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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000487_pilon:50499..52517+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020303 ID=XLOC_020303|Name=XLOC_020303|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2019bp|location=Sequence derived from alignment at sc0000487_pilon:50499..52517+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCATCTCAATCTGCAATCAACATCAAAGTCCTTATCCAGGAGGTAGC
TGACACTATTGACGAAAATCCTGTCGAACCTGGAGCTGACTACAAAGACG
TCATCGAGAGGTTAATCGAGTTACGTAAATCCATTCGTTCCAATGAACAA
ACTCTCGTTACTGAAACCCCCGATCCAATCTTGACAACAACCATCCTAGA
GACACTCAACGTGATGAAGGATTACATCAAGGATGCTACCAGATCCAAAC
GTCATTTTCAAATGGTACAAGCAAAGCAGGAAAGTGATGCTGTTGACCGT
AAGGAAAAATCACTTCTATTCTCAATAAAGGATTCTAAAAATTCTATCGA
GGAGCTTATTACTCAGTTCTCACGCCAACCAAAAGACTGTTCCAACGAGG
AGTTAATGGACATGAAATCAAATCTATCATCACATATCAACTTAGTCAAT
GAAACTTCAAAACGTCTTGAATCCATCTCTTCAGCTGAAACCAACAATGA
AACTACTACAGAAGCAATCCAACGTCTATTGGAACGGTATGATCATTTGA
CTTTATTAAAATCTGTGTACATCAGAGATCTCAACAAAGAAATCGATGAC
CGTCAAGTCTATAAGCAAAAGTTGTTTTCTGAATCGAACCTGAACATTAA
ACTTGAGAAGTTTTCTGGATATTCAGATAGTATCGATATTTATACCttca
agtcaaaatttgaaagactACATCTCAAAACTACTCCGAAACATCTACTT
GCTGATTTACTCAAGAATAACTATCTGAAGGAACCAGCCCTGAGTTGTGT
CAAAACTCAAGATGACATAGACGAAATTTGGGATCGACTGAATCAAGCCT
ATGGCAACGTCATGCTCATCCtccaaagaaaaatcaaccAACTGACGTCA
TCAAGTTCCATTCAACGCTCCAAAGACACTGGATCAATCATTGAATCAAT
GACCAATATTGTCAACCTCATCAAGGACCTTACATCTTTGGCAAGGGAAC
ATCACGTCGAGAATTATCTGTATTACGGTGGTGCAATCAACAAAGTCTAT
AACCTGCTTGGTGATGCCAGGCTATCAAGATGGTTAACACAGATATCAAA
CGTCACTCTTACACCTGAGGAGACTTGGTCAAAACTGTGCACCTTCCTCG
AAGATGAGCTGAAAATCCAACACCAGAAGCTGACAGTGAAATCAAGCATT
CAAGACAACAAGACCGATAACAAACGTCCAAACAACCAAGATTCATCCAA
ACGAACTGGATCAAATCAAGACTCATCAAAGAACAACGGGACTCAGAGgt
atggattttcttcatttccTTCCATACCTCAATCTGAGCCCATTTGCTTT
ATCTGTGGTGCAAAAGACGGAACTGATGAACACGTATCCACTCTTGGTCC
TGGAGGCACCAGGATTCTTCAGTACTACACCTGCAAGAAGTTTGTAGAAT
TAAGTCCAGCTGATAGACTCTCATTACTAAGAAGCAAAAGATACTGCTTT
CAGTGCCTTTTTCCAGGTGCTGATGCTTCATCACCTAAGCACAAAGAAGG
GAGATGTCAACGTGATTACACCTGCCAAAATCCTATCCACCAGAAGTATC
CAACCAAAAAACACGTCCTTGTTTGCAACGACCACAAGGAGGATCAAGTC
