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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000247_pilon:48392..49908- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021170 ID=XLOC_021170|Name=XLOC_021170|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1517bp|location=Sequence derived from alignment at sc0000247_pilon:48392..49908- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTCAGGTGAGCGCCATGAAGTTGAATCGTTTTCCATCGGGGAGAA
CCAAAAACTACGCGAAACGAAAAGTCGTTTGGATAACCTCAAAGCACGAT
CTTTTACGCCTGAAGATGTCTTACAGCAACAGCAGATCAAAACTAGCGAA
CTACAAAAGACAAAAGAGAGAATCAAAGATGCTTTCAGCCACACTAAGCC
TTCGAGAGCGGAAAGTGACGTTTCACACCGTACTCAATCACCCAGAATGG
ACAACGTAAAACTTTCAAGCGATGTTGAAACTGGATACAAACGATTTTTC
CGCATTCCTGGTGAACCGCCTACTCTGGAACAGACCACGGAGAAAGATAG
CGAAGAATATAAAGTCTTTGTATTAGAAGATGACCAATCAAAGGAATTAT
CGAGTAACCCGACATCTTCGAATCGTGAAAATAACCCACGCGATTATTCT
CCTGTTAATTTTTCGACCGATATTTCTATAAAACGACACGACAAAATACA
GTATTCAGTGGAGCACCATAATTCTTCATGCTACTTTTCCAACTCACCAA
ACCTTTCTCACCAAATACTCGTGATAATCCATCGTTCATCCGCCCTGGAG
TGTCAATAAAATCTTCTGAAAAACCTACAGAAACGAACCTGTATGACAGC
CCTATGTTTCACTACAACAACCGAATCATTTCAAACTTTAATAAACCCCA
AGCGAAATTTCGAATGGCCCATCCAGGTGTGGATGAACTTAACTTGCAAT
CCAAGTACGATATTCAACATGATCACCAACAGATGAAAGACCCTCGGAAG
GAATTTATCGAACTTGATCGCAAATTTGATTTCGTAACAGAAAAAGAGAA
AACGCGCGCGAAAGATATGATTACTGCTTCCATGGTAACACCTCATGAGG
AGAAAACGAACCAATCAGCGACGAACCTTCCTGATTCTCCGCAGAAAAAG
AAAGTACGGCTTGCCCTAAATCATCAAATGGCACCGAAAAGGAAGCCGAA
GAAAGCCACTGAGAAAGCTGCGACTCCACGCTCAATGGCGCTTACTGATG
ACAATCCTTTCTCGGGTCCTAACAAGGCAGCTGAGGAGATTTCCACACTC
GTTGAAATCGATAAAGACATTCGCGCGGAACTGACACAGGAAATCAAAAC
ACTTTACTGGCGAATCGAAGAGGAAAAGAAATATGTTTGTAAATTATGTG
AGAAGACATTCGAAAGGTTCAGCAATTTGAATGCGCACGTAACAATGCAC
CTTGAATTGAAACCGTATATTTGTAAATCATGTGGTTCCTCTTACAAACT
GCGATCTCTTTTGAATGATCATATTCGAATAAAACATCTGAAGAAGTCGG
GATACGTCAATTGTCAATCGTGCAACGGTAGGTTCAAACTAGGTTCCAGT
TATTTGAAACACCGAGCGTTTTGTACAAACGTGAGTAATAGTTCGCCAAC
GAAGGAACAAGATAACTCGACGAATACTTCTCAGAATGAACTTAAAGAAG
AAACTTCTCTTGAGTAA Coding sequence (CDS) from alignment at sc0000247_pilon:48392..49908- >XLOC_021170 ID=XLOC_021170|Name=XLOC_021170|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3034bp|location=Sequence derived from alignment at sc0000247_pilon:48392..49908- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTCAGGTGAGCGCCATGAAGTTGAATCGTTTTCCATCGGGGAGAA
CCAAAAACTACGCGAAACGAAAAGTCGTTTGGATAACCTCAAAGCACGAT
CTTTTACGCCTGAAGATGTCTTACAGCAACAGCAGATCAAAACTAGCGAA
CTACAAAAGACAAAAGAGAGAATCAAAGATGCTTTCAGCCACACTAAGCC
TTCGAGAGCGGAAAGTGACGTTTCACACCGTACTCAATCACCCAGAATGG
ACAACGTAAAACTTTCAAGCGATGTTGAAACTGGATACAAACGATTTTTC
CGCATTCCTGGTGAACCGCCTACTCTGGAACAGACCACGGAGAAAGATAG
CGAAGAATATAAAGTCTTTGTATTAGAAGATGACCAATCAAAGGAATTAT
CGAGTAACCCGACATCTTCGAATCGTGAAAATAACCCACGCGATTATTCT
CCTGTTAATTTTTCGACCGATATTTCTATAAAACGACACGACAAAATACA
GTATTCAGTGGAGCACCATAATTCTTCATGCTACTTTTCCAACTCACCAA
