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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1368854..1375794- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020454 ID=XLOC_020454|Name=XLOC_020454|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6941bp|location=Sequence derived from alignment at sc0000049_pilon:1368854..1375794- (Clytia hemisphaerica_ch_hm2_pilon)
GCCATACAACAACCATCTGGCGGAGCACCAGCAACCAATTCCATTTCAAT
CGTGAGAGAAGATAACTCCTCAAACCTATCACAAAATCAATTAATGGTGC
TGATTGACGACAGACTCACATCAACAATGTCTCGTTTCCTAACCAATAAC
GTCAACAGCCTTACTTCTGGTACGCCTGGAAATTCAGTTCCCCATCAACG
CTACCAATCTCAACAACAACAACAACTCGATCTACCATCTTTGCTGCGAC
AAAATCACAACAATCCCTCGGCGCCGGCAAATTTCCTTTCCCTCAACTCT
CAACAACAAGACGATCAAAATGGCCGCCCTCAAGAACTTTCGAATTTGCA
ACTACCTCCCGTCTCAGCCAATGTTATCAACAGGAGCAGACGTTGTGAGT
TCGTAAATTTTGATTCTTTGCTTCCTCAGAATGTAGGGCGAGCCACCAAC
ACCCATATTTCCCTGAGTTTTGATGGGGACAGTATTTCTTTGGCCAGCAA
CAATGACACCTCGACAAAAGACAATTCGAAGTACAAGCAAAAGTCACGGA
TTTTCTTACTTGGTCCCTAGCTTGGACTTTTTTCTTTCAAATCATGTTAC
AATTCAGAGCCCATTTGGCTGAGCAACTTTTACAATATCAACTCTATATT
ACAAACTTGGCGAATCAATACACCTTCTCAGCCTGGTATAACTATGACAA
AGCATTTCGTCAGTCCCTCGCCAACAACCCACAGAAAGTGACGTTGGGCT
CAACTGACGGATATATTTTTAATTTGTATGTAAGGGATCAAATTTTAAGA
GCTAAGTGTTTTACCTGTGGCTCCAGTGGCCATCTTTCTCCCTCCTGCCC
TGCAAAGGGCAAGAGTCCAGTAGCTCCTAGCACGAATAAGTTTCATTCGT
TTGGCAGTAGTCAGCAGAGTTTTCATAAGCCCCGGGCCCCTGGGTTCCCA
CCCACCCAACCAGGCTCTTTCGGATCAAATTCCCACAGTGTCTCATCCAA
TTTTCAGGCCCCCTCTCGTTTCTCTGTGCCTCCCCAACATGGTTCCAGGC
CACCGCCCTTTCCTGCCCCCCAGCGATCCCAGACTGCCGGCTATAGTGGC
CAAGTGTGCCGGGAATCGAACCAAGGGTTGTGTACTCGACCTTCCAATAA
CTGCAGATTTCTCCATGTCTGCATCTTCTGTGGGGCCAGTGACCACCCAG
GATTCCAGTGCCAGTGATTCTCTTTTACTAGATTCCTTTCCTTCACAGTC
TTCTCTACCCACTTCTGTTTCCTCGCCTGTAAATATATCAAATCTTGAGT
ATCTTTTGTCAGGGTACTCCCCTGATATTGTTGATTTTTTAATTCATGGT
TTTTCCCATGGGTTTCGTTTGGGCTTTGGAGATAGTCCCCTTTCTCACAC
TGGGAGGAACAATTCTTCTGCCATGATCGTAAGTGACAAAGTTTCAGCGT
CCATCATGAAAGAACTAGAGCGAGGTCACACCGCTGGCCCCTTTGCTACT
TCTCCCCTTCCTAATCTTCACTGTTCTCCTCTTGGATCTACACCTAAGAA
TGATGGTTCTTCTCGTATTATCCTTGATTTGTCTCAACCTAACGGCTGTT
