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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:1451461..1452618+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021123 ID=XLOC_021123|Name=XLOC_021123|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1158bp|location=Sequence derived from alignment at sc0000063_pilon:1451461..1452618+ (Clytia hemisphaerica_ch_hm2_pilon)
CATATAATACTTTCTTGGCAGGTTGGCATAACGGATTCGGAAAATCAGCG
GCGAACGTTCGAAGTGTTTAAGCTATACCTAAACAGAGAAAAAGACCTTT
ACACCGGAAACTCATATATCCGAAAATGTCTTCTGTACGATAATCAGCAC
CAATGCGTCGATGCTGAATTTGTCAAAGATCTTGAGTTGTTGACCCGCTT
AGAGATCTGGGGCTGGAACTGGTTGGGTGATGAGTACAACCCCTTTCTTC
ACTTGTTTCCAAACCTCCGTGTGTTATTCGTTCGGCCAGTGCGTCATGTT
GACGCGGATGAGATCAGTATCACTTTAACTGACTTCCCATTGTTACGGAG
GCTGAAGATTGACTTGCATCAAAGCGGAAAGGTTCACATGTATTGTGCGT
TTGGTAGTAATCAATGTCTCACTCATTCGGAAGGGTTGAAAGAAATGGAA
ATTCGGTTTCCACCAAATGGTGATGTAAAGTATCCTTTCAAATTAATTGG
CAAATGGAGCCTGCCCAAGCAAATACATGATTTGAGATTGTTGAGTGTTA
GTCTTGTGGATCATTACAATGAAGAAGCAAAAACCACTTCCAATGGTGAT
GGTTTCGGATTCAAGAGACAAAACATGAGACATGTCACACCTGCAATTAA
GGTTCAACAAACTAAAGCAGCCAAGAAAAACACTCAGGCAAACAATGGAA
GAGAAATTCACCCGATTTTTGATCGAACAGAGTTCGGGAACGTTGAAATC
AGTCTATTTTCTATGTCAATGGCAGGCTTGACCTTAGGGGATTTCAAGTT
ACCATACGTCAAGGGTAAATTTAAGATCTCCGCTGACGATGATATAACGG
AGGCTGTTGGAAAGCAGCTAATTAAGATGGAGGTGGAATATGTGGCAGAT
ATCCCGACTCCTTTGTATCCAATAATGATTTACTTCGTTTATATGCAGAA
GAACTTTGAAAAGTTCCAATTCATGAGCTGTCATTACGCCAATACTTTAT
TGAAGAATATGAAAGTGGAAACCATCCTGTCACTGAAAAAGATGATTGTA
CGTGGTTTCCACATGAAGTTGTCAGAGGTGATTAAGCTAGCAAAAGGTGA
TGTGAATTACAAACGAGTGAATGAAATCAGAGTGTTTGTGTATAGTCTTG
ATGTTGAT Coding sequence (CDS) from alignment at sc0000063_pilon:1451461..1452618+ >XLOC_021123 ID=XLOC_021123|Name=XLOC_021123|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2250bp|location=Sequence derived from alignment at sc0000063_pilon:1451461..1452618+ (Clytia hemisphaerica_ch_hm2_pilon)
CATATAATACTTTCTTGGCAGGTTGGCATAACGGATTCGGAAAATCAGCG
GCGAACGTTCGAAGTGTTTAAGCTATACCTAAACAGAGAAAAAGACCTTT
ACACCGGAAACTCATATATCCGAAAATGTCTTCTGTACGATAATCAGCAC
CAATGCGTCGATGCTGAATTTGTCAAAGATCTTGAGTTGTTGACCCGCTT
AGAGATCTGGGGCTGGAACTGGTTGGGTGATGAGTACAACCCCTTTCTTC
ACTTGTTTCCAAACCTCCGTGTGTTATTCGTTCGGCCAGTGCGTCATGTT
GACGCGGATGAGATCAGTATCACTTTAACTGACTTCCCATTGTTACGGAG
