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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000318_pilon:10591..14904+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021221 ID=XLOC_021221|Name=XLOC_021221|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4314bp|location=Sequence derived from alignment at sc0000318_pilon:10591..14904+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcttccacacAACTCATCAGATCTCTTCGACAACCATTGGTATGTAT
AaattattgttttaatttttattcttaACTGATTGAAACACAttcccatt
ttttttttttgctttgatatACAGTACCAATACgtggcttttttttaatt
taaagatACTGTCTGTTGGCTATTCTGCTATGATTTTCCTCTAAATTCTT
TAAGAAAACACAACTTAGCAGAATTTAGTTGAATGATGCTTCTGTGAAGC
CAATAGTCAAACATTGACATTATGTAGTAACGTTGCTATTTTGGGTGTGA
GGATCTTAGATAGTGTGGATGTGAAGCTTTGTTGATTGTTGTAGAGTCTT
CGAGTTTGAATAACAGTGACCTTATGTACATTTTTCCTGTTGCTTTAAGT
TGCTTTAAGTAAGCCTATGTTCATTGAACAGTGGAGTCTATTTACTCGGA
CCTTtataacttgaatgtctccttGACTCGAATGAggtttatggtccctt
cagttaacaatgccttctAAACCTTATTCTATGACTCAACATtttcttaa
ctcaaacaaattagTGTTCGAGTTAGGGAGACCCAAACCGTAAAACCCAT
TTGtttttttCCTGTTTGGCAATATCAGATTACACCATACAAGAAATATT
TGCACAACTTAAATCTATATATTGTTTTCTCTTCTAGCAACAATGTGTGT
ACAGAACCACTGTTCGATCTCTGTCAACAGCAAGAACTGTAGCCTGCAAA
GTCACCGATAAAGGTATGTTTTGAATGTTgtctaaaataccaaaattaaa
GATACTGTagtattacttttattttttatttttaaactttacTGTGTATC
TAGTTCTAGCTAAACTATATTCTTTAAATAATGCGCACTGTTACCAATAA
CTTATTCTTCTTTTAGCATCTACACCAGTAGTTGAAGTTGCTGCTGAAAA
CGCGAAATGTatgatttgttgtttttaacTGTTGTTACAGCTCTTTAATC
TGTTACTTTAGTTTTCCCATGTTTACAAGATTCCTCTGTTCATTGGAGAA
ACTCACCCAGCCCTAGTTTTCGCTTTACAAGGTGTCACTTACACCCCATA
CCAGTTGACATCCATTGTATATTAGTATGAGTAGAGGTGGATGGATGATC
ACCAATGAAAAGTGCTCTaaaaaaaGGAACAATATAATAATATCCATTGT
ATAGCGTAGTTAGCCTTTTTAAGATGCCCAAATGCAGAGAAGTGTCGTTC
TGGAGGGAATTGATTGTTGGATATGGCTGCCACACATTGTTTGGAGTGAT
TCTCGAGCTGTCTAAGGCTCTTAGGCCAAAGTAGGGTTCCTGGTTTGAGA
TAACTGGATTATCCACTCAAAACATCGAAGATCAAACTGTTCACTTCATA
TGTTTATTCTCTTCTTTTAGCTACAACGCCTATAGTGGAGGCTGTAGCAG
AGGCAATTGCTGATCCCACGCCAGCGGAGTGTAAGATGTGTCTTCTTTTC
GACGCTTAGGTCGTCCCTCTGTTAGAATCAGAGAACAGACACATCACGCA
CACACACCATTCATTTGTTTCTTCTATCTTGCTATATTAACTCGGTAAGC
TCTGGTTTCGACGGCAGAATTTCctccctgcctattctaattattagtag
agtaggcagaaagttggtgtttaaaatctttgcttgaaaaggattggtca
ttgcattgacgtcaaaaaaggacAACTTTTACCAACTTTAGTTCACAACT
GGAATAGGCAGGACAAAAGGTAGGCCGTCCAACCAGAGCTAATTCATTAC
