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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000539_pilon:76816..78503- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020900 ID=XLOC_020900|Name=XLOC_020900|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1688bp|location=Sequence derived from alignment at sc0000539_pilon:76816..78503- (Clytia hemisphaerica_ch_hm2_pilon)
GAAACTGAAAATAATGAGACATTCGGAAACTTTTCAACCACTGACAATGA
TGTATCCAAGAATCAAGATGAACCAAAAACCAACATATTTAAATCACCTG
CAATTGGTCATTCTGATACAGAAACTAAACCAGATCTTGAGAAAGACACA
TCAAGTTCACACATAGAAATAGTTGAAAATGATGATAAGTCAGAAAGTGC
TCTTGATGATTCAAATAATGTCCAATTGCAAGATGGGAAAATATGTGATT
CTCAAAATGATCAAAATGATTTTGGTGAATTTGGATCTTTTGACAATGCT
GAACAAGATTCAGATAAAGTTGAAAATGACTTGGATGCATCAGCATCTGT
TACAGACTTGAATGATTTAGGACAATCTGAGAAAACCACTGATAACATCA
TCAATAAGACAATAGATGATTGCCAACAATTGGAGAATGAAAAATCAAGA
TCTGAAACTGATTTTGGGGATTTTGATAATTTTCAAAACGATAGCAGAGA
TCTCAACCAAGAGACATCAGAGAATGTTAATGACAATCCAGTATCCATTA
CTGGTGACTTTGGTAATTTTGATTCATTTGGAAAGTAAAGATGCGGCATC
AAAATTTGATGATTTTGATAATGTCAATAGTAGCACTGAAAAACAAGAGA
TTTCTTCAAATGATTTCGAATTAACACCAGAACTTACAGCTAATGAGGAA
TCTGATGAATTTGGTGCTTTTGATGTATTTGGTAGTAAAACAAATATCGA
AAGTGAAGTTAAAACTGATTCTGAATTTACCCATTCTAAACTAAGTGCAT
CTGAAGACTTTGGATGGTTTTGGGACATTTGATAACAACACACATCAACC
GATCTTGGATGAGATGGAAGATTCAGCTTCAAACGATTTCGGTGATTTTG
ATGCATTTGATAGTACAGGCACATCTGCAGCTAAACAAGATTCCAAAACA
AAAGACAATAACGATGTAGATTCCACATCCGATGATTTCGGTGATTTTGG
AGCATTTGATAGCGAAACCAAACCTTCAGATTCACCTGAATGCAAATCAA
ATCCAGAGTTAAAAGACAATAAAAATACAGATTCTGCATCTAATGATTTT
GGTGACTTTGGAGCATTTGACAATAATACAAATAGTGCAACTGAATTAAA
ATTCGAATCTGAATTCAAAAACAATGAAAATGCAGGTTTTGATGACTTTG
GCTCATTTGATAGTAATACAACGAATGCTATTGAAACCAAAACTTCAGAT
TCGGAAAAAGGCAATACAAATGCAGAATCTTCATCAAGCAATTTTGGTGA
CTTCGGAGCATTTGATAGCAATACAAATAATGCAACTGAATTAAAATCCG
AATCTGAATTTAAAAACAATGAAAATTCAGGTTTTGATGACTTTGGCGCA
TTTGATAGTAATACTACAAATAATGCTATTGAAACCAAAACTTCAGATTC
TGAAAAAGGCAATACAAATGCAGAATCGTCATCAAGCGAATTTGGTGACT
TCGGAGCATTTGACAGCAATACTTGTGCCACAAAAGAAACAAAATTTGGG
GATTTCGGGACTGCGGAACAAGAGATGGAAAGTGTAAATGGATTTGCTGA
