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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000359_pilon:207677..212603- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020382 ID=XLOC_020382|Name=XLOC_020382|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4927bp|location=Sequence derived from alignment at sc0000359_pilon:207677..212603- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTATAATCGAGTTGTTAGATTTGGACAAAGACCAACTGCATGATGG
GTTTGAAGTCAAGAAAAAACTGGTTCGCTTTGATGAAAACACTAAACAAG
TAGAGTAAGTTTTTAAACATTTTGAAGGTTGTTAAGATGCTTTATATTAC
CATAAATTTTAATGGCAAATCATCAATTTTGGTCTGGGTATTAGTTTAGG
TGACTTACTGTACCGAAACGGTTTGAGAAGATAACCAAACTTCCAAGACT
GTAACTGAGGAAGGACAGAAAGAAAAAGATCATGCCGCGAATGAAATCCT
GGTACTTTTCTATTCAACATTTAGACTCAACATTCATTTGGTTCCGCGTA
AATCACTCACCGCTATAAAAGATGAAATTCTTGGAAGATTTATGAGCGTA
ATTTCCCCGAACGCTCCGACACCTTTCAATCTCAGTCAGAATGAAATTTC
TGACGCTACTGGGACTAAATTATTTAAAGGTAATACATTTGAATTGTAAG
AAAATAAATTTCCTCATAATGATACTACATTAAGTTTATTCGAATCAGAG
CGATTGTTGAAAATATTTTGAGCTCAGTCCTTTCTCAAAAGTAGTAAAAA
TTCGTTCTAGGTATATTTGTTATGCTTGTAGCATGGCTCATGACTTTTGA
AAACAAGTCATTACTGTTTAACAAAAGTTACCAAATTACAACAATTATTA
ACTTCACACTATGTGCGACCAAAACTAATAGTTTTAGAGGGGGTTCACTT
TTTAATTCTCTTTTCCCTTCTTTAGGACGTAAAGATGTTTCTGCATTGCG
GACAAAAATTGAGGAAGAGAAGAAACGTATAATGAAGGGAGGTCGATTAC
GTTTCACCGTGTACGAGGAAGACGACCCAACACAATCTGTGCAAGCACAA
ATTATTTCAAAACCAATTTGTAAGTATAGCGCTTTAATTGAACGCTGGAG
GACAAAGATAAGCGAAATAGTGAACTGCAAGTATGATAAACTTTACACAG
AATTTTAGTCTAAGAGACTCATCCTCGACTTAGTCTGATCTTAAAGAATC
ATCCATCTTCAGCCAAAGCTATAACTTTCTTATAACATAAGCGTTTGTTA
GTGTAATTGTGAAGACAGTGCTTTGCGACAGCGCGACTCCGCCTTCGAGA
ATCCTGTTTCAACTGATGCGATAGCTATCTATACCTAGGTCATTCAAGTT
ATACAACTCCTGACTTTTTGGCTGTTTCATGACATTGTTTAAAAAGAATA
TGAAAATTGGAGATTCAAGAACAATTACAAAATAAATATGTTCCACGAAA
ATACCCGTCCTCAAACATTAAAGAAATTGTGATGTCATTTAATATTTTTG
GAGACGTTTTTTCTTTCTTTCAGTGAATGGTGTTGAACTGAAGACTCTTA
AACTTCTTTTCCCGGGGAATGATCAAGAAAACCATATCACAGCCAGCTGT
AAAGGTGGTGACGAAGTATGGATCAATATTGATATCAAACATCCTACTAA
AAGTAAGCTTACCAAAACCAAAGCAAATCCCTTGTTAGTTTTTTTCCTCC
TTTCCCGGGGGGGGGGAGGGGCTGTCAGATACGCATCTTGAAAATTAGTA