AACAAAGATTTGTTATCAACTTACAAACAACGCTGTGTCCGAAGCTCCAA
TCTGccagaattttccaaaaacatcAGTTTATCATTTCATGCACATGAAT
CGTTCAAGACGACTCCAACATCTGGTGATAAAGAATCAACTGACCAGCGT
GGTATCTACATGCTACAAACAATCTCAATTGACAACACCCCATACACTAT
CTTCTATGACACAGGGTGTAGTGACTTTATCGTCAAACGTTCAGCCATTC
AATCACTTGGTTCAAGAGCTACAAAAATGTCATCCCAAGTTACGTCCATC
GGCGGAGTTGGTCAAACATCATTGCAGTCATTTGGAACCTTCAACGTCAA
AATCCCAATGCACGATGGC Coding sequence (CDS) from alignment at sc0000487_pilon:50499..52517+ >XLOC_020303 ID=XLOC_020303|Name=XLOC_020303|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3228bp|location=Sequence derived from alignment at sc0000487_pilon:50499..52517+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCATCTCAATCTGCAATCAACATCAAAGTCCTTATCCAGGAGGTAGC
TGACACTATTGACGAAAATCCTGTCGAACCTGGAGCTGACTACAAAGACG
TCATCGAGAGGTTAATCGAGTTACGTAAATCCATTCGTTCCAATGAACAA
ACTCTCGTTACTGAAACCCCCGATCCAATCTTGACAACAACCATCCTAGA
GACACTCAACGTGATGAAGGATTACATCAAGGATGCTACCAGATCCAAAC
GTCATTTTCAAATGGTACAAGCAAAGCAGGAAAGTGATGCTGTTGACCGT
AAGGAAAAATCACTTCTATTCTCAATAAAGGATTCTAAAAATTCTATCGA
GGAGCTTATTACTCAGTTCTCACGCCAACCAAAAGACTGTTCCAACGAGG
AGTTAATGGACATGAAATCAAATCTATCATCACATATCAACTTAGTCAAT
GAAACTTCAAAACGTCTTGAATCCATCTCTTCAGCTGAAACCAACAATGA
AACTACTACAGAAGCAATCCAACGTCTATTGGAACGGTATGATCATTTGA
CTTTATTAAAATCTGTGTACATCAGAGATCTCAACAAAGAAATCGATGAC
CGTCAAGTCTATAAGCAAAAGTTGTTTTCTGAATCGAACCTGAACATTAA
ACTTGAGAAGTTTTCTGGATATTCAGATAGTATCGATATTTATACCttca
agtcaaaatttgaaagactACATCTCAAAACTACTCCGAAACATCTACTT
GCTGATTTACTCAAGAATAACTATCTGAAGGAACCAGCCCTGAGTTGTGT
CAAAACTCAAGATGACATAGACGAAATTTGGGATCGACTGAATCAAGCCT
ATGGCAACGTCATGCTCATCCtccaaagaaaaatcaaccAACTGACGTCA
TCAAGTTCCATTCAACGCTCCAAAGACACTGGATCAATCATTGAATCAAT
GACCAATATTGTCAACCTCATCAAGGACCTTACATCTTTGGCAAGGGAAC
ATCACGTCGAGAATTATCTGTATTACGGTGGTGCAATCAACAAAGTCTAT
AACCTGCTTGGTGATGCCAGGCTATCAAGATGGTTAACACAGATATCAAA
CGTCACTCTTACACCTGAGGAGACTTGGTCAAAACTGTGCACCTTCCTCG
AAGATGAGCTGAAAATCCAACACCAGAAGCTGACAGTGAAATCAAGCATT
CAAGACAACAAGACCGATAACAAACATGCCATCTCAATCTGCAATCAACA
TCAAAGTCCTTATCCAGGAGGTAGCTGACACTATTGACGAAAATCCTGTC
GAACCTGGAGCTGACTACAAAGACGTCATCGAGAGGTTAATCGAGTTACG
TAAATCCATTCGTTCCAATGAACAAACTCTCGTTACTGAAACCCCCGATC