GCTGAAGATTGACTTGCATCAAAGCGGAAAGGTTCACATGTATTGTGCGT
TTGGTAGTAATCAATGTCTCACTCATTCGGAAGGGTTGAAAGAAATGGAA
ATTCGGTTTCCACCAAATGGTGATGTAAAGTATCCTTTCAAATTAATTGG
CAAATGGAGCCTGCCCAAGCAAATACATGATTTGAGATTGTTGACATATA
ATACTTTCTTGGCAGGTTGGCATAACGGATTCGGAAAATCAGCGGCGAAC
GTTCGAAGTGTTTAAGCTATACCTAAACAGAGAAAAAGACCTTTACACCG
GAAACTCATATATCCGAAAATGTCTTCTGTACGATAATCAGCACCAATGC
GTCGATGCTGAATTTGTCAAAGATCTTGAGTTGTTGACCCGCTTAGAGAT
CTGGGGCTGGAACTGGTTGGGTGATGAGTACAACCCCTTTCTTCACTTGT
TTCCAAACCTCCGTGTGTTATTCGTTCGGCCAGTGCGTCATGTTGACGCG
GATGAGATCAGTATCACTTTAACTGACTTCCCATTGTTACGGAGGCTGAA
GATTGACTTGCATCAAAGCGGAAAGGTTCACATGTATTGTGCGTTTGGTA
GTAATCAATGTCTCACTCATTCGGAAGGGTTGAAAGAAATGGAAATTCGG
TTTCCACCAAATGGTGATGTAAAGTATCCTTTCAAATTAATTGGCAAATG
GAGCCTGCCCAAGCAAATACATGATTTGAGATTGTTGACAAAAACCACTT
CCAATGGTGATGGTTTCGGATTCAAGAGACAAAACATGAGACATGTCACA
CCTGCAATTAAGGTTCAACAAACTAAAGCAGCCAAGAAAAACACTCAGGC
AAACAATGGAAGAGAAATTCACCCGATTTTTGATCGAACAGAGTTCGGGA
ACGTTGAAATCAGTCTATTTTCTATGTCAATGGCAGGCTTGACCTTAGGG
GATTTCAAGTTACCATACGTCAAGGGTAAATTTAAGATCTCCGCTGACGA
TGATATAACGGAGGCTGTTGGAAAGCAGCTAATTAAGATGGAGGTGGAAT
ATGTGGCAGATATCCCGACTCCTTTGTATCCAATAATGATTTACTTCGTT
TATATGCAGAAGAACTTTGAAAAGTTCCAATTCATGAGCTGTCATTACGC
CAATACTTTATTGAAGAATATGAAAGTGGAAACCATCCTGTCACTGAAAA
AGATGATTGTACGTGGTTTCCACATGAAGTTGTCAGAGGTGATTAAGCTA
GCAAAAGGTGATGTGAATTACAAACGAGTGAATGAAATCAGAGTGTTTGT
GTATAGTCTTGATGTTGATCAAAAACCACTTCCAATGGTGATGGTTTCGG
ATTCAAGAGACAAAACATGAGACATGTCACACCTGCAATTAAGGTTCAAC
AAACTAAAGCAGCCAAGAAAAACACTCAGGCAAACAATGGAAGAGAAATT
CACCCGATTTTTGATCGAACAGAGTTCGGGAACGTTGAAATCAGTCTATT
TTCTATGTCAATGGCAGGCTTGACCTTAGGGGATTTCAAGTTACCATACG
TCAAGGGTAAATTTAAGATCTCCGCTGACGATGATATAACGGAGGCTGTT
GGAAAGCAGCTAATTAAGATGGAGGTGGAATATGTGGCAGATATCCCGAC
TCCTTTGTATCCAATAATGATTTACTTCGTTTATATGCAGAAGAACTTTG
AAAAGTTCCAATTCATGAGCTGTCATTACGCCAATACTTTATTGAAGAAT
ATGAAAGTGGAAACCATCCTGTCACTGAAAAAGATGATTGTACGTGGTTT
CCACATGAAGTTGTCAGAGGTGATTAAGCTAGCAAAAGGTGATGTGAATT
ACAAACGAGTGAATGAAATCAGAGTGTTTGTGTATAGTCTTGATGTTGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:1451461..1452618 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1252-1500:910 |
| Aaloc | 1171-1248:832 |
| Aaloc | 910-1161:580 |
| Aaloc | 652-906:289 |
| Aaloc | 508-648:148 |
| Aaloc | 364-507:1 |
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