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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000279_pilon:159834..161661+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_021102 ID=XLOC_021102|Name=XLOC_021102|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1828bp|location=Sequence derived from alignment at sc0000279_pilon:159834..161661+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGATCGTTTTTTGGAGGCAAAAAGACTTACGATTTAAATGGAGGCAA
GTGGATATCAATCAATATTTCGAAAAGTACCAGTCAAATCTCTTTGAAAT
TTATGAATAGTAAGCCTATATACCTCTCATAAAACATACTGAAATTTCTA
TTCAAAAGTCCTACCAGAAACTTCGTTACAACAAAAAATCTGCTTGCCTC
CagctaatgttatggtctttttgCCTCCAAAAATCGGACggaaagtcacg
tgactaaacaAATGACGTTTCACGAAACCCGTCTATAGCGTCACTATTTT
AATCgtaaagttttcccgggcctaatcctcTTCATCCCGTCTCGTAATCT
TAAAaataatatactgttcttttgaAAGGACTAATAATGGCTGTGCCCTA
AAAGATGTCATGGGATCCCAGGCTTAGCCCCCTACTATATGCAAACAAAT
GTGGATTATAGAAAGGCTGAAttgcttttttcgaaattttttctttgccc
aaattcattttacactattttgagtctaaaaagtttgaaatttgtgTGGT
TAGGGGGATATAGTATGTATgcgcatttttttcaaatgacgtTTTTTAAA
CAATACATAGACAAAAATGCCTCTGGAGTTGAATTTTTGAATGCCCCTgt
ggaatttatttatttcagtttatttttgaGTTGGGGGCTAAAGAATATGG
GAAATAAAAATGCAATGctaatttaaacatttttagatGACAGTAAATAT
CATGCACTTATTTTACCTTAGATTCTAAACCGTTTTGTGGTAAAGATGAG
AGTTTTGAGATGCCATGTGAAGTAAAGAATAGTGAAAGAGCTGGTACAGA
TgatgaaagcaaaaaagaacaaacaaaaagaaaagctaGCAGTGCACCGA
CTGGTTCACCAAAGAaagccaaattgttttgctcgggAACAGCATACCAA
CCCAAAGCTCCTGCAAATGCGATAGGTATTGTTTTTGGTTAAGAATTAta
ctaatttttaaatttctggcTGTCAAAATGTTAActagaaaatttgaaca
aatattttgacGCCCTCACCAAATTTCTGAAAGAACCTAATCTAGACTTA
TGGTATCATTAAGTTGGTACTAATTTTTAtagaactaatttttgtggtaa
ctaaatattgtgattttgggtgtctaccgcgcagtttttaattgaaatct
ataaaaacccctaggaaaatgaaagaatttcagATATGTCAACAGCAAAA
TTTGttctgccaaattaagttttgacccctctagaaactgaGCAATCTGG
TTTGGTGAATGTagaaatttctgtttttttgtttaaacaaattgaccaat
ttcttttttccttatTCAAGATTTTGCTGGCTTCATTGCATGTGTGTCAC
CCGTACGGTTATCCTATCAATCGAAGAAGGAGCACTTTaatgtgttcatc
aaaaccaaaCCAACTTCATTTGCAAAAATCACAGTGTCAAGcacaaacaa
acaattttccgCAATACGTCAAAACTTTCTCGATTATTTTCACAACAAGG
AGCCCGTCACAATCAAGTCATGCTTGCCCTTGAATggtagaaactttttc
aatgcataTTCCTTTGTACAACCTTGTGAAAGGCAGTTAACTTTTAACTT
AAATGATGCGGATGCTACACCATTAAACGAGATCGAATCAAATTCAATCA
CTGAGTCCATAGTTGGTAAACTCAGGTTCCGTGGCCCTGTTCAAGTGAAG
