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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000257_pilon:125620..127919- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021392 ID=XLOC_021392|Name=XLOC_021392|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2300bp|location=Sequence derived from alignment at sc0000257_pilon:125620..127919- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTCGTATTCGAAATCCAGAATGGAAGGAAGATCAATTACTTAAAGG
AAAGCTTGAAGAGTGTGTGTTGCAAAAGTATTCACGCAAAGAAATCCTTG
TCATTGTCAAAAAACAATTTAGTCAATATGGTTGGAGCTTGAGATCTCTA
ACAGATCGTTTGAAACACTTCGATATACGCTATATAGATTATGAGGTTTC
TTTGGCTAGTGTTTACCGTGCTGTGCAGGAGGAGCTGGATGGACCTGGTA
GCCAGCTTGGATATAGAGCAATCACCCAAAAAGTCAGAGAAGTACACAAG
CTTAAGGTGCCCAGAGATGTGGTTTATAATGTAATGAGAGACTTGGATCC
TGATGGTCTAGCATCACGGGGAGATGTTGGAGTGTCAAAGAAGAAAAAAA
GAGAAAAGCGGTTTGCTTCTCAGGTGATCATGTACTAAGATTAAAGATTT
CATATTGTGATTACTATACAAGAATTCTACCAGAATTTGATTCTTTTCGT
CTTTATTTTTCATCTTCATTTTTAAAACTTTTTTTACAAAGTTTTGGTAT
AATATTCCACTGACAGTTGCCTTTTCAGCAAGCACAAAATCAATAAAGTT
CAAATTTGAAGTGCAACTTTTCTTGCTTCCACTTCCAATTATTTTGAGAT
GGATAGTTCAGTTAGCCAGGGTCAGTACCCTGCGGCTGTTTCGTCTGGAT
CAATCCAAGTCAAAATATATAATGAAATTTGTGTTTTTCATTGTTTTTAT
CGAATTCATTTTGAGCTATCTATATATCAAGTATTTCAGATTTTTAGGTG
TTTATTGATTTCCAGGTTACATTCAAACCCTTGTATTACTAGGGCCCCAA
CTCAACAATGTCACTGGATGGACATGACAAGCTTTGTGGATTCCAGAAAG
CTACATTTCCTCTTTGTATTTATGGTGGTCAAGACTGTTACAGTGGGAAG
ATTCATTTTCTAAAGATCTGGACAACCAACAACCACCCTAATGTCATTGG
AAAATTCTACTATGATCATCTTTATGAAAATCTTGGTAAGTTTATTTTTG
AAAATATCGAAAAATTGGCTTTCACAAATCATTGTCCTCTCGGGTACCTA
GTAAGTGGCCAGCCGCTAATTGATTTTTTGAAAATTTTCCACCCAGGACA
TTCTTTAAACCCCTGCACTTATTAACTTTTGAGATATTTTTCCACTCACC
CCACTTACGCTTATCCCAACCCCCTGTCTTTCATGTCCCGAGGGTAGAAG
GAAAGTGCTGTTTACATGAACACAGGCCAAGTACAGTAAGCACAAAGATA
AGAGAACCTACACTTGAAAACACAATTTTCTGGAGTTTGTTTTTATAAAA
TGAAATTGAGACATAATATCAAATAATTCATCGAGTTTTGCAGATATTAT
TCTCAACTCTAGTTGAGCTAGAATCTGACAATGTCTGTGTGTCACAAGGG
TAGCCTGGAGACAAAAATGGTCGATTTAACTGAAATTTTAATCACTTCTC
CATTGGGAGATTTTTTTCGAAAAATTCAATATTTTAAGCCTGCAATGAGT
TTTTTACAACTGCTACAATTGGGCCTCCGAATAGTTTGACAGATACTGAA
GTTGAGGCCAGTGCGTTGCGCACGTTCGACTATTAAATAATTCAGTACGT
TTCAAGTAAGGTGAATTCACCTAATTTTTTCCTGAAACTTAAGTTCATTC
CATTTAAGTTGTCTTTTTTGCCAACATATGGAAACCATATCAGCGTAATT
AAGACTAATTCCCTTGAGGGTGGTTTTCATATGGTAGCAAAAAATACTGC
CAAATTTAATGGAATAGACTTAGACTTTAAACATGAGAAGGAGGGAAAAT
TAAAATGGTGTGACACATGGCAGTTTTATAATCTAAATGCAATGCAATCG
CATTTATGAATCTTTTCCTTCGGTTATTTTTCTAAAAATGTACTTGTATC
CAGCATATTCTTTCAAAAAAAAATTAGGTAAGTATGGTAAGTATGTTAGA
ACTAATAAGGTTATGCTTTCCCTTTCAGTTTTACCGACAACGGTGCGAAT
AGACAGAGGATCAGAAACTGATTTGCTTACGACCATACATTGTCTTCTCC