TTTCGGTGGTTTTGCTGAATCAAAACCTACCAACGACTTTGGTAATTTTG
GAAACTTTGAAGATCAGTCAGGGAAAAGCACCAAAAAG Coding sequence (CDS) from alignment at sc0000539_pilon:76816..78503- >XLOC_020900 ID=XLOC_020900|Name=XLOC_020900|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3376bp|location=Sequence derived from alignment at sc0000539_pilon:76816..78503- (Clytia hemisphaerica_ch_hm2_pilon)
GAAACTGAAAATAATGAGACATTCGGAAACTTTTCAACCACTGACAATGA
TGTATCCAAGAATCAAGATGAACCAAAAACCAACATATTTAAATCACCTG
CAATTGGTCATTCTGATACAGAAACTAAACCAGATCTTGAGAAAGACACA
TCAAGTTCACACATAGAAATAGTTGAAAATGATGATAAGTCAGAAAGTGC
TCTTGATGATTCAAATAATGTCCAATTGCAAGATGGGAAAATATGTGATT
CTCAAAATGATCAAAATGATTTTGGTGAATTTGGATCTTTTGACAATGCT
GAACAAGATTCAGATAAAGTTGAAAATGACTTGGATGCATCAGCATCTGT
TACAGACTTGAATGATTTAGGACAATCTGAGAAAACCACTGATAACATCA
TCAATAAGACAATAGATGATTGCCAACAATTGGAGAATGAAAAATCAAGA
TCTGAAACTGATTTTGGGGATTTTGATAATTTTCAAAACGATAGCAGAGA
TCTCAACCAAGAGACATCAGAGAATGTTAATGACAATCCAGTATCCATTA
CTGGTGACTTTGGTAATTTTGATTCATTTGGAAAGTAAAGATGCGGCATC
AAAATTTGATGATTTTGATAATGTCAATAGTAGCACTGAAAAACAAGAGA
TTTCTTCAAATGATTTCGAATTAACACCAGAACTTACAGCTAATGAGGAA
TCTGATGAATTTGGTGCTTTTGATGTATTTGGTAGTAAAACAAATATCGA
AAGTGAAGTTAAAACTGATTCTGAATTTACCCATTCTAAACTAAGTGCAT
CTGAAGACTTTGGATGGTTTTGGGACATTTGATAACAACACACATCAACC
GATCTTGGATGAGATGGAAGATTCAGCTTCAAACGATTTCGGTGATTTTG
ATGCATTTGATAGTACAGGCACATCTGCAGCTAAACAAGATTCCAAAACA
AAAGACAATAACGATGTAGATTCCACATCCGATGATTTCGGTGATTTTGG
AGCATTTGATAGCGAAACCAAACCTTCAGATTCACCTGAATGCAAATCAA
ATCCAGAGTTAAAAGACAATAAAAATACAGATTCTGCATCTAATGATTTT
GGTGACTTTGGAGCATTTGACAATAATACAAATAGTGCAACTGAATTAAA
ATTCGAATCTGAATTCAAAAACAATGAAAATGCAGGTTTTGATGACTTTG
GCTCATTTGATAGTAATACAACGAATGCTATTGAAACCAAAACTTCAGAT
TCGGAAAAAGGCAATACAAATGCAGAATCTTCATCAAGCAATTTTGGTGA
CTTCGGAGCATTTGATAGCAATACAAATAATGCAACTGAATTAAAATCCG
AATCTGAATTTAAAAACAATGAAAATTCAGGTTTTGATGACTTTGGCGCA
TTTGATAGTAATACTACAAATAATGCTATTGAAACCAAAACTTCAGATTC
TGAAAAAGGCAATACAAATGCAGAATCGTCATCAAGCGAATTTGGTGACT
TCGGAGCATTTGACAGCAATACTTGTGCCACAAAAGAAACAAAATTTGGG
GATTTCGGGACTGCGGAACAAGAGATGGAAAGTGTAAATGGATTTGCTGA
TTTCGGTGGTTTTGCTGAATCAAAACCTACCAACGACTTTGGTAATTTTG
