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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000234_pilon:474404..476824- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021315 ID=XLOC_021315|Name=XLOC_021315|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2421bp|location=Sequence derived from alignment at sc0000234_pilon:474404..476824- (Clytia hemisphaerica_ch_hm2_pilon)
GAGTGCTTCAGAAATTTGAAAATGATGAATGAAGAAGAAGAATTTGAAAA
TATTATAGACTTTGATGACGATCCTGACTTTGATGAAGAAGAACTCTTTA
CTCTAGAATGCCACCCTGATCCTCACGATGAGACAACAGAAGTTGTGGTC
CCAGATGATGTTAGGGAAATGTTAAATGAGGGAGTTGATGATGATGCTGA
AAATGTCTTTGTTCTGGATGAGATCCCTACAGTGACTTTTGTCAGTGATG
AAACTGTCAACATCATTCCATCATCTTCAAAATCTGCAGCTGAAAAGCCG
ATCCTGATTTGCGAAAATTGCAGCAAGAAATATAAAATGAAATTTCACTA
CAATAAACATATTTTAATATGCAAGCCCAAGTCAGCCAACGTATCAGGTA
AGTTTTTCTCAAACATTCACAATTTGATACATCATTAGGGGTCCTCAGAT
ATTTTTATCTAATAATTCATTCATCATTGCCTGTCCAAAATCTTTCAAAA
CCAAATAGCAATAGCCCAATACACGATATGATATCATCATTTATTACTTC
ATAATATATTACATCATTTTAGTACAAAATAAGCCTTCAGTTTGTCCACT
AACAGACTAACACTGTCAATCCAGCCATCTTTTACACTAGTCATAAAACA
TTAATATTCCTTTTTTGTCAGGTTTTTTTTTTGATTTATATATGACTTTA
AATCTTAGATCAATCCTAGAAATTATTTTCAGCTTCTAGATATAAGGATA
TAAAACAGATTAGAACACCCTTTCAGCCAGAAAAATGTTGTATATATGCC
TTGTGTGATAGATGAGTAGATGGATAGTCGTTTATGGAGATCCCACTACC
ATTTCGATTGATGTTTTGACATTTGTTCACTTCAGAGAAATGCCCTTGTA
ACCATATTAAAAATCATCTTCTTTTTTCACATTCATAGATAAATCGACAA
CCAAGCGCAAACCAAAACAGCCTCCTGCAAACTCAACTAAAAAGGCAGCC
AAAACGATAACCTTTCCAGGTTTGTATATTCAAAATATTATGTATATTTA
TTCTACTTGCCTTGCATTTGATGCTTATAGGTTAACCTGTAACCTTTTAC
AAATCCCCATTTAGCTCGAGATGAGTGTTACAAGGAAGAGTTTGTAAAAT
TTGTGTTTATAGATCAAAATACAAATACATAGAAAACTATAGATTTCTCA
CCCCTTTGACAATAATTTAAACTTTTTCGATTAATAACTTCCATGGCAGA
TTTAATCTGTAAAAATTTTTATTCTTTCATTTCAGCTGTATTTAAAGCTC
ACGAAAAGAAGGATTATGTAAAGGATTCAACTGCACGTTTCCTTGGGTGT
CTTAAAAGTTGTGCTGATGACCCATTCTTCAATTTAAAGTCTGCTTGCGA
AACCCCTGGAAATATGACTGTAAAACTTGCTAAATCACTCCTGGAAAATG
ATGAAAGTTGCTTTGACGAAATAGCTAAGCAATTTAGCGAATGGCTGTTA
CCAGCATTGAATCTCCCTGGTACGTCGGACGCAAGAGAGCATTGCTGCAA
ATTGTTTATCCAGGAAATGATTTCTTCTGAATCGAATCACCAGATTTGGA
AAACTTTTTTGACAAAAATTGGCATTAATTTGGTTGTGCACAAAAGACCA
GTCAACATGCTTTTTTCCTTTGTTGCCACAAAGTTTTTTGAAGAAAGTTT
GATTTGGAAGAATGCTGTTCTCATAAAGACAGGTATGAGAGTGGATTACA
CCAAACTGAAAATGTCAGAACATGAAGAGAAAATTTTACGGTATGTCGCC
