XLOC_021000 (mRNA) -

Overview
NameXLOC_021000
Unique NameXLOC_021000
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000290_pilon:190935..191730-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021000 ID=XLOC_021000|Name=XLOC_021000|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=796bp|location=Sequence derived from alignment at sc0000290_pilon:190935..191730- (Clytia hemisphaerica_ch_hm2_pilon)
TCATCGATCACCCATTGTTCTGATCTGTTGTCGATCAACAACAGAATTGT GATCATTCTATCAATATCGTCTACTGTAACTCGAATACTAATCATGGCAG ACTATCACTCCAAAGCTACCCTACTACTGGAAAAGATCAAGTACACACTA AGAGTCGTGGACATATACCAAAGCTCAGAAGAAGAGCTCACCAACATTAT CAAGAAGCTGAGAAATGACCGTCTTACCTTACGACAATATCGATCAAACT TGTCTACCACCGATGATGAACATATTCAGCTCACTAACCATATTAACGAT TTCATCCCATCCATCAAAAAGTTCATCATCCCAGCCAGCAATTATTTTCG TTTATTGAACCAAGCTAGCAATAACATAGAACTTAACGCTATCGAGCAAA ACGTACAACAGACCTTGGACAAAATTGAAAAGGTTGTGTCAAAACTCAAT GAAACACTTACAAGAGATTTGAGTTCATTAAATGGTTCTCAAATTCTTAT TCTTAAATCTGAGGCACCAAAATTGTATCCTGAAATAAATGCAATGGAAG AACAATTGCTGAAAGTACCAACTACTGTCAATACATCACTTTTGCAACAT ATGGAGAATGTCAATAGAAAGTGTTTAGAACTTTACAAACTTGAACGTGC CTACCAAACCAAGTTGGCTGTGATAACCAAAACCAAGCCATTGCAACTAT TACCATCAATACCGGGGAACACTACCTCATTTGTTAATCGTGAACAAGAT AAAAAACAAACCATCAAACCTTCAGATGACACTCCAACTGAACTAG

Coding sequence (CDS) from alignment at sc0000290_pilon:190935..191730-

>XLOC_021000 ID=XLOC_021000|Name=XLOC_021000|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1592bp|location=Sequence derived from alignment at sc0000290_pilon:190935..191730- (Clytia hemisphaerica_ch_hm2_pilon)
TCATCGATCACCCATTGTTCTGATCTGTTGTCGATCAACAACAGAATTGT
GATCATTCTATCAATATCGTCTACTGTAACTCGAATACTAATCATGGCAG
ACTATCACTCCAAAGCTACCCTACTACTGGAAAAGATCAAGTACACACTA
AGAGTCGTGGACATATACCAAAGCTCAGAAGAAGAGCTCACCAACATTAT
CAAGAAGCTGAGAAATGACCGTCTTACCTTACGACAATATCGATCAAACT
TGTCTACCACCGATGATGAACATATTCAGCTCACTAACCATATTAACGAT
TTCATCCCATCCATCAAAAAGTTCATCATCCCAGCCAGCAATTATTTTCG
TTTATTGAACCAAGCTAGCAATAACATAGAACTTAACGCTATCGAGCAAA
ACGTACAACAGACCTTGGACAAAATTGAAAAGGTTGTGTCAAAACTCAAT
GAAACACTTACAAGAGATTTGAGTTCATTAAATGGTTCTCAAATTCTTAT
TCTTAAATCTGAGGCACCAAAATTGTATCCTGAAATAAATGCAATGGAAG
AACAATTGCTGAAAGTACCAACTACTGTCAATACATCACTTTTGCAACAT
ATGGAGAATGTCAATAGAAAGTGTTTAGAACTTTACAAACTTGAACGTGC
CTACCAAACCAAGTTGGCTGTGATAACCAAAACCAAGCCATTGCAACTAT
TACCATCAATACCGGGGAACACTACCTCATTTGTTAATCGTGAACAAGAT
AAAAAACAAACCATCAAACCTTCAGATGACACTCCAACTGAACTAGTCAT
CGATCACCCATTGTTCTGATCTGTTGTCGATCAACAACAGAATTGTGATC
ATTCTATCAATATCGTCTACTGTAACTCGAATACTAATCATGGCAGACTA
TCACTCCAAAGCTACCCTACTACTGGAAAAGATCAAGTACACACTAAGAG
TCGTGGACATATACCAAAGCTCAGAAGAAGAGCTCACCAACATTATCAAG
AAGCTGAGAAATGACCGTCTTACCTTACGACAATATCGATCAAACTTGTC
TACCACCGATGATGAACATATTCAGCTCACTAACCATATTAACGATTTCA
TCCCATCCATCAAAAAGTTCATCATCCCAGCCAGCAATTATTTTCGTTTA
TTGAACCAAGCTAGCAATAACATAGAACTTAACGCTATCGAGCAAAACGT
ACAACAGACCTTGGACAAAATTGAAAAGGTTGTGTCAAAACTCAATGAAA
CACTTACAAGAGATTTGAGTTCATTAAATGGTTCTCAAATTCTTATTCTT
AAATCTGAGGCACCAAAATTGTATCCTGAAATAAATGCAATGGAAGAACA
ATTGCTGAAAGTACCAACTACTGTCAATACATCACTTTTGCAACATATGG
AGAATGTCAATAGAAAGTGTTTAGAACTTTACAAACTTGAACGTGCCTAC
CAAACCAAGTTGGCTGTGATAACCAAAACCAAGCCATTGCAACTATTACC
ATCAATACCGGGGAACACTACCTCATTTGTTAATCGTGAACAAGATAAAA
AACAAACCATCAAACCTTCAGATGACACTCCAACTGAACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_021000XLOC_021000-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000290_pilongenomesc0000290_pilon:190935..191730 -
Properties
Property NameValue
Aaloc679-795:118
Aaloc1-678:797