ACAGAAAGAAGGAAACTTTTGAAACAGAAAGGAAATTGATGGGTGTTGGT
GTTCAATACGGGCCATCAACTGCTAACAAGATTGAACGCTGGTGGCGGGA
ACTCCATCATCGCATGGAAAAGTACTTCAAAGAACAGTTGCGCTCGTTAT
TGGATAATGGTGACTATGATCGAACTTCAATCAGTGACAGGTTACTTTAA
Coding sequence (CDS) from alignment at sc0000257_pilon:125620..127919- >XLOC_021392 ID=XLOC_021392|Name=XLOC_021392|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1776bp|location=Sequence derived from alignment at sc0000257_pilon:125620..127919- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTCGTATTCGAAATCCAGAATGGAAGGAAGATCAATTACTTAAAGG
AAAGCTTGAAGAGTGTGTGTTGCAAAAGTATTCACGCAAAGAAATCCTTG
TCATTGTCAAAAAACAATTTAGTCAATATGGTTGGAGCTTGAGATCTCTA
ACAGATCGTTTGAAACACTTCGATATACGCTATATAGATTATGAGGTTTC
TTTGGCTAGTGTTTACCGTGCTGTGCAGGAGGAGCTGGATGGACCTGGTA
GCCAGCTTGGATATAGAGCAATCACCCAAAAAGTCAGAGAAGTACACAAG
CTTAAGGTGCCCAGAGATGTGGTTTATAATGTAATGAGAGACTTGGATCC
TGATGGTCTAGCATCACGGGGAGATGTTGGAGTGTCAAAGAAGAAAAAAA
GAGAAAAGCGGTTTGCTTCTCAGATGAGTCGTATTCGAAATCCAGAATGG
AAGGAAGATCAATTACTTAAAGGAAAGCTTGAAGAGTGTGTGTTGCAAAA
GTATTCACGCAAAGAAATCCTTGTCATTGTCAAAAAACAATTTAGTCAAT
ATGGTTGGAGCTTGAGATCTCTAACAGATCGTTTGAAACACTTCGATATA
CGCTATATAGATTATGAGGTTTCTTTGGCTAGTGTTTACCGTGCTGTGCA
GGAGGAGCTGGATGGACCTGGTAGCCAGCTTGGATATAGAGCAATCACCC
AAAAAGTCAGAGAAGTACACAAGCTTAAGGTGCCCAGAGATGTGGTTTAT
AATGTAATGAGAGACTTGGATCCTGATGGTCTAGCATCACGGGGAGATGT
TGGAGTGTCAAAGAAGAAAAAAAGAGAAAAGCGGTTTGCTTCTCAGGGCC
CCAACTCAACAATGTCACTGGATGGACATGACAAGCTTTGTGGATTCCAG
AAAGCTACATTTCCTCTTTGTATTTATGGTGGTCAAGACTGTTACAGTGG
GAAGATTCATTTTCTAAAGATCTGGACAACCAACAACCACCCTAATGTCA
TTGGAAAATTCTACTATGATCATCTTTATGAAAATCTTGGGCCCCAACTC
AACAATGTCACTGGATGGACATGACAAGCTTTGTGGATTCCAGAAAGCTA
CATTTCCTCTTTGTATTTATGGTGGTCAAGACTGTTACAGTGGGAAGATT
CATTTTCTAAAGATCTGGACAACCAACAACCACCCTAATGTCATTGGAAA
ATTCTACTATGATCATCTTTATGAAAATCTTGTTTTACCGACAACGGTGC
GAATAGACAGAGGATCAGAAACTGATTTGCTTACGACCATACATTGTCTT
CTCCACAGAAAGAAGGAAACTTTTGAAACAGAAAGGAAATTGATGGGTGT
TGGTGTTCAATACGGGCCATCAACTGCTAACAAGATTGAACGCTGGTGGC
GGGAACTCCATCATCGCATGGAAAAGTACTTCAAAGAACAGTTGCGCTCG
TTATTGGATAATGGTGACTATGATCGAACTTCAATCAGTGACAGGTTACT
TTAATTTTACCGACAACGGTGCGAATAGACAGAGGATCAGAAACTGATTT
GCTTACGACCATACATTGTCTTCTCCACAGAAAGAAGGAAACTTTTGAAA
CAGAAAGGAAATTGATGGGTGTTGGTGTTCAATACGGGCCATCAACTGCT
AACAAGATTGAACGCTGGTGGCGGGAACTCCATCATCGCATGGAAAAGTA
CTTCAAAGAACAGTTGCGCTCGTTATTGGATAATGGTGACTATGATCGAA
CTTCAATCAGTGACAGGTTACTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000257_pilon | genome | sc0000257_pilon:125620..127919 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 619-888:271 |
| Aaloc | 424-615:1459 |
| Aaloc | 1-423:2301 |
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