ATTGTTTTGTCACCAGTATCGTATCTATTCAGTTTATTTCATGATACATC
AACTACATACCATCGTAACTTCTACTAATGTAATTTATATAAAGCCAATA
ACAATCTACTTACACTTGACATAGAAATAATAAACTAACCTTATATCAGC
TTAGACAGCTTATCAGTGATCACGTCAGGTGACACTCCAACAGATTAATA
CAATTGTTGATACGAACAACCATAATCTTTTCAATTATAGCTGTCGCAAT
AGAATCGGAAGCAGTCGCCGAAGAAACCGTCGAAGCTGTCTCTGAAGTTG
CCGAAGCCGTTGAATGTATGCAAACCAATTAACAGTTTAGACGTTTAGAA
ACTCTCTCTTAGTATGAGAAGTTTATAGCATACACGTACACCGTTCGTCT
GTATTTTCCGTATAAATTGCTCTTTCGTTATACTGTAGTACCATAGTAAT
ATCTTTAGATCTAGCTATCTTGTCTGCTTTACTTACCTGCTTTATCGTTG
TCATCGCGTGGAATGTAGACGTTTAGAAATCTTCTCTTAGAACGAGAAGA
AGGGGTCCAACATACACACACAACATTTGTTATGAACTTGTATTAAGTTC
AACTCTAAAGTGTGTTTCAATATTCTTGTAGCAGTTGTCGAGGAAGTTGC
TGCCGAAACTGCAGTTGTTGAGGAAGCTGCTGCCGAAACTACAGTTGTCG
AGGAAGCTGCTGCTGAAACTGAAGCAGTCATTGAGGAGGCTGCTGCCGAA
ACTGAAGCAGTCGTCGAGGAAGTTGCTGCTGAAACTGAAGCTGTTGTCGA
GGAGGTAGCTGCTGAAACTGAAGCCATCGTCGAAGAGGCTGCTGCCGAGA
CTGAAGCAGTTGTTGAGGAAGTTGTTGCCGAAACTGAAGCCATCGTCGAA
GAGGCTGCTGCTGAAACTGAAGCAGTCGTCGACGAAATTGTTGCCGAAAC
TGAAGCCATCGTCGAAGAGGCTGCTGCCGGGACTGAAGCAGTTGTTGAGG
AAGTTGTTGCCGAAACTGAAGCCATCGTCGAAGAGGCTGCTGCTGAAACT
GAAGCAGTCGTCGAGGAAGTTGTTGCAGAAACTGAAGCCATCGTCGAGGA
GGCTGCTGCTGAAACTGAAGCAGTCGTCGAGGAAGTTGTTGCCGAAACTG
AAGCCATCGTCGAAGAGGTTGTTGCTGAAACTGAAGCTGTTGTCGAAGAG
GCTGCTGCCGAGACTGAAGCAGTTGTTGAGGAAGTTGCTGCCGAAACTGA
AGCCATCGTCGAAGAGGTTGTTGCTGAAACTGAAGCAGTCGTTGAGGAGG
CTGCTGCCGAGACTGAAGCAGTTGTTGAGGAAGTTGCTGCCGAAACTGAA
GCCATCGTCGAAGAGGTTGTTGCTGAAGCTGAAGCAGTCGTCGAGGAAGT
TGTTGCTGAAACTGAAGCAGTCATCGAAGAGGCTGCTGCTGAAACTGAAA
CAATTATTGAGGAAGTTGCTGTCGAAGCTGAAGTAGTCGTCGAGGAGGTA
GCTGCTGCTGAAACTGAAGCTGTTGTTGAGGAGGCTGCTGCTGAAACTGA
AGCAGTCATCGAGGAAGTTGCCGCTGAGACTGAAGCAGTTGTCGAGGAAG
TCGCTGCCGAAACTGAAGCGGTTGTCGAGGAGGCTGCCGCTGAAACTGAA
GCAGTTGTCGAGGAGGCTGCCGCTGAAACTGAAGCAGTTGTCGAGGAACT
CACTGCCGAAACTGAAGCGGTTGTCGAGGAGGCTGCCGCTGAAACTGAAG
CAGTTGTCGAGGAGGCTGCTGCTGAAACTGAAGCAGTCGTCGAGGAAGTT
GTTGCTGAGACTGAAGCAGTCGTCGAAAAAGTTACTGCAGATTCTGAAGC
AGTCATCGAAGAGGCAGCTACTGAAACTGAAACAGTCGTCGATGAGGTAG
CCCCTGAAGTAGAAGCAGTCGCTGAAGAGGCAGCCCCTGAAGTAGAAGCA
GTCGCTGAAGAGGCAGCCCCTGAAGTAGAAGCCGTCGCTGAGGAGGCAGC
CCCTGAAGTAGAAGCAGTCGCTGAGGAGGCAGCCCCTGAAGTAGAAGCAG
TCGTTGAGGAGGCAGCCCCTGAAGTAGAAGCAGTCGCTGAGGAGGCAGCC
CCTGAAGTAGAAGCAGTTGTTGAGGAGGTAGCTCCTGAGCCAGAGGTTGT
AGCAGAAGAGGCATCTGCTGGACCAGAGAGTATGTTGTTAATGCTCTTAA