CAGTGAATGATGGTATCCCTATAGAATCGTGCCACGTGAAATATTCTTCT
TTTGATGATGCTGTAGATTTAGTTCATCTCTTGGGTAGAGGTTGCTTCAT
GGGAAAGATTGACATAAAGCACGCATTCAGACTTTGTCCAGTACATCCGG
ATGATTGGTATCTACTTGGATATTACTGGAGATCTCGTTGGTATGTTGAT
TTGAGATTGCCATTTGGACTTAGATCTTCTCCTTTTATTTTCACTACCTT
TTCTGACGCACTTCAATGGATTTTAGTCGTCAAGTATAACATTACCGCTC
TTGTACATTACCTTGATGATTTTTTCGTTGTTGGCAGAACAAAGGAAGAG
TGTCAGTCTCGTATGGATCTTATGGTTCAGGTCTTCGACTTCTTAGGTGT
TCCTATAGCAAAGGACAAGTTTGAGGGCCCATCTCAGAGGATTGTGTTCT
TGGGGATTGAGATAGATTCTGTTGACTTTACCATCCGTCTACCTGCTGAC
TAGACTATGCTATAGTCTAAGACGAGTTTCATCTAAGAGGAACAAACGTG
AAGACGGGAATTTTTTACGGGAGTAGCTGTTGTCTTAGACTATATCAATT
CGGTAGAAAAGCGGAAATTTTGGATTTTGGTTAGCGGTGTGATCGGCCGG
CCCGGTTCGAACAAATGTAAACAAACAGTCGGGTCTGGCTGGTAATTGCC
GCCACCAATTCTTGCTGCTAATACAGATGGACCCGACTGAAAAATGTTTC
CAAAACATAGCGACAGAAAGTTAGTCTGTAGGTGTGGAAATTATTTGTGC
AATTCTTTAGCATTTTTTGAGTCTAGCCTCCTATTAGTTAGTACTTTATT
TTGTAACTTCTTTTCAACAAGGTGTTTTATGTAAATGGTTTGTTTTGAAT
TTATTTTTAACAAGCAGAACTCAGATTCAAGCAAGTATATATATATCATA
TTTTTTTCAAGAAAGCTATAAAAGAGAGAAGAAGAGGTAAAGCATTTTTC
TCTTTTATTTTTATTTTGAAAGACTCATCTTTTCGTAATACAAACTTGCA
TCTACCAGGTTTATCTACAGTGTATGTGGTATATGTTTTGTCTAATTGCT
CTAGGAAAATTTTATGAAGAGTGGTATTTTTCAAATCAAAAACAGCTTTT
TTACAAATTAATGCATTATTTTTCTTTATGATTTTTTTTTAAATTTTCAT
AAAAGGCATAATTGTTGGTTTTGATTTTTTGTCTACAGATATAGTTTAGG
CAAGCCAATATAATTTGTGGTTTTTTTACAGACCGCAAGCTTTAGGTAAA
TTAAATTTTAGGTTCGGTCGTGGTGTGCCTGTAATGTAAAACAACAAAAC
AAATCAAATTGGTCCCACCTTATAGTCTACCAAAACCAAGTCCAACACAG
GAAAAATTCAATATAAATCATTTTGCATGACTTTTTAGTGAATTCACGGT
GAAAAGCCGCAATTAATAATTCAAGATGAAAAGGTGAAATTTCACTGTGA
ATTTTCAAATTGCAGCTTTTCACTGTGAATTCACTAAAAAGTCAAGGTGA
ATTTTATTAATTTTTTTCCTGTGCCAAGTTGTCATATACTGATATAATTT
CGATAGCTATTAAAAATATGAAAGTTTCAAAATAATCTTGGTAGTTTCAA
AGACTTCAAAATAGTGAAAAATTATACAAGTAGGTGCTAAAACTTTTTAT
TTTTAGAAAGGTGTATATAAACCTTTCCAATGATGTTGACACCTCTGTAT
TCAATATGGGCATTTACTGTATATAAAAGGCATTATTTACAATTATCATA
TAATTGAATCATAATTGAATATTGAATATTTTAAATTTTGTTTTTTTTAT
AAAGAAAGTAAAAATGAAAGTCTTAGACACAATCCATATACCATGCAAAA
ATTCTCACTCTTTAAGAAAAAAAATTGAAAGGAATTTTTCAAGGGCAGAT
TTGTCATGCCAAAATCAATGTATTAAATTTCTTTCATATTTTTGGTTATC