GGTTACATTCCCTACTCCCTTAAACGTCAATATTGGTCTCGGCGCCATGA
AAGTACTGGTCTGATGATAACAGAGTTGGTATCATCCTGGATGGTGAATG
AAGATCAAGAGCTGACCGAGCACAAGCCATTTTATGAATATACACTTTCA
TGGACAAACCGTATCAATCGTGGTGGGTTGATGATTGTCAATGAAGTTTT
TTTTGTATTTGTAAAACGAATGGAAATGGTTGTGCGTGATGTGCTTAACA
AAACATTGATAAGAAATTATAAAGGTGAAGACCTTAGAGATTTGATTATG
ACTAAAATGTTAAAAAATGAGTTGCTTGATAGGAGTTGGAGGGGTATTAC
CAGGATCGTACACAATAAGGAGCTGGTTGATGTCATCAAGAAAGTTATTT
TCCGTAAATGGATGACTATGCGCATTAAATCCTTTGTTAATGCTTGGATT
CAAAGCATCAAATGGAAAGCAAGCAAAGAAAAGCAAGCCAAGAAAGCTGC
TAAAAACAATAAAGACAACGACAAAGAAGACAAAAGTAAAACTAAAGCTA
AGACAAACATTGATAAAGTTTCAAGACAAGCAGAGCCAGGGCTCAGAAAA
GCACTGTATAGCTCAAAGTAA Coding sequence (CDS) from alignment at sc0000234_pilon:474404..476824- >XLOC_021315 ID=XLOC_021315|Name=XLOC_021315|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3228bp|location=Sequence derived from alignment at sc0000234_pilon:474404..476824- (Clytia hemisphaerica_ch_hm2_pilon)
GAGTGCTTCAGAAATTTGAAAATGATGAATGAAGAAGAAGAATTTGAAAA
TATTATAGACTTTGATGACGATCCTGACTTTGATGAAGAAGAACTCTTTA
CTCTAGAATGCCACCCTGATCCTCACGATGAGACAACAGAAGTTGTGGTC
CCAGATGATGTTAGGGAAATGTTAAATGAGGGAGTTGATGATGATGCTGA
AAATGTCTTTGTTCTGGATGAGATCCCTACAGTGACTTTTGTCAGTGATG
AAACTGTCAACATCATTCCATCATCTTCAAAATCTGCAGCTGAAAAGCCG
ATCCTGATTTGCGAAAATTGCAGCAAGAAATATAAAATGAAATTTCACTA
CAATAAACATATTTTAATATGCAAGCCCAAGTCAGCCAACGTATCAGGAG
TGCTTCAGAAATTTGAAAATGATGAATGAAGAAGAAGAATTTGAAAATAT
TATAGACTTTGATGACGATCCTGACTTTGATGAAGAAGAACTCTTTACTC
TAGAATGCCACCCTGATCCTCACGATGAGACAACAGAAGTTGTGGTCCCA
GATGATGTTAGGGAAATGTTAAATGAGGGAGTTGATGATGATGCTGAAAA
TGTCTTTGTTCTGGATGAGATCCCTACAGTGACTTTTGTCAGTGATGAAA
CTGTCAACATCATTCCATCATCTTCAAAATCTGCAGCTGAAAAGCCGATC
CTGATTTGCGAAAATTGCAGCAAGAAATATAAAATGAAATTTCACTACAA
TAAACATATTTTAATATGCAAGCCCAAGTCAGCCAACGTATCAGATAAAT
CGACAACCAAGCGCAAACCAAAACAGCCTCCTGCAAACTCAACTAAAAAG
GCAGCCAAAACGATAACCTTTCCAGATAAATCGACAACCAAGCGCAAACC
AAAACAGCCTCCTGCAAACTCAACTAAAAAGGCAGCCAAAACGATAACCT
TTCCAGCTGTATTTAAAGCTCACGAAAAGAAGGATTATGTAAAGGATTCA
ACTGCACGTTTCCTTGGGTGTCTTAAAAGTTGTGCTGATGACCCATTCTT
CAATTTAAAGTCTGCTTGCGAAACCCCTGGAAATATGACTGTAAAACTTG
CTAAATCACTCCTGGAAAATGATGAAAGTTGCTTTGACGAAATAGCTAAG
CAATTTAGCGAATGGCTGTTACCAGCATTGAATCTCCCTGGTACGTCGGA
CGCAAGAGAGCATTGCTGCAAATTGTTTATCCAGGAAATGATTTCTTCTG
AATCGAATCACCAGATTTGGAAAACTTTTTTGACAAAAATTGGCATTAAT
