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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000340_pilon:348182..349575- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020691 ID=XLOC_020691|Name=XLOC_020691|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1394bp|location=Sequence derived from alignment at sc0000340_pilon:348182..349575- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGCAATGGAAAAGAAGTCATTGTTCATGCCTGCAGACATCGATGA
AAAAAAGATACAACCTCTCGCATTAGGGGACAGCTTTGGGTGGTATCCTA
AACAAGGCTTTTATGGCTCTGGTAAATACTATCTGTGGCTTCAAGATTAT
TACAAAAATAATGATGGTATTATAGTTGTACATATCATCGACTTCAATAA
AGAGGAATTGAAGTATGAACGAAAGAAACTGAGAATCAAAATTCCGGAAA
CAGAAGGCAGTTCGAAAAGAAATTCAGAGCTTGATTTTATGAGTGGAAAG
CTAGTGCATACTGTAGAACGCGCTTTAAAAAAAAAAGGAAAAAAAGAACT
TGTTTTAGAGATTTATTACATCAACATGGTCGATTTTATCAATATGGATG
ATTTCGATGAGATAACAATCCAGAAGAAGAAGTCTGACCTTAGAATTATC
TACGATTCGGAGCAATACAATGAACTTGTGTTTAATTTATACAATCATCA
CTGTCAGAAAGAAACATTGGTACTTTCATGTCAAGCCTTTCAGGCGGAAG
AGCGTGAGAATCATCAAATAATCGTGTCAAATCAAGTTTGTTTGGATTTT
GTTCACATAACCAGTAATAAATTATTGCTTAATAAACGAGTCATTGTCAA
CTTGAAGGCTACACCTGGATTTTTGGATTATGTATCTGTACCACATGTGC
ATTGCAATGGTGACCGTATCCTATTCTACCAAGAAACAGAAGATGGTGAA
AAAGAGATCTTATCCATTCAAGAATTTGACTGTGATGGTAAATTCATGTA
TTCATACTCAACACGGTACAGTGGAGTTAATAGTGTTTTTGAAACTTCGC
CGTGTCAATTCAAGACAGACTTAAGTCCATTTTTTCAAAAATGGACTTAA
GACCATAACCCCCTATTTTAGCATGCGCACTTTCCAAAAACGGCCTTAAG
TCCACAGAATTCTAATGGGAAAGAGGTGTATTTTGCAATTCAAAAAAAAT
AAGAATTTAGAAAGTTCCATAATATATCAACCATAAACAGCCTTAAGTCC
TAAATTAAAGTGCAAATTTTATTTTCTATGAAGCATTGACATAAAATGTG
TAGCCTTAAGTCCAACACATCTCAACCTTTAAAGTCAATTATCTCAAAAT
GGAAAAAATGGACTTAAGGCTGTCTTGAATTGACACGGCGACTTATGGAA
GATATTTGTTTCTTTATGAAGGCATGAAGTCTGATGTTAGAAAAAATCGG
GTTCGTTTTGTTGAATTAAAAGATGGGGAAATGAAGTTAGTTGATAGTGA
TCGCATTTTCTTTGGGGAACCATGGCGTGGTCTCTCCTACAGATTGAAGA
CTTCTTTTAGAAGGCTTGATCGTAGGCTTCTACCAACTTACACC Coding sequence (CDS) from alignment at sc0000340_pilon:348182..349575- >XLOC_020691 ID=XLOC_020691|Name=XLOC_020691|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1920bp|location=Sequence derived from alignment at sc0000340_pilon:348182..349575- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGCAATGGAAAAGAAGTCATTGTTCATGCCTGCAGACATCGATGA
