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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000327_pilon:16241..18040+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020657 ID=XLOC_020657|Name=XLOC_020657|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1800bp|location=Sequence derived from alignment at sc0000327_pilon:16241..18040+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACATTACCAGCTTGATCCGGCTCATTTTTGCTCTGCGCCTGGTTT
GTCTTGGCAAGCAGCACTAAAAATGACAAAGGCTAAACTCCAGTTGTTGT
GCGATATTGATATGCATTTGTTTATCGAGGATGGTATTCGAGGTGGTATA
TGCATGATTACTGAAAGGTACATTTAAttctttttgtatttgttttgtat
aaaaactttctAAGGgcgttttgaaaacattaaatcacTTATCTTTTAGG
TTTGCGAAAGCCAATCATGAACATTCTGTATCCTACAATCCAAATCTTCC
AAAGCAATACTTAATCTATGTTGACGCTAATAATTTGTACGGCTTGGCAA
TGAGTCAACCATTACCAATTTCAAACTTTCGCTGGCTGTTTCAAGAGGAA
ATCAGACGTTTCAACGTGttggatattgaaaatgatAGTGAATATGGATA
CATGCTAGAAGTGGATTTAGGTATGTTGATTGAATGAAATATATTGTTAC
ATctgatctttgaaaaaattaatattcTATTAATACTattcttttttgac
tttttctttttttactttagatTATCCAGATTATCTTCATGATGCTCATA
GAGATTACCCACTTGCCCCTGAAAAGTTATATGTCAAGCCGAACATGCTT
TCGGGAGTTCAACTGGAAATTTTAGGAGTCGATTCTGCTGATGAAGTTCA
ATCATccaaacaaatcaaattggtaCCTAATTTGTATAATAAGAAGAATT
ATATCCTTCATTATTGGAATCTGAAATTTTACATAAATCATGGGATGAAG
CTAATGAAAATTCATCGTATATTAAAGTTTAAACAAGAACCTTGGTTAAA
AAGCTACATTGATTTCAATACTGAAAGACGTGCAAATGCAAGAAACAGTT
TCGAAAAGGAGTTTTTCAAGCTGATGAATAATAGCTGTTTTGGAAAAACG
ATGGAAAATCTTAGAAAGCGTCGAAGGATCGAGTTGATTACATCACGTGC
GATACTAAGAAAAAGGGTTGCTCAACCGTCTTTTCATGATTTTCACATCA
TCAACGAAGATCTCGTTGTGgttgaaagaaagaaaacgtCTCTTCTTCTC
AATCGACCTATTTACACTGGTCTTGCTGTTTTGGATATTTCAAAGGTATG
TCGTTTTTGCTTAATGGATttgaataatattttgattttctcaatcATCG
TAAAATAAAGTATCTAATAATCTTTCTTTCAATTACCTTTAGCTGCACAT
GTATCAATTTCATTATGATCACATCAAACGCTTATATCCAGAACGAAAAT
CAAGGCTGCTCTTCACAGATACGGACTCGTTAGCGTATGCAATAAATACA
GACGATATTTATGaagatatgaaaaataatgttGATTTATATGACTTTAG
TAATTATCCGGAAGATCATAAGTGTTATTCTGCTGCTAATAGACTAGTCA
TTGGAAAATTTAAAGATGAATTAGGTTCTTTGAATATGGAAGAATTCGTC
GGTCTTAGATCAAAAATGTATTCGTTTACATACAAAATGGAAGATAAAAT
GAAAGAGATTAAGAAAGCAAAGGGTGTCAAGAAAAGTGTAGTAAAACGAA
AAATCTCACATATGGATTATGTTAAAACATTATTTGAAGATGAGGATCAA
TATAGAGAATGGAACTCATTTAGATCATATAAACATCGTATCTATACAat
aaaagtgaataaaaaatcGCTCTCATGTTTCGATGACAAACGCTATATTC
TGGGTGATGGAATTACAACCCTTCCTCATGgacataaaaatttaatttaa
Coding sequence (CDS) from alignment at sc0000327_pilon:16241..18040+ >XLOC_020657 ID=XLOC_020657|Name=XLOC_020657|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3042bp|location=Sequence derived from alignment at sc0000327_pilon:16241..18040+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACATTACCAGCTTGATCCGGCTCATTTTTGCTCTGCGCCTGGTTT
GTCTTGGCAAGCAGCACTAAAAATGACAAAGGCTAAACTCCAGTTGTTGT
GCGATATTGATATGCATTTGTTTATCGAGGATGGTATTCGAGGTGGTATA
TGCATGATTACTGAAAGATGTTACATTACCAGCTTGATCCGGCTCATTTT
TGCTCTGCGCCTGGTTTGTCTTGGCAAGCAGCACTAAAAATGACAAAGGC
TAAACTCCAGTTGTTGTGCGATATTGATATGCATTTGTTTATCGAGGATG
GTATTCGAGGTGGTATATGCATGATTACTGAAAGGTTTGCGAAAGCCAAT
CATGAACATTCTGTATCCTACAATCCAAATCTTCCAAAGCAATACTTAAT