TTGGTTGTGCACAAAAGACCAGTCAACATGCTTTTTTCCTTTGTTGCCAC
AAAGTTTTTTGAAGAAAGTTTGATTTGGAAGAATGCTGTTCTCATAAAGA
CAGGTATGAGAGTGGATTACACCAAACTGAAAATGTCAGAACATGAAGAG
AAAATTTTACGGTATGTCGCCGGTTACATTCCCTACTCCCTTAAACGTCA
ATATTGGTCTCGGCGCCATGAAAGTACTGGTCTGATGATAACAGAGTTGG
TATCATCCTGGATGGTGAATGAAGATCAAGAGCTGACCGAGCACAAGCCA
TTTTATGAATATACACTTTCATGGACAAACCGTATCAATCGTGGTGGGTT
GATGATTGTCAATGAAGTTTTTTTTGTATTTGTAAAACGAATGGAAATGG
TTGTGCGTGATGTGCTTAACAAAACATTGATAAGAAATTATAAAGGTGAA
GACCTTAGAGATTTGATTATGACTAAAATGTTAAAAAATGAGTTGCTTGA
TAGGAGTTGGAGGGGTATTACCAGGATCGTACACAATAAGGAGCTGGTTG
ATGTCATCAAGAAAGTTATTTTCCGTAAATGGATGACTATGCGCATTAAA
TCCTTTGTTAATGCTTGGATTCAAAGCATCAAATGGAAAGCAAGCAAAGA
AAAGCAAGCCAAGAAAGCTGCTAAAAACAATAAAGACAACGACAAAGAAG
ACAAAAGTAAAACTAAAGCTAAGACAAACATTGATAAAGTTTCAAGACAA
GCAGAGCCAGGGCTCAGAAAAGCACTGTATAGCTCAAAGTAACTGTATTT
AAAGCTCACGAAAAGAAGGATTATGTAAAGGATTCAACTGCACGTTTCCT
TGGGTGTCTTAAAAGTTGTGCTGATGACCCATTCTTCAATTTAAAGTCTG
CTTGCGAAACCCCTGGAAATATGACTGTAAAACTTGCTAAATCACTCCTG
GAAAATGATGAAAGTTGCTTTGACGAAATAGCTAAGCAATTTAGCGAATG
GCTGTTACCAGCATTGAATCTCCCTGGTACGTCGGACGCAAGAGAGCATT
GCTGCAAATTGTTTATCCAGGAAATGATTTCTTCTGAATCGAATCACCAG
ATTTGGAAAACTTTTTTGACAAAAATTGGCATTAATTTGGTTGTGCACAA
AAGACCAGTCAACATGCTTTTTTCCTTTGTTGCCACAAAGTTTTTTGAAG
AAAGTTTGATTTGGAAGAATGCTGTTCTCATAAAGACAGGTATGAGAGTG
GATTACACCAAACTGAAAATGTCAGAACATGAAGAGAAAATTTTACGGTA
TGTCGCCGGTTACATTCCCTACTCCCTTAAACGTCAATATTGGTCTCGGC
GCCATGAAAGTACTGGTCTGATGATAACAGAGTTGGTATCATCCTGGATG
GTGAATGAAGATCAAGAGCTGACCGAGCACAAGCCATTTTATGAATATAC
ACTTTCATGGACAAACCGTATCAATCGTGGTGGGTTGATGATTGTCAATG
AAGTTTTTTTTGTATTTGTAAAACGAATGGAAATGGTTGTGCGTGATGTG
CTTAACAAAACATTGATAAGAAATTATAAAGGTGAAGACCTTAGAGATTT
GATTATGACTAAAATGTTAAAAAATGAGTTGCTTGATAGGAGTTGGAGGG
GTATTACCAGGATCGTACACAATAAGGAGCTGGTTGATGTCATCAAGAAA
GTTATTTTCCGTAAATGGATGACTATGCGCATTAAATCCTTTGTTAATGC
TTGGATTCAAAGCATCAAATGGAAAGCAAGCAAAGAAAAGCAAGCCAAGA
AAGCTGCTAAAAACAATAAAGACAACGACAAAGAAGACAAAAGTAAAACT
AAAGCTAAGACAAACATTGATAAAGTTTCAAGACAAGCAGAGCCAGGGCT
CAGAAAAGCACTGTATAGCTCAAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000234_pilon | genome | sc0000234_pilon:474404..476824 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 481-1614:1135 |
| Aaloc | 400-477:1482 |
| Aaloc | 1-396:2422 |
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