ATTTTTACGCCCTTAATAGTTgtctttggtttgattttccCAGCAATCTC
GAGTTCGTTATCCTCTGATCTTTAATTAAGTGCGTCTGAACTTTGCTTTT
CTTTCTCTTCCCTTAGAAAAGGGCAAATGAATTGAACTTTAGAAACTGCT
GCTTTCTTCATCTCCTGCGATTTTCTGAGTCCTTTTCCTAGCTCTACTTT
TACTATCCACTAATACTGAATACTGATAATAATTTTCTGTAATTTATTTG
TCCTTTTCTAGAACCAGAGCCGAAAACTCTTTGGGAAAAGATTAAACgaa
tcttcaatttttaa Coding sequence (CDS) from alignment at sc0000318_pilon:10591..14904+ >XLOC_021221 ID=XLOC_021221|Name=XLOC_021221|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3336bp|location=Sequence derived from alignment at sc0000318_pilon:10591..14904+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcttccacacAACTCATCAGATCTCTTCGACAACCATTGatgtcttc
cacacAACTCATCAGATCTCTTCGACAACCATTGCAACAATGTGTGTACA
GAACCACTGTTCGATCTCTGTCAACAGCAAGAACTGTAGCCTGCAAAGTC
ACCGATAAAGCAACAATGTGTGTACAGAACCACTGTTCGATCTCTGTCAA
CAGCAAGAACTGTAGCCTGCAAAGTCACCGATAAAGCATCTACACCAGTA
GTTGAAGTTGCTGCTGAAAACGCGAAATCATCTACACCAGTAGTTGAAGT
TGCTGCTGAAAACGCGAAATCTACAACGCCTATAGTGGAGGCTGTAGCAG
AGGCAATTGCTGATCCCACGCCAGCGGAGTCTACAACGCCTATAGTGGAG
GCTGTAGCAGAGGCAATTGCTGATCCCACGCCAGCGGAGTCTGTCGCAAT
AGAATCGGAAGCAGTCGCCGAAGAAACCGTCGAAGCTGTCTCTGAAGTTG
CCGAAGCCGTTGAATCTGTCGCAATAGAATCGGAAGCAGTCGCCGAAGAA
ACCGTCGAAGCTGTCTCTGAAGTTGCCGAAGCCGTTGAATCAGTTGTCGA
GGAAGTTGCTGCCGAAACTGCAGTTGTTGAGCAGTTGTCGAGGAAGTTGC
TGCCGAAACTGCAGTTGTTGAGGAGGCTGCTGCCGAAACTGAAGCAGTCG
TCGAGGAAGTTGCTGCTGAAACTGAAGCTGTTGTCGAGGAGGTAGCTGCT
GAAACTGAAGCCATCGTCGAAGAGGCTGCTGCCGAGACTGAAGCAGTTGT
TGAGGAAGTTGTTGCCGAAACTGAAGCCATCGTCGAAGAGGCTGCTGCTG
AAACTGAAGCAGTCGTCGACGAAATTGTTGCCGAAACTGAAGCCATCGTC
GAAGAGGCTGCTGCCGGGACTGAAGCAGTTGTTGAGGAAGTTGTTGCCGA
AACTGAAGCCATCGTCGAAGAGGCTGCTGCTGAAACTGAAGCAGTCGTCG
AGGAAGTTGTTGCAGAAACTGAAGCCATCGTCGAGGAGGCTGCTGCTGAA
ACTGAAGCAGTCGTCGAGGAAGTTGTTGCCGAAACTGAAGCCATCGTCGA
AGAGGTTGTTGCTGAAACTGAAGCTGTTGTCGAAGAGGCTGCTGCCGAGA
CTGAAGCAGTTGTTGAGGAAGTTGCTGCCGAAACTGAAGCCATCGTCGAA
GAGGAGGCTGCTGCCGAAACTGAAGCAGTCGTCGAGGAAGTTGCTGCTGA
AACTGAAGCTGTTGTCGAGGAGGTAGCTGCTGAAACTGAAGCCATCGTCG
AAGAGGCTGCTGCCGAGACTGAAGCAGTTGTTGAGGAAGTTGTTGCCGAA
ACTGAAGCCATCGTCGAAGAGGCTGCTGCTGAAACTGAAGCAGTCGTCGA
CGAAATTGTTGCCGAAACTGAAGCCATCGTCGAAGAGGCTGCTGCCGGGA
CTGAAGCAGTTGTTGAGGAAGTTGTTGCCGAAACTGAAGCCATCGTCGAA
GAGGCTGCTGCTGAAACTGAAGCAGTCGTCGAGGAAGTTGTTGCAGAAAC
