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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000318_pilon:57701..61010+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021222 ID=XLOC_021222|Name=XLOC_021222|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3310bp|location=Sequence derived from alignment at sc0000318_pilon:57701..61010+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaagactttttttCATCGCAGGTTTTATCACCTTGCTTTTGATTTT
GGAGTTAGGTAAGtcctaccttatcggccctttttacaccggctttaatt
taacgccggccctttttacgccggcccttattacgccacagcctgatttt
gggcttacgccaattagggccgtaaataacaccaaaatttgtcagaatgg
ctatttatgcttcaatttacattaaactatcatttttcagtagtaaactg
ttgaaaattccattgaaaatcactgatttttgcgaagttttagatatgaa
gtaaaacaatggataatctTTTATCTTTGAATTATATACCCAAAGTcctt
taaataaagaaaaatggtcaaaaattaacgccacttttaagtaaaatttg
caaaatgttagccctttttacaccagcccttttaacgccggcccttcaTA
CGACAAGAGCCTAGAAATAACGCTAATAAAGGCCGGCGTAagaagggccg
ataaggtatatattTTCCACCCTGGATCTTTTTCCTGGTAGAGGGAGTTG
CACTCAATTCAAGCAATCTATCATAGATGCTACTCTGAAGGCTACGTTTT
TAAAGTTTCTCAAAGTGCAATATAAGATCATTTTCACACTTTACTGTTCC
GTTTTGCTCcagtatgattttcgttacggatcgagtgcgTTCATatttgg
tttcggaacgttttggATCAAggaaacggagcagttccgttccgatgaaa
aaagttgagtgaaaccgtttcgatctgttttgccttgtaacgtcttcttt
tttgacgtttcaaattttgacgttcacacttgtttcagAACCGTTTTGGa
gcggaacggaacggaaccgtaacgtctgaacatggtctaagggTTTAAAG
GAGAGGAAAAAGCACtgtaaaagtgtaaaaaaaaaaaggaaagcaaaatt
tttgggcaaagttttggggaaactgaccaaaaaagaacaggaaaaTTCAC
TTCAAGAGctagatttttggattttttttcaatttttgctaaGTTTTCAT
TGCATTGTAAGGGACCAACTTTGAGACCCTAAACTTCGTCCGTCCAGTTT
TCAGATCAACTGCCCCCTATATCAAGGTAAACACTGGTATTTGATTTATA
GGTCAAAACAGGTTTGAGTCTTTCTGATCTACCAATCCATAGTTATGGAA
CTACTCTTATCTTGTCTAAACTAAATTAAATACCAGCTTTTATAGGGGCa
aagctaaaaaaaacaaccggacgaataaaattgaaaagatgaaaTAGTCA
GCTGTAAAAAATGCTCTTGTTTTTCTTCATTAAGGTTTTGTACTTGGAAG
TGATCGATGTTTTCAATGTCACTCAGAAGTCTCCCAATGCAGACATCATA
ACGAAGTTTGTCAAAATAATTCATCATGCTTCATCAAATCTTATGTGTAA
GTAAAAAGCACAGTGGAAAAGCTTTACCCAAGAGTACAGGTGTTTTACCC
AGTCAGGAAGGCGGAATGTAACTTAAACACgttgtcacagacccgctggg
acatTCGCCCAACTTGAAAATTTGGTCGGAATTATGCCCCGGTGAAAAAA
TTCCACTACGacttcagccccactggaaagttGATTTAGATTTCGTCTCC
TTGAAAATCAAGGGAAAAATACCACTCCAAACTATAAAGTTTTTACATTG
AGATTTCCTGAGATTTCAATTGAAATTGTTATCCCCACTGAAAGAAAAAC
TTtacaccggggctgtgagacaggggttaaACAAAATATGTACGGAGTAC
ATTTGAGCGAAATATCTTTTTAGACCGAAAATCAAAatgtatgaaaatct
ttttactatcaaggtggaaaatttttcaacttttcgtcTACTTTGAGTGA
TTTTtggccacttttcagggtgaaaatgggaaaattttcctgacagggtc
ccaaatttaccaaatattcATATCTAACTGGGTTCATTTTTCAATGGatg
gcacgtccccgtcggccgtcatgGTCAGTGCCCCCCTGGGAATGGAGGAG
CACCTTTAATTCTGAAAaagcagaataaacaaaatattttgtgaaaattt
gtaCTTACGCGGCCTTGGGGAGGAAGAAAGTTGTTCTTTATATCGTTTAA