CCCTATACCACTAGGGGTGGCAAGGCAAGAACGGACAAGATGCGGGAATG
TGTTATCTCCGATGGATCCACCTGCCTT Coding sequence (CDS) from alignment at sc0000279_pilon:159834..161661+ >XLOC_021102 ID=XLOC_021102|Name=XLOC_021102|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1542bp|location=Sequence derived from alignment at sc0000279_pilon:159834..161661+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGATCGTTTTTTGGAGGCAAAAAGACTTACGATTTAAATGGAGGCAA
GTGGATATCAATCAATATTTCGAAAAGTACCAGTCAAATCTCTTTGAAAT
TTATGAATAATGCGATCGTTTTTTGGAGGCAAAAAGACTTACGATTTAAA
TGGAGGCAAGTGGATATCAATCAATATTTCGAAAAGTACCAGTCAAATCT
CTTTGAAATTTATGAATAATTCTAAACCGTTTTGTGGTAAAGATGAGAGT
TTTGAGATGCCATGTGAAGTAAAGAATAGTGAAAGAGCTGGTACAGATga
tgaaagcaaaaaagaacaaacaaaaagaaaagctaGCAGTGCACCGACTG
GTTCACCAAAGAaagccaaattgttttgctcgggAACAGCATACCAACCC
AAAGCTCCTGCAAATGCGATAGATTCTAAACCGTTTTGTGGTAAAGATGA
GAGTTTTGAGATGCCATGTGAAGTAAAGAATAGTGAAAGAGCTGGTACAG
ATgatgaaagcaaaaaagaacaaacaaaaagaaaagctaGCAGTGCACCG
ACTGGTTCACCAAAGAaagccaaattgttttgctcgggAACAGCATACCA
ACCCAAAGCTCCTGCAAATGCGATAGATTTTGCTGGCTTCATTGCATGTG
TGTCACCCGTACGGTTATCCTATCAATCGAAGAAGGAGCACTTTaatgtg
ttcatcaaaaccaaaCCAACTTCATTTGCAAAAATCACAGTGTCAAGcac
aaacaaacaattttccgCAATACGTCAAAACTTTCTCGATTATTTTCACA
ACAAGGAGCCCGTCACAATCAAGTCATGCTTGCCCTTGAATggtagaaac
tttttcaatgcataTTCCTTTGTACAACCTTGTGAAAGGCAGTTAACTTT
TAACTTAAATGATGCGGATGCTACACCATTAAACGAGATCGAATCAAATT
CAATCACTGAGTCCATAGTTGGTAAACTCAGGTTCCGTGGCCCTGTTCAA
GTGAAGCCCTATACCACTAGGGGTGGCAAGGCAAGAACGGACAAGATGCG
GGAATGTGTTATCTCCGATGGATCCACCTGCCTTATTTTGCTGGCTTCAT
TGCATGTGTGTCACCCGTACGGTTATCCTATCAATCGAAGAAGGAGCACT
TTaatgtgttcatcaaaaccaaaCCAACTTCATTTGCAAAAATCACAGTG
TCAAGcacaaacaaacaattttccgCAATACGTCAAAACTTTCTCGATTA
TTTTCACAACAAGGAGCCCGTCACAATCAAGTCATGCTTGCCCTTGAATg
gtagaaactttttcaatgcataTTCCTTTGTACAACCTTGTGAAAGGCAG
TTAACTTTTAACTTAAATGATGCGGATGCTACACCATTAAACGAGATCGA
ATCAAATTCAATCACTGAGTCCATAGTTGGTAAACTCAGGTTCCGTGGCC
CTGTTCAAGTGAAGCCCTATACCACTAGGGGTGGCAAGGCAAGAACGGAC
AAGATGCGGGAATGTGTTATCTCCGATGGATCCACCTGCCTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000279_pilon | genome | sc0000279_pilon:159834..161661 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 316-771:1373 |
| Aaloc | 112-312:774 |
| Aaloc | 1-108:1 |
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