GAAACTTTGAAGATCAGTCAGGGAAAAGCACCAAAAAGGAAACTGAAAAT
AATGAGACATTCGGAAACTTTTCAACCACTGACAATGATGTATCCAAGAA
TCAAGATGAACCAAAAACCAACATATTTAAATCACCTGCAATTGGTCATT
CTGATACAGAAACTAAACCAGATCTTGAGAAAGACACATCAAGTTCACAC
ATAGAAATAGTTGAAAATGATGATAAGTCAGAAAGTGCTCTTGATGATTC
AAATAATGTCCAATTGCAAGATGGGAAAATATGTGATTCTCAAAATGATC
AAAATGATTTTGGTGAATTTGGATCTTTTGACAATGCTGAACAAGATTCA
GATAAAGTTGAAAATGACTTGGATGCATCAGCATCTGTTACAGACTTGAA
TGATTTAGGACAATCTGAGAAAACCACTGATAACATCATCAATAAGACAA
TAGATGATTGCCAACAATTGGAGAATGAAAAATCAAGATCTGAAACTGAT
TTTGGGGATTTTGATAATTTTCAAAACGATAGCAGAGATCTCAACCAAGA
GACATCAGAGAATGTTAATGACAATCCAGTATCCATTACTGGTGACTTTG
GTAATTTTGATTCATTTGGAAAGTAAAGATGCGGCATCAAAATTTGATGA
TTTTGATAATGTCAATAGTAGCACTGAAAAACAAGAGATTTCTTCAAATG
ATTTCGAATTAACACCAGAACTTACAGCTAATGAGGAATCTGATGAATTT
GGTGCTTTTGATGTATTTGGTAGTAAAACAAATATCGAAAGTGAAGTTAA
AACTGATTCTGAATTTACCCATTCTAAACTAAGTGCATCTGAAGACTTTG
GATGGTTTTGGGACATTTGATAACAACACACATCAACCGATCTTGGATGA
GATGGAAGATTCAGCTTCAAACGATTTCGGTGATTTTGATGCATTTGATA
GTACAGGCACATCTGCAGCTAAACAAGATTCCAAAACAAAAGACAATAAC
GATGTAGATTCCACATCCGATGATTTCGGTGATTTTGGAGCATTTGATAG
CGAAACCAAACCTTCAGATTCACCTGAATGCAAATCAAATCCAGAGTTAA
AAGACAATAAAAATACAGATTCTGCATCTAATGATTTTGGTGACTTTGGA
GCATTTGACAATAATACAAATAGTGCAACTGAATTAAAATTCGAATCTGA
ATTCAAAAACAATGAAAATGCAGGTTTTGATGACTTTGGCTCATTTGATA
GTAATACAACGAATGCTATTGAAACCAAAACTTCAGATTCGGAAAAAGGC
AATACAAATGCAGAATCTTCATCAAGCAATTTTGGTGACTTCGGAGCATT
TGATAGCAATACAAATAATGCAACTGAATTAAAATCCGAATCTGAATTTA
AAAACAATGAAAATTCAGGTTTTGATGACTTTGGCGCATTTGATAGTAAT
ACTACAAATAATGCTATTGAAACCAAAACTTCAGATTCTGAAAAAGGCAA
TACAAATGCAGAATCGTCATCAAGCGAATTTGGTGACTTCGGAGCATTTG
ACAGCAATACTTGTGCCACAAAAGAAACAAAATTTGGGGATTTCGGGACT
GCGGAACAAGAGATGGAAAGTGTAAATGGATTTGCTGATTTCGGTGGTTT
TGCTGAATCAAAACCTACCAACGACTTTGGTAATTTTGGAAACTTTGAAG
ATCAGTCAGGGAAAAGCACCAAAAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000539_pilon | genome | sc0000539_pilon:76816..78503 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 814-1686:874 |
| Aaloc | 580-813:1109 |
| Aaloc | 1-579:1689 |
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