GAATGCTatgcggaagaaattttcgcggaatttaattttgcgaatttggG
TGTAAATCGCGAAaataaattccgcgaaacacaccaaaattgttaaatcg
cgaaattaaattccgcgaaattcgattttttttcttgttcttttattttg
ttgtttttgaccaggtaataccaaaaaatatggacacaattgatttttaa
gcattataacgtgtatttcttatcaaatataaacaaatataaataacTCC
GTAATGGTTAAAAGTTAATttaagttgataacttcttcttaatcgcgaaa
ttaaattccgtgaaacttttgaaatcggctcattcgcgaaattaaattcc
gcgaaatttgccattttgaaactctgattcgcgaaattaaattccgcgaa
aatttcttctcgcgaaaatttcttcccttaaggtaagcgTATTTTACGAA
AATGGGTTCGATAATATCCCTTCATCTTTTCTCTTACTTAGTCCTGTCAA
CAAAACAGAGATGGTTTACCATACTGGCTGTGTACAGAAATCTGAATGTG
AACAGATGTGTCAACAAAATGCTGCTTCTAACTCTACTGTGGTGATGGCT
TCTTGCAAGGTATATTGACCTTGATTTTAGTTTGATTTCTACCACAGTAT
AATGGAAACAGAAATTTAGCTAGTACCAAACGTTATTTTGAAGGATCCTC
GTGAATGCGTAAATGGATTTTTTATCGTTGCAGGTAAATGCgtgtaaata
ataaaaaaagattttgtgaaTCCATGAATTGAAAACATTTGCGTAAACGT
GAAACTTGTGTTTTTAATTGTGTCAGTATGTTATAGTCTcgcaatttttt
aaaaacaaatgcgTTAATTTTTCCGTTTAGCGAAAATTTCTGTCGATCTA
GGCAATTTTTAcctaatttcgaaaaaaaaaatcccgCTTTTCCTAAAAGT
CGACGAACAAAGAAATTGCGTGAACGTAGAGAAAAAGTGTAGCAAAGTGA
CCTCAATATTCATCAATCTAAAATATTTTAGGTGTCCTGCTGCAACGAAG
ATTTCTGCAACAACATTGATGACTACATCAACAGCGCGACCTCGCAACAA
ATGGATACCATGATGGCTTCCTTCTTTGTTGTCATGACAACCGTCAAAAT
GGTGTTTTGA Coding sequence (CDS) from alignment at sc0000318_pilon:57701..61010+ >XLOC_021222 ID=XLOC_021222|Name=XLOC_021222|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=834bp|location=Sequence derived from alignment at sc0000318_pilon:57701..61010+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaagactttttttCATCGCAGGTTTTATCACCTTGCTTTTGATTTT
GGAGTTAGatgaaaagactttttttCATCGCAGGTTTTATCACCTTGCTT
TTGATTTTGGAGTTAGGTTTTGTACTTGGAAGTGATCGATGTTTTCAATG
TCACTCAGAAGTCTCCCAATGCAGACATCATAACGAAGTTTGTCAAAATA
ATTCATCATGCTTCATCAAATCTTATGTGTTTTGTACTTGGAAGTGATCG
ATGTTTTCAATGTCACTCAGAAGTCTCCCAATGCAGACATCATAACGAAG
TTTGTCAAAATAATTCATCATGCTTCATCAAATCTTATGTTCCTGTCAAC
AAAACAGAGATGGTTTACCATACTGGCTGTGTACAGAAATCTGAATGTGA
ACAGATGTGTCAACAAAATGCTGCTTCTAACTCTACTGTGGTGATGGCTT
CTTGCAAGTCCTGTCAACAAAACAGAGATGGTTTACCATACTGGCTGTGT
ACAGAAATCTGAATGTGAACAGATGTGTCAACAAAATGCTGCTTCTAACT
CTACTGTGGTGATGGCTTCTTGCAAGGTGTCCTGCTGCAACGAAGATTTC
TGCAACAACATTGATGACTACATCAACAGCGCGACCTCGCAACAAATGGA
TACCATGATGGCTTCCTTCTTTGTTGTCATGACAACCGTCAAAATGGTGT
TTTGAGTGTCCTGCTGCAACGAAGATTTCTGCAACAACATTGATGACTAC
ATCAACAGCGCGACCTCGCAACAAATGGATACCATGATGGCTTCCTTCTT
TGTTGTCATGACAACCGTCAAAATGGTGTTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000318_pilon | genome | sc0000318_pilon:57701..61010 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 289-417:3182 |
| Aaloc | 172-288:2643 |
| Aaloc | 61-168:1337 |
| Aaloc | 1-57:1 |
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