TTTTTTAAAATTTTGAATAAATCAATTCATTTTTACGTGGGATTTTATGG
AATTGTCACTTGGATGATTTAAAATGATATTTGAGTAAAGAAATTTAAAA
CGTGGTTTTATTTGACTAGGTATTTTTTGCAAAACATCCGGTTCAGTCAA
AAATGCCTTCTCGGCCTCAGGTCTAAAATTGAAAATTTGAACCACAGATT
TTTTGGGGAATTTTTCCTTACAAATACATTTCAATCATCACAGTGACCCT
ATATTTCAAATCTAAAGTAGTTTTGATCATTGGTTCAGGAATTATGATAA
ATTTTTAGTTTTTTACAAAATTCAAACAAAATTTGTGTTTTCGCAGGATA
TGGTTGTAAAATTTTAGATGAAATTTGTAAACTACCGTGAGATCGGGGTA
ACTTAATACATCAGTGGAGGCTAACATGCATAACCCTTAAACGAGTGACC
TGGCTGGTCATTAAAATACAAAGTTAAATCAAAATAAAAAATTATAGAGT
AGAGGTGCGAGCGGAGCTGCGTAGCTCATTTGTTTTGAAATTTTGCTGCT
TTGATTGGTCAGTCATTTGATGGCTATGCAAGTTACCAGACTTCACGGTA
TACAGTATCATAGGAAAAAATCAAAAAAAATTACCTTGACCTTTTAGATG
AATTGGCGGTGAAAAACTGTTAATCTTTCAATAATGACATGGTGATTAGC
TGAAATTTCACCGTAAATTTATTAAAAGATTGCAGGTTTTCACCTTGAAT
TACCCTACGGTCAGGAGAAATTTTCATATCTTGCATTCTGTGTATATTCT
GATTGGGTAGCCGATATAATTTTGCATTTCTCCAGAAGAATGTGGAAATT
TGAAGTGAAACAAGATTCTTTTCGATACGATTTTTTCTGATGATGTAATG
TTAGAAATGTGTCCTAAAAAAATTTTGGTTCAAATTTTACATAGACCTCT
GAAGGCTTGAAAAGCTGTTTTTGAACGAGCCAGCTGCTTGCTAAAAATAT
AGTCAAAAAGAAACTTTTTGTTCAGATATTTGAAGATGCTTGAGTACTGC
TCTTGTATCATAGAAGGTGTCGTTGTTCAGATGTTGTGGAAAGTGTTGTT
CAGATATCGTGGAGAGTTATTCCTTCAGTCATAATGGAAAGTGTTGATCA
GCCACCGTGGAAAATGTTGTTTAGATATCGCAGAAAGTCTTGTTTAGACA
CGGTGGAAGGTGTCGGTCTGATATCGTGAAAGGTTTTAGTGCCAAGCTGA
AAAACTGACTATCAAAAAATATAAAAAGATAGCTAAACATCAAACTCAAT
CAAGCCCAACAAAAAAATAAACAGGAAGTAAAATCTGTTAAAATTTAGAC
TATCTTAGAAAAAACTTTACCGAGATTGAAGATTTTTTGCACGCACAAAA
TCATTACTTGACAGAACTGGAAAAAGTCAATATTTCAGTCTCAACTGACA
CTGATTCCTGCTACCATAAAAGAAACTACGAAATCCAGTGAATATAAACC
TTACCTTTAGATGCTACTTCATGTGTCAGGCATCAAGTTGAATAAAATTT
CCAAAAAATCAAAGTTAGAATTTGTTTGTGGGCCTTGAGGAAAACAATCC
CTTCTAACTAATATTGTCATAAAAGCTAAAAATGAATGCGTTTATGTAAG
GTCTTATCTTCAGCCTCCAAATTATCCTACAAGAACATTCTTCTTCACCA
GACCCAGAACCATCATGCTCAAAGAAAACAACCATTTTTTGGATAAAGTT
CACTTCCTACTTGCATCCTTCCCTTCGATTTTGTGTTGTTTTGATTTTCT
CAGCCAAGTTCGTCTATAAATCTGCAGGGATTTTCCGCAAAATTCACCGA
CCCTTCTCCAAGGTCGGTAAGGGCAAAGATAAAATCAAGAAAAGAGCCAA
ATTGATATCGTCCGTAAACACAGACTCTATCCGCCGCGAAACATATTACG