TATTGGGGAACTTGTCAGACTAAAATAAGGGGCCCTGACCAGGGGCTCGT
CTCCGTACACAAATTTGCCTAAGTGCCCCCCCCGGGTATCCAGTGTACGT
CAAACCTTAAAAATTCACCAGTGTAAAGTAAATTTAGCTGCGCAATATTG
ATGTAATCTTCGTCTATGTTTCATTGTTATTAGTTTCTTTTACGTTAGAT
TTTTTGACAGCTCTGATTTGATATTCATTGCATCTTCTATCATGGGCCCC
GGCGAGCCATTTTGAGTGAGGGGGCCAACATTTTGGAGAAAAAAATTTCG
CCCACCATGGTTGTGTGACGAAGAAAATTTTTCACTTTTTACACCCTCAA
AATACCTCAAAACGATATCTAATTGGGAAGAATAACTACCAAAAAGGGGG
GGGGGCATGGACCCCCTGGCCTCCCCGTTGACGGGGCCCATGTCTAATTA
TTTTTTCAACTTTTTCAAATATTTTTTTCATTATAGAAAAATCTGTTAAA
GTTCATTTTCAAGCTAACAACGGTAAGGGCTCAGTCTAAATGTTATTTCT
ATAAATGTTATTTGTTTGAATATTTCAAATTGTAGAGTTACTTTCTCACA
AGATTTGGTTTACTGTACTGTGACGATTCAAATTTTTTTCATAGCATATA
TCGTTCGTCTACATAGCAATTTTGTTGAAGCTCAAGGGGCCTAGTAAAAT
TTCACTTTTAGACTTGAATAATTTATCGACCGTCTGTTTGACTAAAATCA
CGCAATTTGATAATTCCATTAATTAATTTTCGCGCGCTTTTGCTTTAGCA
CAGAAAACGTGTGCGAAATGGTAATCGTTGTAAAGGTGTAGCAATCTCAT
CTAAGGGCTCTGTTAATAAAACGAGTCCACAATTCTTGTTAAATGATATA
TATGTCCCTGTGATGTAAAATGTAGCTGAAATGCACACTAAAGCTAAGTT
TGCTCTTATTACCTTTAGTTTTAAAAGGTGCACGAAAATAGAAAAGTGTG
AAAATTAGAAGCACGAACATTAATGAGAACAAGGTAATTTAACTTTGCGG
CTTTTATAGCGTGTGATGATTCGAATTAACTTGTTATTTTCTTTATAAGG
TTGGAAACATACTCAGACGGAGTCCGTACTTGGAAATGTAAGAATATCTT
TTTCTTTTCCAACGTTTCCATGAGCACACTGTATCGAGATTTATGATCTA
TAATATATATTATCTATATATAACAGTATATAACATCTAAAAACCATCGT
TGTTTTTTACACCCCCCCCCCCCGCAATTGTACTTATTGAATGAACCTGG
GCTCGCTGGGTCAACTTAATCGTAATACGGATTTCTACTATTATAAACCT
ACAATTTCTATACTTCTATTTCTAAGTGTGAAAGTTCCGAGTTCGGCGGG
TCGGTTAATCGCTAATCGCCCGCTCTTTTAAACTCGGCCAGCATTTTTTA
CAGTGTAAATAAGCTCTTAACACAGAATTTTTGAAATCAATTATTTGAAT
TAAATTTAGGTTGTAGTGATTTGTAAAGTACCAAAATATCAAGATGACAT
CCGGATTGGTAAACGTGTCGAAGCAACCATACAGTTCTCTCTTATGGAAG
GTCCCACCAATTTATCGAACCCGATGATATTCTATTATGTACCCGAGGAG
ATCTGTCAAGATAGTAAGTTTCGATATTGTGATTATTTCGGATATTGTAA
AATCAGATGTGTTTAATAAAATGAAGAATCAGGGTAGCTAATTCTTTTTG
TTGGCATTGAAATTGAAAAGATAGAGAGTTTTTAAAAACTACGTTATCCT
TTCGTTTCAGATCATTTGAAACGAATGGCTGCCACATCCATTGATGAAAA
TTTTCAAAGAGATTTACGTGCAGTCAAGAAACCAAAAGTGAATTATCCAG
ACACATCCAATGTCACTTTGCAGCAAGTGGCAAAGGAAATGCAGCATTAT