AAAAAAGATACAACCTCTCGCATTAGGGGACAGCTTTGGGTGGTATCCTA
AACAAGGCTTTTATGGCTCTGGTAAATACTATCTGTGGCTTCAAGATTAT
TACAAAAATAATGATGGTATTATAGTTGTACATATCATCGACTTCAATAA
AGAGGAATTGAAGTATGAACGAAAGAAACTGAGAATCAAAATTCCGGAAA
CAGAAGGCAGTTCGAAAAGAAATTCAGAGCTTGATTTTATGAGTGGAAAG
CTAGTGCATACTGTAGAACGCGCTTTAAAAAAAAAAGGAAAAAAAGAACT
TGTTTTAGAGATTTATTACATCAACATGGTCGATTTTATCAATATGGATG
ATTTCGATGAGATAACAATCCAGAAGAAGAAGTCTGACCTTAGAATTATC
TACGATTCGGAGCAATACAATGAACTTGTGTTTAATTTATACAATCATCA
CTGTCAGAAAGAAACATTGGTACTTTCATGTCAAGCCTTTCAGGCGGAAG
AGCGTGAGAATCATCAAATAATCGTGTCAAATCAAGTTTGTTTGGATTTT
GTTCACATAACCAGTAATAAATTATTGCTTAATAAACGAGTCATTGTCAA
CTTGAAGGCTACACCTGGATTTTTGGATTATGTATCTGTACCACATGTGC
ATTGCAATGGTGACCGTATCCTATTCTACCAAGAAACAGAAGATGGTGAA
AAAGAGATCTTATCCATTCAAGAATTTGACTGTGATGATGGCTGCAATGG
AAAAGAAGTCATTGTTCATGCCTGCAGACATCGATGAAAAAAAGATACAA
CCTCTCGCATTAGGGGACAGCTTTGGGTGGTATCCTAAACAAGGCTTTTA
TGGCTCTGGTAAATACTATCTGTGGCTTCAAGATTATTACAAAAATAATG
ATGGTATTATAGTTGTACATATCATCGACTTCAATAAAGAGGAATTGAAG
TATGAACGAAAGAAACTGAGAATCAAAATTCCGGAAACAGAAGGCAGTTC
GAAAAGAAATTCAGAGCTTGATTTTATGAGTGGAAAGCTAGTGCATACTG
TAGAACGCGCTTTAAAAAAAAAAGGAAAAAAAGAACTTGTTTTAGAGATT
TATTACATCAACATGGTCGATTTTATCAATATGGATGATTTCGATGAGAT
AACAATCCAGAAGAAGAAGTCTGACCTTAGAATTATCTACGATTCGGAGC
AATACAATGAACTTGTGTTTAATTTATACAATCATCACTGTCAGAAAGAA
ACATTGGTACTTTCATGTCAAGCCTTTCAGGCGGAAGAGCGTGAGAATCA
TCAAATAATCGTGTCAAATCAAGTTTGTTTGGATTTTGTTCACATAACCA
GTAATAAATTATTGCTTAATAAACGAGTCATTGTCAACTTGAAGGCTACA
CCTGGATTTTTGGATTATGTATCTGTACCACATGTGCATTGCAATGGTGA
CCGTATCCTATTCTACCAAGAAACAGAAGATGGTGAAAAAGAGATCTTAT
CCATTCAAGAATTTGACTGTGATGGCATGAAGTCTGATGTTAGAAAAAAT
CGGGTTCGTTTTGTTGAATTAAAAGATGGGGAAATGAAGTTAGTTGATAG
TGATCGCATTTTCTTTGGGGAACCATGGCGTGGTCTCTCCTACAGATTGA
AGACTTCTTTTAGAAGGCTTGATCGTAGGCTTCTACCAACTTACACCGCA
TGAAGTCTGATGTTAGAAAAAATCGGGTTCGTTTTGTTGAATTAAAAGAT
GGGGAAATGAAGTTAGTTGATAGTGATCGCATTTTCTTTGGGGAACCATG
GCGTGGTCTCTCCTACAGATTGAAGACTTCTTTTAGAAGGCTTGATCGTA
GGCTTCTACCAACTTACACC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000340_pilon | genome | sc0000340_pilon:348182..349575 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 790-960:172 |
| Aaloc | 1-786:1395 |
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