TTTTATAATATACAAATTATGTTATATCATAATAATATATTATACGGACG
ATAGCATCGTCTACCTGCTGACAAGAAACTTAGTCTTTCCAATACTGTTG
AATCTTGGCTAGTTCGGAAGAAATGCACCAAGCTTGATCTTCTTTCTCTC
ATAGGTTCTCTTTCCTTTGCATGCAAGGTCATCAAACCTGGTAGGATTTT
CCTGCGTCGTCTTATTAACCTTTCTACTTCTGTAGTTAAGCTCCATCATC
ATATCTCTCTCCCTAAATCAGTTCAAGAAGATCTTATTATGTGGTCTACT
TTCCTCCGCTCTTGGAATGGGAAATCCATTGTGCTGAGCCCCGTTGTGTC
TTCCCAATCCCTAGCTTTGTCCACTGATGCATCCTTCTTGGGTTTTGGTG
CCTTTTTTCAGGGACATTGGATCTCCGTTCCCTGGCCTTCCCCTCCTGCT
CAGCACAAAGGAAAACCTATTCACATTGCTATCCTAGAGTTGTTTGCCAT
CTATGCTGCTCTCTCTTCCTGGAAACAGTCGTTCTTTTCCCAACAAGTCT
TGATCTTCACAGACAATGAGACCATTGTGTCAGTCTGGGCCTCTGGTACC
TCCAAAGATCCTAGAATCATGTGTATTGTCCGAATTCTTTTCTTTCTATC
TGTAGAAATCAATGCCTCCTTTACTTTCCAACATGTCGCAGGCAAAGACA
ACATCTTTTCTGATCTCCTATCTCGTCTACAGGTCGAGAAATTCAAATCA
ATCTGCCCAGCTTCAGATCAATGTCCGTCAGTCATTCACACCTCTATCAT
GGACCTTTGGGAAGAGATCTTGTCCATTTCTTGAGACAGTCTACAGCCCC
GTCAACACAAAACACCTACCGATCAGGCATCCGTTCTTACACAACATTCT
GTCTTTCGAATCAAATTACTCCTTTTCCAGTCACTGAAGCTTCTTTGTGT
TTTTATGCTGTTTCCTTAGCCAATCGTAAGCTATCGTTCAAGACTATCAA
AGTGTATATATTTGGGGTCCTTTATCAAAACAATATGCTGGGTCAATTTC
CTCGCTTATCAGATTTCAACATCTTATTTCACACTCTTCGCGGAATCCGG
CGTTCTCAAGGTAACTTGTCTTCTCGACCACCCAGGTCCCCTATCACAAT
TCAACACCTTCACATTATCCTGGATTATCTCAACCACTCCGGATTCTCAC
CTACCGACAAGGCCATGTTTCAAGCTGCATCTCTTCTCGCATTCTTTGGA
TTACTTAGAGTATCAGAGTACACATGCCCATCCCCTTGCAGATTTGATCC
GACTTCCCACCTCCAAGTATCAAATGTTTCTTTCAACGCAAATTTTACAA
TGATGCTTGTCAGAATCAAAGCCAGCAAAACTGACCCATTT Coding sequence (CDS) from alignment at sc0000049_pilon:1368854..1375794- >XLOC_020454 ID=XLOC_020454|Name=XLOC_020454|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2106bp|location=Sequence derived from alignment at sc0000049_pilon:1368854..1375794- (Clytia hemisphaerica_ch_hm2_pilon)
GCCATACAACAACCATCTGGCGGAGCACCAGCAACCAATTCCATTTCAAT
CGTGAGAGAAGATAACTCCTCAAACCTATCACAAAATCAATTAATGGTGC
TGATTGACGACAGACTCACATCAACAATGTCTCGTTTCCTAACCAATAAC
GTCAACAGCCTTACTTCTGGTACGCCTGGAAATTCAGTTCCCCATCAACG
CTACCAATCTCAACAACAACAACAACTCGATCTACCATCTTTGCTGCGAC
AAAATCACAACAATCCCTCGGCGCCGGCAAATTTCCTTTCCCTCAACTCT
CAACAACAAGACGATCAAAATGGCCGCCCTCAAGAACTTTCGAATTTGCA