AGTTCTGTTAACGGAACAGAACTTCATGATAGCACGCCTGGACCATCGTC
GATCACGACTCAACATAATGCTCCGTCAACTGGTCCACCCTTTGTTCAAA
CTCCGCTGAAAACAAACTGGACATCACAAAATACCTATGTCCATGGACAA
TTATTGGCTACGATCCAGCAAATTGGAGTTTCGACATCATCAAGCGATGT
TGTTCAGAAACCAGACGCTTCAGCTTCCGTGCATAGGATACCATACAAAG
ATGGTGAGCAGATGGATCCAGGCGCTTCGCTATCATTTAACAGTGAATTG
AGTGTTCTTTCTAATGAGGAGGAAAAACACTCACAAATTGAAACGACTCA
TCACCAACGAGATGTCAATGGGAAACAAGCTCACGACACCTCAATTTTGA
TTGGTAATCCATCAAGTGCTGATGCCCTGAGCGTGGTTCAAGATTCGTCT
GACAAAGACCCTCAAATAACACCGTCCGGTCTGACACTATTCGGACCCAA
CAAAGAAGTCACCCAAGGAAGCATTAAACCAAACGATTACCCTCAAAAGG
TTTTCTCAGATGTTCCGCAATCGAGCAGAACTCTTTCAAACACAAACTTT
GCTTTTCCCGATCAGATAAAAGTATTCCAGCAACAAAAGTCAAATGAAAG
TCAAGCTCCTGTCGATAATCGTAATGTCGGAAACGCCCAAAGTGGAAACT
TTATTGTTACTATGGCGACAATAGACTCAGGCTACGTACCTCTATTACCG
ACCAATGAACAAACAAACCAAACACATAACCAGGATACAGTATTACAGGA
CTTCCTTCGACCCTTCGAACATGGCACCCCAGAAAATGATCCTTTCCCGA
CCCAGACGGTATGTGATACATCTCTGATCGTTATTTTACTGAGCAAGCAC
CTAACCAAACAATTACTTTGGAAAAAGCCTCTGATCCAATCACCTCTAGT
AAACTCGATAGCTTTCTTCAGTTGGAAAGTGGACATAGAGGAGTTTTCAG
CCAAATATTTCTTAAAGACTTGTTTAAAATGTAGGAGGGTACTATCAAAT
TTTTTGAGGGTAGTTACTTAAAGTTTTTAATTTTTGTGGGGCGGAGACGA
CTTCTGGAAAGTGACTAAAGTTTTACCCCATCCAAGATAAATCTTTCCTC
CTTATTATTTAGTCTCTAGCTTTTCACACTCAACACGTTATATTTTCACT
TTAATCCTACAGAGCACCACATCAACCAATGAAAAGACACCAAGTTTTCT
CAAGATCTTGGAAGACGTGAAAGAAATCGGCACAGCCGAATACAATGGCA
AATCTTTTGCAAGTTTACTTGCAGATTCTATCATGATGTCAGACGACGAA
AACAAAATCGACTTTCAAATAAATTAA Coding sequence (CDS) from alignment at sc0000359_pilon:207677..212603- >XLOC_020382 ID=XLOC_020382|Name=XLOC_020382|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3846bp|location=Sequence derived from alignment at sc0000359_pilon:207677..212603- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTATAATCGAGTTGTTAGATTTGGACAAAGACCAACTGCATGATGG
GTTTGAAGTCAAGAAAAAACTGGTTCGCTTTGATGAAAACACTAAACAAG
TAGAATGCTTATAATCGAGTTGTTAGATTTGGACAAAGACCAACTGCATG
ATGGGTTTGAAGTCAAGAAAAAACTGGTTCGCTTTGATGAAAACACTAAA
CAAGTAGAACTCAACATTCATTTGGTTCCGCGTAAATCACTCACCGCTAT
AAAAGATGAAATTCTTGGAAGATTTATGAGCGTAATTTCCCCGAACGCTC