CAATCTTGACAACAACCATCCTAGAGACACTCAACGTGATGAAGGATTAC
ATCAAGGATGCTACCAGATCCAAACGTCATTTTCAAATGGTACAAGCAAA
GCAGGAAAGTGATGCTGTTGACCGTAAGGAAAAATCACTTCTATTCTCAA
TAAAGGATTCTAAAAATTCTATCGAGGAGCTTATTACTCAGTTCTCACGC
CAACCAAAAGACTGTTCCAACGAGGAGTTAATGGACATGAAATCAAATCT
ATCATCACATATCAACTTAGTCAATGAAACTTCAAAACGTCTTGAATCCA
TCTCTTCAGCTGAAACCAACAATGAAACTACTACAGAAGCAATCCAACGT
CTATTGGAACGGTATGATCATTTGACTTTATTAAAATCTGTGTACATCAG
AGATCTCAACAAAGAAATCGATGACCGTCAAGTCTATAAGCAAAAGTTGT
TTTCTGAATCGAACCTGAACATTAAACTTGAGAAGTTTTCTGGATATTCA
GATAGTATCGATATTTATACCttcaagtcaaaatttgaaagactACATCT
CAAAACTACTCCGAAACATCTACTTGCTGATTTACTCAAGAATAACTATC
TGAAGGAACCAGCCCTGAGTTGTGTCAAAACTCAAGATGACATAGACGAA
ATTTGGGATCGACTGAATCAAGCCTATGGCAACGTCATGCTCATCCtcca
aagaaaaatcaaccAACTGACGTCATCAAGTTCCATTCAACGCTCCAAAG
ACACTGGATCAATCATTGAATCAATGACCAATATTGTCAACCTCATCAAG
GACCTTACATCTTTGGCAAGGGAACATCACGTCGAGAATTATCTGTATTA
CGGTGGTGCAATCAACAAAGTCTATAACCTGCTTGGTGATGCCAGGCTAT
CAAGATGGTTAACACAGATATCAAACGTCACTCTTACACCTGAGGAGACT
TGGTCAAAACTGTGCACCTTCCTCGAAGATGAGCTGAAAATCCAACACCA
GAAGCTGACAGTGAAATCAAGCATTCAAGACAACAAGACCGATAACAAAC
ACCACAAGGAGGATCAAGTCAACAAAGATTTGTTATCAACTTACAAACAA
CGCTGTGTCCGAAGCTCCAATCTGccagaattttccaaaaacatcAGTTT
ATCATTTCATGCACATGAATCGTTCAAGACGACTCCAACATCTGGTGATA
AAGAATCAACTGACCAGCGTGGTATCTACATGCTACAAACAATCTCAATT
GACAACACCCCATACACTATCTTCTATGACACAGGGTGTAGTGACTTTAT
CGTCAAACGTTCAGCCATTCAATCACTTGGTTCAAGAGCTACAAAAATGT
CATCCCAAGTTACGTCCATCGGCGGAGTTGGTCAAACATCATTGCAGTCA
TTTGGAACCTTCAACGTCAAAATCCCAATGCACGATGGCACCACAAGGAG
GATCAAGTCAACAAAGATTTGTTATCAACTTACAAACAACGCTGTGTCCG
AAGCTCCAATCTGccagaattttccaaaaacatcAGTTTATCATTTCATG
CACATGAATCGTTCAAGACGACTCCAACATCTGGTGATAAAGAATCAACT
GACCAGCGTGGTATCTACATGCTACAAACAATCTCAATTGACAACACCCC
ATACACTATCTTCTATGACACAGGGTGTAGTGACTTTATCGTCAAACGTT
CAGCCATTCAATCACTTGGTTCAAGAGCTACAAAAATGTCATCCCAAGTT
ACGTCCATCGGCGGAGTTGGTCAAACATCATTGCAGTCATTTGGAACCTT
CAACGTCAAAATCCCAATGCACGATGGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000487_pilon | genome | sc0000487_pilon:50499..52517 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1228-1614:1633 |
| Aaloc | 1-1224:1 |
|
