XLOC_021422.2 (mRNA) -

Overview
NameXLOC_021422.2
Unique NameXLOC_021422.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000493_pilon:78239..79584+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021422.2 ID=XLOC_021422.2|Name=XLOC_021422.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1346bp|location=Sequence derived from alignment at sc0000493_pilon:78239..79584+ (Clytia hemisphaerica_ch_hm2_pilon)
CCGTTGGATGCGACGGTGCATAATTATACAGTACCTGCTGTCAAAGGTTT CTTCCATTCCATTTCCTTGTCACGTGGTAATTCGCTCCAAGACACTCTGA GGTCAGTTCACTGTTTGGAATTATTTCATCATAACAACAGGAATTCTTTA GGACCTAATAATTGATACTATTTGTTGACGattcaaaattgacaaaaatt gtaaatatataGCGTAATGTTAATGGTTTCCCACTTCGCCGTAATGAGTC AAACTTAGTCTTTGTACCACGAACTTTTGGAAGTACCAAGAATTCTCTAG GACTTAATAATTAATACTACTTGTTAACgattcaaaaatattgacagaga TTGGAAACTTAATATAGCGTAATGGTTTCCCATTTCGCCGTCATGAGTCA AACTTAGTCTTTGTACCACGAACTTTTGGAAGTACCATTGGCATTAGAAG TAAgtcattaatttttaaagtaATCTCATTAATAGCCTAAACTACCTTTT TCTGTTCGTCCTATAGATTGTTGACGTTGTGGTTCGATTTTGGACATTAC GATGACGTGCACAAAGCACTTGTGGATGGATTAAAAACCATTCATATTGA TAACTGGCTTCAGGTATGTTTTAGTGTAATTGAGCTTTAAGCGGTTTGAT TTCATTGTCTTTCAAAATTCACCTAGTGGTTTATATGTTAAATGCTCCTC TCCATCGGGATGGAGGCTTATCCCCAATCTAACTCGGATACGAATTTATt acttgaaagtttttcatcacTCGAACACCTTTTATTTAATAAAACTTGAT AAAGACGGGTCAAAACGTCGTATTACACAACTGTGTTTTACTGGTCTACT ATGCGTATAGattgactttatttttatttaatttgaacgCAGGTGATCCC GCAGTTGATAGCGCGTATCGATACACCACGACAAATGGTTGGTCGACTGA TCCATCAACTCTTATCCGACGTCGGAAAGCAACATCCTCAGGTGACAGAA TCTCACAATCTTTAGTTTCGTTGTTTCTTTTAGTTCAATAACTTATACTT TTATACTTCATATTTTTAACTTATATTTGTTTTCACATTACATTCATTTA CAGGCTTTGATCTACCCGTTAACCGTCGCTTCGAAGTCAGCCAGTGCTGA TCGCCGAAACGCTGCCGAACAAATCCTCTGTAATCTACGTGAGCACAGTC TAGCGTTGGTGGAACAGGCTATGATGGTAAGCGAAGAGTTGATCCGAGTT GCTATTCTGTGGCATGAATTATGGGCTGAAGGACTGGAAGAAGCATCTCG GTTATATTTTGGTGAACGTAACGTGAAAGGAATGTTTGCCGTGTTG

Coding sequence (CDS) from alignment at sc0000493_pilon:78239..79584+

>XLOC_021422.2 ID=XLOC_021422.2|Name=XLOC_021422.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1080bp|location=Sequence derived from alignment at sc0000493_pilon:78239..79584+ (Clytia hemisphaerica_ch_hm2_pilon)
CCGTTGGATGCGACGGTGCATAATTATACAGTACCTGCTGTCAAAGGTTT
CTTCCATTCCATTTCCTTGTCACGTGGTAATTCGCTCCAAGACACTCTGA
GCCGTTGGATGCGACGGTGCATAATTATACAGTACCTGCTGTCAAAGGTT
TCTTCCATTCCATTTCCTTGTCACGTGGTAATTCGCTCCAAGACACTCTG
AGATTGTTGACGTTGTGGTTCGATTTTGGACATTACGATGACGTGCACAA
AGCACTTGTGGATGGATTAAAAACCATTCATATTGATAACTGGCTTCAGA
TTGTTGACGTTGTGGTTCGATTTTGGACATTACGATGACGTGCACAAAGC
ACTTGTGGATGGATTAAAAACCATTCATATTGATAACTGGCTTCAGGTGA
TCCCGCAGTTGATAGCGCGTATCGATACACCACGACAAATGGTTGGTCGA
CTGATCCATCAACTCTTATCCGACGTCGGAAAGCAACATCCTCAGGTGAT
CCCGCAGTTGATAGCGCGTATCGATACACCACGACAAATGGTTGGTCGAC
TGATCCATCAACTCTTATCCGACGTCGGAAAGCAACATCCTCAGGCTTTG
ATCTACCCGTTAACCGTCGCTTCGAAGTCAGCCAGTGCTGATCGCCGAAA
CGCTGCCGAACAAATCCTCTGTAATCTACGTGAGCACAGTCTAGCGTTGG
TGGAACAGGCTATGATGGTAAGCGAAGAGTTGATCCGAGTTGCTATTCTG
TGGCATGAATTATGGGCTGAAGGACTGGAAGAAGCATCTCGGTTATATTT
TGGTGAACGTAACGTGAAAGGAATGTTTGCCGTGTTGGCTTTGATCTACC
CGTTAACCGTCGCTTCGAAGTCAGCCAGTGCTGATCGCCGAAACGCTGCC
GAACAAATCCTCTGTAATCTACGTGAGCACAGTCTAGCGTTGGTGGAACA
GGCTATGATGGTAAGCGAAGAGTTGATCCGAGTTGCTATTCTGTGGCATG
AATTATGGGCTGAAGGACTGGAAGAAGCATCTCGGTTATATTTTGGTGAA
CGTAACGTGAAAGGAATGTTTGCCGTGTTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_021422.2XLOC_021422.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000493_pilongenomesc0000493_pilon:78239..79584 +
Properties
Property NameValue
Aaloc298-540:1104
Aaloc199-297:893
Aaloc103-198:518
Aaloc1-99:1