ACTACCTCCCGTCTCAGCCAATGTTATCAACAGGAGCAGACGTTGCCATA
CAACAACCATCTGGCGGAGCACCAGCAACCAATTCCATTTCAATCGTGAG
AGAAGATAACTCCTCAAACCTATCACAAAATCAATTAATGGTGCTGATTG
ACGACAGACTCACATCAACAATGTCTCGTTTCCTAACCAATAACGTCAAC
AGCCTTACTTCTGGTACGCCTGGAAATTCAGTTCCCCATCAACGCTACCA
ATCTCAACAACAACAACAACTCGATCTACCATCTTTGCTGCGACAAAATC
ACAACAATCCCTCGGCGCCGGCAAATTTCCTTTCCCTCAACTCTCAACAA
CAAGACGATCAAAATGGCCGCCCTCAAGAACTTTCGAATTTGCAACTACC
TCCCGTCTCAGCCAATGTTATCAACAGGAGCAGACGTTGTCGAGAAATTC
AAATCAATCTGCCCAGCTTCAGATCAATGTCCGTCAGTCATTCACACCTC
TATCATGGACCTTTGGGAAGAGATCTTGTCCATTTCTTGAGACAGTCTAC
AGCCCCGTCAACACAAAACACCTACCGATCAGGCATCCGTTCTTACACAA
CATTCTGTCTTTCGAATCAAATTACTCCTTTTCCAGTCACTGAAGCTTCT
TTGTGTTTTTATGCTGTTTCCTTAGCCAATCGTAAGCTATCGTTCAAGAC
TATCAAAGTGTATATATTTGGGGTCCTTTATCAAAACAATATGCTGGGTC
AATTTCCTCGCTTATCAGATTTCAACATCTTATTTCACACTCTTCGCGGA
ATCCGGCGTTCTCAAGGTAACTTGTCTTCTCGACCACCCAGGTCCCCTAT
CACAATTCAACACCTTCACATTATCCTGGATTATCTCAACCACTCCGGAT
TCTCACCTACCGACAAGGCCATGTTTCAAGCTGCATCTCTTCTCGCATTC
TTTGGATTACTTAGAGTATCAGAGTACACATGCCCATCCCCTTGCAGATT
TGATCCGACTTCCCACCTCCAAGTATCAAATGTTTCTTTCAACGCAAATT
TTACAATGATGCTTGTCAGAATCAAAGCCAGCAAAACTGACCCATTTGTC
GAGAAATTCAAATCAATCTGCCCAGCTTCAGATCAATGTCCGTCAGTCAT
TCACACCTCTATCATGGACCTTTGGGAAGAGATCTTGTCCATTTCTTGAG
ACAGTCTACAGCCCCGTCAACACAAAACACCTACCGATCAGGCATCCGTT
CTTACACAACATTCTGTCTTTCGAATCAAATTACTCCTTTTCCAGTCACT
GAAGCTTCTTTGTGTTTTTATGCTGTTTCCTTAGCCAATCGTAAGCTATC
GTTCAAGACTATCAAAGTGTATATATTTGGGGTCCTTTATCAAAACAATA
TGCTGGGTCAATTTCCTCGCTTATCAGATTTCAACATCTTATTTCACACT
CTTCGCGGAATCCGGCGTTCTCAAGGTAACTTGTCTTCTCGACCACCCAG
GTCCCCTATCACAATTCAACACCTTCACATTATCCTGGATTATCTCAACC
ACTCCGGATTCTCACCTACCGACAAGGCCATGTTTCAAGCTGCATCTCTT
CTCGCATTCTTTGGATTACTTAGAGTATCAGAGTACACATGCCCATCCCC
TTGCAGATTTGATCCGACTTCCCACCTCCAAGTATCAAATGTTTCTTTCA
ACGCAAATTTTACAATGATGCTTGTCAGAATCAAAGCCAGCAAAACTGAC
CCATTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1368854..1375794 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 397-1053:658 |
| Aaloc | 1-393:6942 |
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