|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000431_pilon:83244..86031+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021307 ID=XLOC_021307|Name=XLOC_021307|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2788bp|location=Sequence derived from alignment at sc0000431_pilon:83244..86031+ (Clytia hemisphaerica_ch_hm2_pilon)
atgatGTATGAAATTGAGCCACATCTTTATCTCTCGAATATCACTGCTGC
AAAAAATCAACAATTATTGCAACAAAACATTATCTCCATAGTCTTAACAG
TTGATGCTCAACCTCTAGGAGGTAGTGGTggtgaaatagaaaatatttat
attGAAATGAATGACGACCTGAAAACGAATTTGGTTGAGAAGCTACCTCA
ATGTATTGATGTGATTGAAGACTGTGTTATGGAGAAACGCAATATTCTAG
TACACTGGTAAAGACTAACGCATTTTAAATCTAGATGTAGTTTAAAAACG
CCATAGTAAAGACTAATCtccttttattcaaatttgtctTTGTTCGTTTC
AAAGAAGACTGGTGCATTTCGTTTGATGACTCTCTTAATTGCGATCTCGT
CAAGCTTGTTGAAGTAAATGAAGAAGAATACCTTGTCGGCCAGTGTCGgc
aaaagttgtttttttgcaaaaaattcaaatgagCCTAAAATGGAAACTTG
CATTTCCCTCTCATTAGcttcttttaaaattctttgtctAGGTAGCACAT
AAACCCAAAATTTAATTTCAGCGAAATAATGTTCAATTAACTAATTCCGT
CACTTTTTACTGGCGAGTTTTCCACTGATTTCCAACTTTCAAAACCTTCC
TTTTGTGTTTTTCAGTCATGCTGGTGTATCACGAAGTGCATCTGTTGTTA
TCGCTTACGTCATGAAGTCACGTGGCTTATCATTACGTCATGCTTCGGAT
CACGTGAAAAGCAGAAAACAAGACGTCATGTATGTCGAATCACTAACTCT
CCATTTTTTAAGTAGGCTATAATTACCTCGTGAAATTATGCTCCATCAAG
CTACAGTTCCCAAATCATTTCTTTTCGGTTTTAAACAAGATATACGAAAG
GAAagtattgatttttcgaagatGATCGATAGTGAACAAAATGGTCGGAC
TGACCATACAACTTTAAAGAACACTTGACAACTTTTGCAACATTATTAGA
AGCCAGTATTTTTTAGAACCGATTTGCTTTTactctttttttaactttca
ggCCAAACCCTTGTTTCATGTACCAACTGCAGGTTTTTGAGAAGATGGGA
TGTAAATTGGAGAAGGaatctactttttataaagAATTGATGGTGAAGTT
CGATCAACAAGAAAAAATCAGTAATGAATGCGTTCTTTCTTGTCTGTTAT
TCTTTGTCACAACAATGAAAAATTCCATCAACGATTGAGAATATATAGTG
AAGAAGGTTAGGATGTCTCATTTTGAACTTTCCAAGAAGTGCAAATTGCG
TACCATGGAGTTATATAGGTTATCCCCCAGTTTTATGACAATCTATCTTG
GTTTAATGAACTCTTTTCTAGGTCAAGCGATAAATGCTGGTGATTATTGG
TCCATCAAAGAGCAGGAAAGTGCTTCAAACAATAACAAAGAGATCAAGAA
AAGGATTACTTATAAGTGTCGCTCTTGCAGGTattataataatttatttt
gtttttttataccCATCGGGCTGTTTTTATTGACTACTATTGATGACTGG
TggcataaaatttcaaaaaatttaatcaagTCATAcattgttttccattt
tttcctTCGTAGAATCTTGTTGTTCACATCAGAAGCCCTAAGTGAAGACC
ACGCGGAAAATGCCAAAGAATGTACTTCACTTTATTTGCTTGAACCGCta
gattggatgaaaaaagccATGAATGCTGATATCCAAGGAAAGGTACTGAC
CCTCgtgtttatttcattattttgctTTAATTGAGGATatgatataatat
tttttccagACAACAATTTAAGAGGTTGATATATTACAAAGATGGTATTT
TCAGAAGAATGAACGTATTTAACTATCGCAGAAGCAACTAGGGTCTTGAT
ATTTAAACAGCAAAGTAAAGCTGTCTTTATGTCGGAATTTTTGGAGAAAC
AATGAAACGATCTCTTATTTTCGCTTTTTTAGATCAATTGCTTTAAATGC
AGTGGAAAGCTTGGAATGTTCAACTGGTCTGGTAGGTTAAACTTTAGGTT
AAACTTTCAATTTAGCATTTTCAAGGGTGTAGAACCTCAAAATCCAGCAG
CCGGAAAAAGAGCTGGCcgcattacttcgaataaacgccccgggcgtttg
ttaaattttttggattttaggaggggcgtttaaaatagggggcgtttatt
cgaagcaATACAGTATACagtcttttgacatttttcggctaactttgaaa
aattgacttgCATTCATAAAGCGGACCACTGCTGAACCGAAATAATCATA
CCGGGGTGTACCAGAAATAAATGACCATCCTTGAAGTAGAAtttttttAG
Ctccatttgaagaaaaattaaagtatttctggcacacccggtattttgat
