATATAAATAAAGAA
GGAAATTGAACATCTTTCTACAACCCCTCTGAAAATTTAACCCCCTGTAA
AAGTTGGTAAAATATGTGATTTTTAGATTTGCACGGAAACAGAAGCAACA
GAAGTACTCCTCCTCCTGACAATGACCAACAGCAGGAGGATCAAGGTTAT
TCTTTTTCTCAACTACAAAAATACACTTTTACATATCTAAGAACCAGTGA
AATTTAGTTTGGCTTTACCTACCTCTACATTTGTACCCTACAAATGATAT
AAGAACATTTTTAGGTTTTCTGAGCTCCATAACATAATTTTTTAGGAAAT
AACCCAAAAATAAACCAAAATCGGAAAACAATTGAGCTTTAAACAGCAGG
GAATCTCAATACAGAATAAGGTACACAAAGGGTTCTACATTGGTTTAATT
ATGACGTGTTAAAATTTAACAAATCACAAGTTTCTAGATCTCGTTAATAA
ATATTAAAAAAGTTTCTCCTATGTTCAGCAAGAAATAATTAACTAGTCTG
TGATTTAGCTACTAAATCAATGTTTTTTGTTATCAGATTTGTATTTCGTA
CACAACGTCAGTGGGATCAAGACATATGGCAACAACAACAAGGAATACTT
TCACTGTGTTTTGCAATCTCCCACCGCCACCAGGAAAGCTGTTTGCTATA
CACCGAAAAAGCACAAACTACTACACGATGTTTCAGAATCCAGATCGCCA
GTTAAGATTACCAAGATGGGCTCAGATATCAACAGCAATGATATGA

Coding sequence (CDS) from alignment at sc0000403_pilon:225379..232324-

>XLOC_021453 ID=XLOC_021453|Name=XLOC_021453|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1020bp|location=Sequence derived from alignment at sc0000403_pilon:225379..232324- (Clytia hemisphaerica_ch_hm2_pilon)
GGACTATCAATATCCATCTTTTCTTCACACCCACTTGTCAGCAAGACACG
TGTAAAAATGGCTTCAAATTCCAATGCTAACGACTTTACAGGGACTATCA
ATATCCATCTTTTCTTCACACCCACTTGTCAGCAAGACACGTGTAAAAAT
GGCTTCAAATTCCAATGCTAACGACTTTACAGATATCCCATCAAGTCAAT
CTAAAACAAACAAACGAAAACAAAAGGCCAAAAAACAAAGTGTAGAAGAA
GATATTCCATCATCAAGTCAATCCAAACCACAACCGGAAAACCAACTCAA
CAGGATATTCCTAATGCTGAAGATATCCCATCAAGTCAATCTAAAACAAA
CAAACGAAAACAAAAGGCCAAAAAACAAAGTGTAGAAGAAGATATTCCAT
CATCAAGTCAATCCAAACCACAACCGGAAAACCAACTCAACAGGATATTC
CTAATGCTGAAGATTTGCACGGAAACAGAAGCAACAGAAGTACTCCTCCT
CCTGACAATGACCAACAGCAGGAGGATCAAGATTTGCACGGAAACAGAAG
CAACAGAAGTACTCCTCCTCCTGACAATGACCAACAGCAGGAGGATCAAG
ATTTGTATTTCGTACACAACGTCAGTGGGATCAAGACATATGGCAACAAC
AACAAGGAATACTTTCACTGTGTTTTGCAATCTCCCACCGCCACCAGGAA
AGCTGTTTGCTATACACCGAAAAAGCACAAACTACTACACGATGTTTCAG
AATCCAGATCGCCAGTTAAGATTACCAAGATGGGCTCAGATATCAACAGC
AATGATATGAATTTGTATTTCGTACACAACGTCAGTGGGATCAAGACATA
TGGCAACAACAACAAGGAATACTTTCACTGTGTTTTGCAATCTCCCACCG
CCACCAGGAAAGCTGTTTGCTATACACCGAAAAAGCACAAACTACTACAC
GATGTTTCAGAATCCAGATCGCCAGTTAAGATTACCAAGATGGGCTCAGA
TATCAACAGCAATGATATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_021453XLOC_021453-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000403_pilongenomesc0000403_pilon:225379..232324 -
Properties
Property NameValue
Aaloc301-510:211
Aaloc232-300:671
Aaloc94-231:3752
Aaloc1-90:6947