CGACACCTTTCAATCTCAGTCAGAATGAAATTTCTGACGCTACTGGGACT
AAATTATTTAAAGACTCAACATTCATTTGGTTCCGCGTAAATCACTCACC
GCTATAAAAGATGAAATTCTTGGAAGATTTATGAGCGTAATTTCCCCGAA
CGCTCCGACACCTTTCAATCTCAGTCAGAATGAAATTTCTGACGCTACTG
GGACTAAATTATTTAAAGGACGTAAAGATGTTTCTGCATTGCGGACAAAA
ATTGAGGAAGAGAAGAAACGTATAATGAAGGGAGGTCGATTACGTTTCAC
CGTGTACGAGGAAGACGACCCAACACAATCTGTGCAAGCACAAATTATTT
CAAAACCAATTTGACGTAAAGATGTTTCTGCATTGCGGACAAAAATTGAG
GAAGAGAAGAAACGTATAATGAAGGGAGGTCGATTACGTTTCACCGTGTA
CGAGGAAGACGACCCAACACAATCTGTGCAAGCACAAATTATTTCAAAAC
CAATTTTGAATGGTGTTGAACTGAAGACTCTTAAACTTCTTTTCCCGGGG
AATGATCAAGAAAACCATATCACAGCCAGCTGTAAAGGTGGTGACGAAGT
ATGGATCAATATTGATATCAAACATCCTACTAAAATGAATGGTGTTGAAC
TGAAGACTCTTAAACTTCTTTTCCCGGGGAATGATCAAGAAAACCATATC
ACAGCCAGCTGTAAAGGTGGTGACGAAGTATGGATCAATATTGATATCAA
ACATCCTACTAAAAAAAAATCTGTTAAAGTTCATTTTCAAGCTAACAACG
AAAAATCTGTTAAAGTTCATTTTCAAGCTAACAACGGTTGGAAACATACT
CAGACGGAGTCCGTACTTGGAAATGTTGGAAACATACTCAGACGGAGTCC
GTACTTGGAAATGTTGTAGTGATTTGTAAAGTACCAAAATATCAAGATGA
CATCCGGATTGGTAAACGTGTCGAAGCAACCATACAGTTCTCTCTTATGG
AAGGTCCCACCAATTTATCGAACCCGATGATATTCTATTATGTACCCGAG
GAGATCTGTCAAGATAGTTGTAGTGATTTGTAAAGTACCAAAATATCAAG
ATGACATCCGGATTGGTAAACGTGTCGAAGCAACCATACAGTTCTCTCTT
ATGGAAGGTCCCACCAATTTATCGAACCCGATGATATTCTATTATGTACC
CGAGGAGATCTGTCAAGATAATCATTTGAAACGAATGGCTGCCACATCCA
TTGATGAAAATTTTCAAAGAGATTTACGTGCAGTCAAGAAACCAAAAGTG
AATTATCCAGACACATCCAATGTCACTTTGCAGCAAGTGGCAAAGGAAAT
GCAGCATTATAGTTCTGTTAACGGAACAGAACTTCATGATAGCACGCCTG
GACCATCGTCGATCACGACTCAACATAATGCTCCGTCAACTGGTCCACCC
TTTGTTCAAACTCCGCTGAAAACAAACTGGACATCACAAAATACCTATGT
CCATGGACAATTATTGGCTACGATCCAGCAAATTGGAGTTTCGACATCAT
CAAGCGATGTTGTTCAGAAACCAGACGCTTCAGCTTCCGTGCATAGGATA
CCATACAAAGATGGTGAGCAGATGGATCCAGGCGCTTCGCTATCATTTAA
CAGTGAATTGAGTGTTCTTTCTAATGAGGAGGAAAAACACTCACAAATTG
AAACGACTCATCACCAACGAGATGTCAATGGGAAACAAGCTCACGACACC
TCAATTTTGATTGGTAATCCATCAAGTGCTGATGCCCTGAGCGTGGTTCA
AGATTCGTCTGACAAAGACCCTCAAATAACACCGTCCGGTCTGACACTAT
TCGGACCCAACAAAGAAGTCACCCAAGGAAGCATTAAACCAAACGATTAC
CCTCAAAAGGTTTTCTCAGATGTTCCGCAATCGAGCAGAACTCTTTCAAA
CACAAACTTTGCTTTTCCCGATCAGATAAAAGTATTCCAGCAACAAAAGT