CTATGTTGACGCTAATAATTTGTACGGCTTGGCAATGAGTCAACCATTAC
CAATTTCAAACTTTCGCTGGCTGTTTCAAGAGGAAATCAGACGTTTCAAC
GTGttggatattgaaaatgatAGTGAATATGGATACATGCTAGAAGTGGA
TTTAGGTTTGCGAAAGCCAATCATGAACATTCTGTATCCTACAATCCAAA
TCTTCCAAAGCAATACTTAATCTATGTTGACGCTAATAATTTGTACGGCT
TGGCAATGAGTCAACCATTACCAATTTCAAACTTTCGCTGGCTGTTTCAA
GAGGAAATCAGACGTTTCAACGTGttggatattgaaaatgatAGTGAATA
TGGATACATGCTAGAAGTGGATTTAGatTATCCAGATTATCTTCATGATG
CTCATAGAGATTACCCACTTGCCCCTGAAAAGTTATATGTCAAGCCGAAC
ATGCTTTCGGGAGTTCAACTGGAAATTTTAGGAGTCGATTCTGCTGATGA
AGTTCAATCATccaaacaaatcaaattggtaCCTAATTTGTATAATAAGA
AGAATTATATCCTTCATTATTGGAATCTGAAATTTTACATAAATCATGGG
ATGAAGCTAATGAAAATTCATCGTATATTAAAGTTTAAACAAGAACCTTG
GTTAAAAAGCTACATTGATTTCAATACTGAAAGACGTGCAAATGCAAGAA
ACAGTTTCGAAAAGGAGTTTTTCAAGCTGATGAATAATAGCTGTTTTGGA
AAAACGATGGAAAATCTTAGAAAGCGTCGAAGGATCGAGTTGATTACATC
ACGTGCGATACTAAGAAAAAGGGTTGCTCAACCGTCTTTTCATGATTTTC
ACATCATCAACGAAGATCTCGTTGTGgttgaaagaaagaaaacgtCTCTT
CTTCTCAATCGACCTATTTACACTGGTCTTGCTGTTTTGGATATTTCAAA
GatTATCCAGATTATCTTCATGATGCTCATAGAGATTACCCACTTGCCCC
TGAAAAGTTATATGTCAAGCCGAACATGCTTTCGGGAGTTCAACTGGAAA
TTTTAGGAGTCGATTCTGCTGATGAAGTTCAATCATccaaacaaatcaaa
ttggtaCCTAATTTGTATAATAAGAAGAATTATATCCTTCATTATTGGAA
TCTGAAATTTTACATAAATCATGGGATGAAGCTAATGAAAATTCATCGTA
TATTAAAGTTTAAACAAGAACCTTGGTTAAAAAGCTACATTGATTTCAAT
ACTGAAAGACGTGCAAATGCAAGAAACAGTTTCGAAAAGGAGTTTTTCAA
GCTGATGAATAATAGCTGTTTTGGAAAAACGATGGAAAATCTTAGAAAGC
GTCGAAGGATCGAGTTGATTACATCACGTGCGATACTAAGAAAAAGGGTT
GCTCAACCGTCTTTTCATGATTTTCACATCATCAACGAAGATCTCGTTGT
GgttgaaagaaagaaaacgtCTCTTCTTCTCAATCGACCTATTTACACTG
GTCTTGCTGTTTTGGATATTTCAAAGCTGCACATGTATCAATTTCATTAT
GATCACATCAAACGCTTATATCCAGAACGAAAATCAAGGCTGCTCTTCAC
AGATACGGACTCGTTAGCGTATGCAATAAATACAGACGATATTTATGaag
atatgaaaaataatgttGATTTATATGACTTTAGTAATTATCCGGAAGAT
CATAAGTGTTATTCTGCTGCTAATAGACTAGTCATTGGAAAATTTAAAGA
TGAATTAGGTTCTTTGAATATGGAAGAATTCGTCGGTCTTAGATCAAAAA
TGTATTCGTTTACATACAAAATGGAAGATAAAATGAAAGAGATTAAGAAA
GCAAAGGGTGTCAAGAAAAGTGTAGTAAAACGAAAAATCTCACATATGGA
TTATGTTAAAACATTATTTGAAGATGAGGATCAATATAGAGAATGGAACT
CATTTAGATCATATAAACATCGTATCTATACAataaaagtgaataaaaaa
tcGCTCTCATGTTTCGATGACAAACGCTATATTCTGGGTGATGGAATTAC
AACCCTTCCTCATGgacataaaaatttaatttaaCTGCACATGTATCAAT
TTCATTATGATCACATCAAACGCTTATATCCAGAACGAAAATCAAGGCTG
CTCTTCACAGATACGGACTCGTTAGCGTATGCAATAAATACAGACGATAT
TTATGaagatatgaaaaataatgttGATTTATATGACTTTAGTAATTATC
CGGAAGATCATAAGTGTTATTCTGCTGCTAATAGACTAGTCATTGGAAAA
TTTAAAGATGAATTAGGTTCTTTGAATATGGAAGAATTCGTCGGTCTTAG
ATCAAAAATGTATTCGTTTACATACAAAATGGAAGATAAAATGAAAGAGA
TTAAGAAAGCAAAGGGTGTCAAGAAAAGTGTAGTAAAACGAAAAATCTCA
CATATGGATTATGTTAAAACATTATTTGAAGATGAGGATCAATATAGAGA
ATGGAACTCATTTAGATCATATAAACATCGTATCTATACAataaaagtga
ataaaaaatcGCTCTCATGTTTCGATGACAAACGCTATATTCTGGGTGAT
GGAATTACAACCCTTCCTCATGgacataaaaatttaatttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000327_pilon | genome | sc0000327_pilon:16241..18040 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 964-1521:1243 |
| Aaloc | 391-963:573 |
| Aaloc | 169-387:251 |
| Aaloc | 1-165:1 |
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