caaattttagaTGTTTTCACCTATCCAGCATGAAAACTATCCCAAAACAT
AATCTATAATAACCTAAAATAAATGCCACAAGGTAGTACTTAGATATTGA
GTTAAATCGCCAACGAATGGAAAATAGTTGTTGTTTCCTGCGCTTGTAAC
TTGCtttttttAAAACGTCAAGTTCCAAATATACAAATATAAAAAAGCCC
GTCTTGTTTGAATAAATTAAATCAATTCGATTGTGATGATAATCAATCAT
GAGATACAAGTATTTTGCTCAAAAGTACAATTGGACCATTTTCTTTCACT
ACTAGGTAGAACATGTTCTTGTGGTATGTGGATTACACCATCATTTCAAG
TTCAGAAGTCACGAGTCGACCATTCGTTCCCAAAGTAA Coding sequence (CDS) from alignment at sc0000431_pilon:83244..86031+ >XLOC_021307 ID=XLOC_021307|Name=XLOC_021307|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1794bp|location=Sequence derived from alignment at sc0000431_pilon:83244..86031+ (Clytia hemisphaerica_ch_hm2_pilon)
atgatGTATGAAATTGAGCCACATCTTTATCTCTCGAATATCACTGCTGC
AAAAAATCAACAATTATTGCAACAAAACATTATCTCCATAGTCTTAACAG
TTGATGCTCAACCTCTAGGAGGTAGTGGTggtgaaatagaaaatatttat
attGAAATGAATGACGACCTGAAAACGAATTTGGTTGAGAAGCTACCTCA
ATGTATTGATGTGATTGAAGACTGTGTTATGGAGAAACGCAATATTCTAG
TACACTGatgatGTATGAAATTGAGCCACATCTTTATCTCTCGAATATCA
CTGCTGCAAAAAATCAACAATTATTGCAACAAAACATTATCTCCATAGTC
TTAACAGTTGATGCTCAACCTCTAGGAGGTAGTGGTggtgaaatagaaaa
tatttatattGAAATGAATGACGACCTGAAAACGAATTTGGTTGAGAAGC
TACCTCAATGTATTGATGTGATTGAAGACTGTGTTATGGAGAAACGCAAT
ATTCTAGTACACTGTCATGCTGGTGTATCACGAAGTGCATCTGTTGTTAT
CGCTTACGTCATGAAGTCACGTGGCTTATCATTACGTCATGCTTCGGATC
ACGTGAAAAGCAGAAAACAAGACGTCATGTATGTCGAATCACTAACTCTC
CATTTTTTAAGTAGTCATGCTGGTGTATCACGAAGTGCATCTGTTGTTAT
CGCTTACGTCATGAAGTCACGTGGCTTATCATTACGTCATGCTTCGGATC
ACGTGAAAAGCAGAAAACAAGACGTCATGTATGTCGAATCACTAACTCTC
CATTTTTTAAGTAGgCCAAACCCTTGTTTCATGTACCAACTGCAGGTTTT
TGAGAAGATGGGATGTAAATTGGAGAAGGaatctactttttataaagAAT
TGATGGTGAAGTTCGATCAACAAGAAAAAATCAgCCAAACCCTTGTTTCA
TGTACCAACTGCAGGTTTTTGAGAAGATGGGATGTAAATTGGAGAAGGaa
tctactttttataaagAATTGATGGTGAAGTTCGATCAACAAGAAAAAAT
CAGTCAAGCGATAAATGCTGGTGATTATTGGTCCATCAAAGAGCAGGAAA
GTGCTTCAAACAATAACAAAGAGATCAAGAAAAGGATTACTTATAAGTGT
CGCTCTTGCAGGTCAAGCGATAAATGCTGGTGATTATTGGTCCATCAAAG
AGCAGGAAAGTGCTTCAAACAATAACAAAGAGATCAAGAAAAGGATTACT
TATAAGTGTCGCTCTTGCAGAATCTTGTTGTTCACATCAGAAGCCCTAAG
TGAAGACCACGCGGAAAATGCCAAAGAATGTACTTCACTTTATTTGCTTG
AACCGCtagattggatgaaaaaagccATGAATGCTGATATCCAAGGAAAG
AATCTTGTTGTTCACATCAGAAGCCCTAAGTGAAGACCACGCGGAAAATG
CCAAAGAATGTACTTCACTTTATTTGCTTGAACCGCtagattggatgaaa
aaagccATGAATGCTGATATCCAAGGAAAGATCAATTGCTTTAAATGCAG
TGGAAAGCTTGGAATGTTCAACTGGTCTGATCAATTGCTTTAAATGCAGT
GGAAAGCTTGGAATGTTCAACTGGTCTGGTAGAACATGTTCTTGTGGTAT
GTGGATTACACCATCATTTCAAGTTCAGAAGTCACGAGTCGACCATTCGT
TCCCAAAGTAAGTAGAACATGTTCTTGTGGTATGTGGATTACACCATCAT
TTCAAGTTCAGAAGTCACGAGTCGACCATTCGTTCCCAAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000431_pilon | genome | sc0000431_pilon:83244..86031 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 817-897:2708 |
| Aaloc | 766-813:1983 |
| Aaloc | 637-765:1614 |
| Aaloc | 529-633:1374 |
| Aaloc | 409-525:1053 |
| Aaloc | 259-405:667 |
| Aaloc | 1-255:1 |
|