CAAATGAAAGTCAAGCTCCTGTCGATAATCGTAATGTCGGAAACGCCCAA
AGTGGAAACTTTATTGTTACTATGGCGACAATAGACTCAGGCTACGTACC
TCTATTACCGACCAATGAACAAACAAACCAAACACATAACCAGGATACAG
TATTACAGGACTTCCTTCGACCCTTCGAACATGGCACCCCAGAAAATGAT
CCTTTCCCGACCCAGACGATCATTTGAAACGAATGGCTGCCACATCCATT
GATGAAAATTTTCAAAGAGATTTACGTGCAGTCAAGAAACCAAAAGTGAA
TTATCCAGACACATCCAATGTCACTTTGCAGCAAGTGGCAAAGGAAATGC
AGCATTATAGTTCTGTTAACGGAACAGAACTTCATGATAGCACGCCTGGA
CCATCGTCGATCACGACTCAACATAATGCTCCGTCAACTGGTCCACCCTT
TGTTCAAACTCCGCTGAAAACAAACTGGACATCACAAAATACCTATGTCC
ATGGACAATTATTGGCTACGATCCAGCAAATTGGAGTTTCGACATCATCA
AGCGATGTTGTTCAGAAACCAGACGCTTCAGCTTCCGTGCATAGGATACC
ATACAAAGATGGTGAGCAGATGGATCCAGGCGCTTCGCTATCATTTAACA
GTGAATTGAGTGTTCTTTCTAATGAGGAGGAAAAACACTCACAAATTGAA
ACGACTCATCACCAACGAGATGTCAATGGGAAACAAGCTCACGACACCTC
AATTTTGATTGGTAATCCATCAAGTGCTGATGCCCTGAGCGTGGTTCAAG
ATTCGTCTGACAAAGACCCTCAAATAACACCGTCCGGTCTGACACTATTC
GGACCCAACAAAGAAGTCACCCAAGGAAGCATTAAACCAAACGATTACCC
TCAAAAGGTTTTCTCAGATGTTCCGCAATCGAGCAGAACTCTTTCAAACA
CAAACTTTGCTTTTCCCGATCAGATAAAAGTATTCCAGCAACAAAAGTCA
AATGAAAGTCAAGCTCCTGTCGATAATCGTAATGTCGGAAACGCCCAAAG
TGGAAACTTTATTGTTACTATGGCGACAATAGACTCAGGCTACGTACCTC
TATTACCGACCAATGAACAAACAAACCAAACACATAACCAGGATACAGTA
TTACAGGACTTCCTTCGACCCTTCGAACATGGCACCCCAGAAAATGATCC
TTTCCCGACCCAGACGAGCACCACATCAACCAATGAAAAGACACCAAGTT
TTCTCAAGATCTTGGAAGACGTGAAAGAAATCGGCACAGCCGAATACAAT
GGCAAATCTTTTGCAAGTTTACTTGCAGATTCTATCATGATGTCAGACGA
CGAAAACAAAATCGACTTTCAAATAAATTAAAGCACCACATCAACCAATG
AAAAGACACCAAGTTTTCTCAAGATCTTGGAAGACGTGAAAGAAATCGGC
ACAGCCGAATACAATGGCAAATCTTTTGCAAGTTTACTTGCAGATTCTAT
CATGATGTCAGACGACGAAAACAAAATCGACTTTCAAATAAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000359_pilon | genome | sc0000359_pilon:207677..212603 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1759-1923:166 |
| Aaloc | 763-1758:1516 |
| Aaloc | 607-759:1819 |
| Aaloc | 571-606:2227 |
| Aaloc | 535-567:2840 |
| Aaloc | 406-531:3553 |
| Aaloc | 262-402:4151 |
| Aaloc | 106-258:4603 |
| Aaloc | 1-102:4928 |
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