ACCTTTCTCACCAAATACTCGTGATAATCCATCGTTCATCCGCCCTGGAG
TGTCAATAAAATCTTCTGAAAAACCTACAGAAACGAACCTGTATGACAGC
CCTATGTTTCACTACAACAACCGAATCATTTCAAACTTTAATAAACCCCA
AGCGAAATTTCGAATGGCCCATCCAGGTGTGGATGAACTTAACTTGCAAT
CCAAGTACGATATTCAACATGATCACCAACAGATGAAAGACCCTCGGAAG
GAATTTATCGAACTTGATCGCAAATTTGATTTCGTAACAGAAAAAGAGAA
AACGCGCGCGAAAGATATGATTACTGCTTCCATGGTAACACCTCATGAGG
AGAAAACGAACCAATCAGCGACGAACCTTCCTGATTCTCCGCAGAAAAAG
AAAGTACGGCTTGCCCTAAATCATCAAATGGCACCGAAAAGGAAGCCGAA
GAAAGCCACTGAGAAAGCTGCGACTCCACGCTCAATGGCGCTTACTGATG
ACAATCCTTTCTCGGGTCCTAACAAGGCAGCTGAGGAGATTTCCACACTC
GTTGAAATCGATAAAGACATTCGCGCGGAACTGACACAGGAAATCAAAAC
ACTTTACTGGCGAATCGAAGAGGAAAAGAAATATGTTTGTAAATTATGTG
AGAAGACATTCGAAAGGTTCAGCAATTTGAATGCGCACGTAACAATGCAC
CTTGAATTGAAACCGTATATTTGTAAATCATGTGGTTCCTCTTACAAACT
GCGATCTCTTTTGAATGATCATATTCGAATAAAACATCTGAAGAAGTCGG
GATACGTCAATTGTCAATCGTGCAACGGTAGGTTCAAACTAGGTTCCAGT
TATTTGAAACACCGAGCGTTTTGTACAAACGTGAGTAATAGTTCGCCAAC
GAAGGAACAAGATAACTCGACGAATACTTCTCAGAATGAACTTAAAGAAG
AAACTTCTCTTGAGTAAATGTATTCAGGTGAGCGCCATGAAGTTGAATCG
TTTTCCATCGGGGAGAACCAAAAACTACGCGAAACGAAAAGTCGTTTGGA
TAACCTCAAAGCACGATCTTTTACGCCTGAAGATGTCTTACAGCAACAGC
AGATCAAAACTAGCGAACTACAAAAGACAAAAGAGAGAATCAAAGATGCT
TTCAGCCACACTAAGCCTTCGAGAGCGGAAAGTGACGTTTCACACCGTAC
TCAATCACCCAGAATGGACAACGTAAAACTTTCAAGCGATGTTGAAACTG
GATACAAACGATTTTTCCGCATTCCTGGTGAACCGCCTACTCTGGAACAG
ACCACGGAGAAAGATAGCGAAGAATATAAAGTCTTTGTATTAGAAGATGA
CCAATCAAAGGAATTATCGAGTAACCCGACATCTTCGAATCGTGAAAATA
ACCCACGCGATTATTCTCCTGTTAATTTTTCGACCGATATTTCTATAAAA
CGACACGACAAAATACAGTATTCAGTGGAGCACCATAATTCTTCATGCTA
CTTTTCCAACTCACCAAACCTTTCTCACCAAATACTCGTGATAATCCATC
GTTCATCCGCCCTGGAGTGTCAATAAAATCTTCTGAAAAACCTACAGAAA
CGAACCTGTATGACAGCCCTATGTTTCACTACAACAACCGAATCATTTCA
AACTTTAATAAACCCCAAGCGAAATTTCGAATGGCCCATCCAGGTGTGGA
TGAACTTAACTTGCAATCCAAGTACGATATTCAACATGATCACCAACAGA
TGAAAGACCCTCGGAAGGAATTTATCGAACTTGATCGCAAATTTGATTTC
GTAACAGAAAAAGAGAAAACGCGCGCGAAAGATATGATTACTGCTTCCAT
GGTAACACCTCATGAGGAGAAAACGAACCAATCAGCGACGAACCTTCCTG
ATTCTCCGCAGAAAAAGAAAGTACGGCTTGCCCTAAATCATCAAATGGCA
CCGAAAAGGAAGCCGAAGAAAGCCACTGAGAAAGCTGCGACTCCACGCTC
AATGGCGCTTACTGATGACAATCCTTTCTCGGGTCCTAACAAGGCAGCTG
AGGAGATTTCCACACTCGTTGAAATCGATAAAGACATTCGCGCGGAACTG
ACACAGGAAATCAAAACACTTTACTGGCGAATCGAAGAGGAAAAGAAATA
TGTTTGTAAATTATGTGAGAAGACATTCGAAAGGTTCAGCAATTTGAATG
CGCACGTAACAATGCACCTTGAATTGAAACCGTATATTTGTAAATCATGT
GGTTCCTCTTACAAACTGCGATCTCTTTTGAATGATCATATTCGAATAAA
ACATCTGAAGAAGTCGGGATACGTCAATTGTCAATCGTGCAACGGTAGGT
TCAAACTAGGTTCCAGTTATTTGAAACACCGAGCGTTTTGTACAAACGTG
AGTAATAGTTCGCCAACGAAGGAACAAGATAACTCGACGAATACTTCTCA
GAATGAACTTAAAGAAGAAACTTCTCTTGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000247_pilon | genome | sc0000247_pilon:48392..49908 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 553-1515:964 |
| Aaloc | 526-552:992 |
| Aaloc | 1-525:1518 |
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