TGAAGCCATCGTCGAGGAGGCTGCTGCTGAAACTGAAGCAGTCGTCGAGG
AAGTTGTTGCCGAAACTGAAGCCATCGTCGAAGAGGTTGTTGCTGAAACT
GAAGCTGTTGTCGAAGAGGCTGCTGCCGAGACTGAAGCAGTTGTTGAGGA
AGTTGCTGCCGAAACTGAAGCCATCGTCGAAGAGGCTGCTGCCGAGACTG
AAGCAGTTGTTGAGGAAGTTGCTGCCGAAACTGAAGCCATCGTCGAAGAG
GTTGTTGCTGAAGCTGAAGCAGTCGTCGAGGAAGTTGTTGCTGAAACTGA
AGCAGTCATCGAAGAGGCTGCTGCTGAAACTGAAACAATTATTGAGGAAG
TTGCTGTCGAAGCTGAAGTAGTCGTCGAGGAGGTAGCTGCTGCTGAAACT
GAAGCTGTTGTTGAGGAGGCTGCTGCTGAAACTGAAGCAGTCATCGAGGA
AGTTGCCGCTGAGACTGAAGCAGTTGTCGAGGAAGTCGCTGCCGAAACTG
AAGCGGTTGTCGAGGAGGCTGCCGCTGAAACTGAAGCAGTTGTCGAGGAG
GCTGCCGCTGAAACTGAAGCAGTTGTCGAGGAACTCACTGCCGAAACTGA
AGCGGTTGTCGAGGAGGCTGCCGCTGAAACTGAAGCAGTTGTCGAGGAGG
CTGCTGCTGAAACTGAAGCAGTCGTCGAGGAAGTTGTTGCTGAGACTGAA
GCAGTCGTCGAAAAAGTTACTGCAGATTCTGAAGCAGTCATCGAAGAGGC
AGCTACTGAAACTGAAACAGTCGTCGATGAGGTAGCCCCTGAAGTAGAAG
CAGTCGCTGAAGAGGCAGCCCCTGAAGTAGAAGCAGTCGCTGAAGAGGCA
GCCCCTGAAGTAGAAGCCGTCGCTGAGGAGGCAGCCCCTGAAGTAGAAGC
AGTCGCTGAGGAGGCAGCCCCTGAAGTAGAAGGCTGCTGCCGAGACTGAA
GCAGTTGTTGAGGAAGTTGCTGCCGAAACTGAAGCCATCGTCGAAGAGGT
TGTTGCTGAAGCTGAAGCAGTCGTCGAGGAAGTTGTTGCTGAAACTGAAG
CAGTCATCGAAGAGGCTGCTGCTGAAACTGAAACAATTATTGAGGAAGTT
GCTGTCGAAGCTGAAGTAGTCGTCGAGGAGGTAGCTGCTGCTGAAACTGA
AGCTGTTGTTGAGGAGGCTGCTGCTGAAACTGAAGCAGTCATCGAGGAAG
TTGCCGCTGAGACTGAAGCAGTTGTCGAGGAAGTCGCTGCCGAAACTGAA
GCGGTTGTCGAGGAGGCTGCCGCTGAAACTGAAGCAGTTGTCGAGGAGGC
TGCCGCTGAAACTGAAGCAGTTGTCGAGGAACTCACTGCCGAAACTGAAG
CGGTTGTCGAGGAGGCTGCCGCTGAAACTGAAGCAGTTGTCGAGGAGGCT
GCTGCTGAAACTGAAGCAGTCGTCGAGGAAGTTGTTGCTGAGACTGAAGC
AGTCGTCGAAAAAGTTACTGCAGATTCTGAAGCAGTCATCGAAGAGGCAG
CTACTGAAACTGAAACAGTCGTCGATGAGGTAGCCCCTGAAGTAGAAGCA
GTCGCTGAAGAGGCAGCCCCTGAAGTAGAAGCAGTCGCTGAAGAGGCAGC
CCCTGAAGTAGAAGCCGTCGCTGAGGAGGCAGCCCCTGAAGTAGAAGCAG
TCGCTGAGGAGGCAGCCCCTGAAGTAGAAGAACCAGAGCCGAAAACTCTT
TGGGAAAAGATTAAACgaatcttcaatttttaaAACCAGAGCCGAAAACT
CTTTGGGAAAAGATTAAACgaatcttcaatttttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000318_pilon | genome | sc0000318_pilon:10591..14904 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1618-1668:4264 |
| Aaloc | 868-1614:3100 |
| Aaloc | 337-867:2536 |
| Aaloc | 298-336:2434 |
| Aaloc | 223-294:2043 |
| Aaloc | 163-219:1423 |
| Aaloc | 121-159:919 |
| Aaloc | 43-117:688 |
| Aaloc | 1-42:1 |
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