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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:412593..417786- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020203 ID=XLOC_020203|Name=XLOC_020203|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5194bp|location=Sequence derived from alignment at sc0000112_pilon:412593..417786- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCGAAGCAAGAAGATGTTGTCCCGGTTCACCTCAATGCTGTCCAA
TGCGGTGGAAGCAGTAAGACTTTCTTTTTTCATTCTACAAACAAAACTTT
TTGTGTGAAGAAGATTTTCAGGGGAATAAACCAAAATCTTCTCCACTTCA
GAATGTCTATTCTACCCAAGCCTACTCCTTATATATCTTCAAAAATGAAA
AACCCTGACTAATTCTTAACAATAACCACTTATCCTTGATTTTATCTTAC
TGAATACAGATATTACATGTTATTGATAAACATTGTTCTAATTGATTCAT
AGTTTGCACCAGAGATGACATTACTTGAACAATTCCGCTATCATTGGAAA
TGTGTTACACAGTTCTTCTTGGACACAGAAGGTAACAAAGATTTGTTTTA
TTACAAAAAAATGTGAATGTGATTATTATTAGTATATATAGTATGAAAAT
CAAATGTTTTCTCCTGTCAGATCTACAAACAACACAGAATGGCCGAATTC
TTTTTCCTCTTAGAGAGACGATGTTATAATGAAAGGGTAATTAGTCCTCT
CTGGGTCCCTCTGTCTTTATCCTGGCTTGGGACAGGCTGACTGTCATTCA
AGACAGTCAGGCGACATTACCTCAGCGGCCTGTACAAGATGACAACAAAC
TCCATATATACAGATAACGTTGAAAATCAAATTGTGAAAATTTATAGATG
AGCGTATTGCAGTTGAAAACACAACAATACCAAACCATCTGGAGCAAATG
ATTGAAGTTTTAAAAATTGAAGAACATGAAAATGGAATATCCAGTGCAGT
ATGTATAAAGAAACCAATTTTTTTAAATGGACTTAGGCTGTTAGGAAACT
GTTTTTGTGATCAATCATTCAAAAAGCAATATGACTAAGAATATCAGATC
ATTCAAAGGTAGGTTCATAGCCTATGATTTATTTCCTAGGCTATGTAAAT
TTCTAGGATGGCTAGTCTTTCTCTCTCTGTCACTGTACTACTCAGAATCT
AGAGACTATCTGGCCTTTTACAGTGGAACTGCATAAAGTGTTGTTGGCAA
AATTATCTTTTGTCTTTTGAAAGTAAACAGGAATATCAATTTTCATAATT
TATTTGATATTTTTTTTCTAGGGTCCAGCAATGGAATTTATGCTACAACA
CAAAATCTTGGAAACAATGCAAACTCTTGGAAAAGCTGATGTAAGGACAC
AGCTCTTTAATACCTTAATCCTATTTATTTTTGCACAGAAAATGTGCTCC
AAAATGATAGGTGTGTGAATTAGTAATCGTAATAAATATGTGTAGAAGTC
TCTTCTAAGGGCTCTTTTTAAGAAATAGTCCTCACAATTAGGTTATATAT
AATGGGTTTAAGGTAAATTTATTTCTGATGTTTGCAAGAAAAAGAAGAGT
GAATAAATAATCTGAAACATCCTACTTTATTTACTTTTATTTGTTTAGTG
TCCACCTGGTATGAAGCGATATGTTTTGATATTTTTTACGAAACTGCTTG
GGAAGCTGAAACAAAAGTTGTTGCCTCACGTCAATGTTCACAAACCAATC
AATGTAAGTTTTCTTTTTTGTCCTTGTTGTGTGTGGTTACGTAACTTGAA
ATGTGTGGAATAACCAAACAAGTTGATTAAATAGAAGAAAATTCTATGAG
ATACACAAATCACGCAATGTAAGTATTGATTTGGGAATGAATGAACAGTT
GAGTAGTATATTCCAGGGAATTCAACTATAGTTTGGTAATAAAATATCTT
GATGCGAGTTCAGGAGATCATGATAAAACACTCCCTTCTCACAAGTAAAA
TTAAAATCAAACTAAATTTCCACTTGTAGAAATTGATACGTTGTTGTGGA
AATGTAAAAGCAGGACCCACTGAAACAGAAGAAGTCCAATTTCTACTGCA
AGTCTCATCAAAACTGAAGCAAGACTCTTATTTGGTTAGCTTCTTTCTCG
AGGTAAGTAGTATCATTTCATCTACATGTTTTTTTTTTTATAAGCATAAC
GCTTATAAGCATATGAAGGCTCAGATTTGCAGATTTCCTAAGCATAACAT
AAGCATATACGCTAGCCTGAAATATTTTTCAAGTAGTCAATCTCTTTCTA
TTCAAAAAGGTTTGCAAGTGGTCAAGTAAAAAAAGACATTCCACGGCTAG
CCACATTCCACTGCTCAAAAATTTAAATGCTTTTTGAATCGAATATTAAC
AACATTTTAAAGATTTTACTAAAAAATTTGGTTGGGTGAATCAAAAGCAT
AATAATTCTTAAGCATATAATAAGCATATTCTATGTCTGGATGCTTTGAA
AGCTTAAGCATACTCGAGCCTGGCCAAGGGGCATACACTTGCTTATAAAA
AAATAACATGTATTATAAAAAAACAATCAAAATCAGATAAACACAAACTA
CATTTTCTTACAAACTTGTTTCCTAATGTATTGAGTTTTTCAATATTCTA
ATCTTATTAGTTTTTGTTTTATTCTTTTTCTTTTATTATGCTCTTTTCTT
TCATAGAAACCAACAAGTACAGAACAGGGGGCGTCTCCACCCCTCTCTCC
AGGTGGCAGTATGGGTAGTGATCGGGAGAAACCTGAATATAGCTTGGTAG
ATTCTCTATTGGTTCTCACTAAAAGTGAGGTATGTATAACTTCAATGTCA
ATTGACTTTGTTTATAAATAGAAAAAATAAAAAAGGCCCTACTTTTAAAA
GCAAGTAGATTTGCAGGCAAATACAGATGTTACATGTTTTGCTGCAAAAT
ATATTATATTCTTTGATGTTCACATATCATGTTTCTCTTTGATTTTTAGG
ATAGTAGAGTAGCTATCAAAGCCTGTGAGGGTCTACTGCTGGTGACATCC
ATATTGGAAGATACTGCAGCCAGTGTGATTGTGCTTTATACTGCCTTCTG
TGAGCGTATGGTAAGAAACACTTTCGTCTATGAATCCGAATTATCATAAT
TGGAAGCGAAATTGAATATACCAAGCAATTCATTTGACTTGCATTTGATG
TCGGTTAAGGTCTGCAAACGTTTTTGTCAGCTTCTTTATGTTGCCCGGTA
TCTAAGATTAATAGAAGTTTTCAAGAACTTGATTTTTATTTTTAGTTCTT
TTTTTACGTTTAGGCAGATCAGCTTTCAAAATTATTCCGTTGCTTGCCAC
AAGTGTTGGATCCAGCTGATATAAACCAATCAAATGCAACTTGGGGGTAC
CATCTTTAACCTTTCTATCTTCACAATTGCTACAAATGCTACCAGTATAC
TGACTATTCCACTCAAAAGATTTCTAACGCTCTCTATCTCTTTTGTCCTT
TTTTCTTTTTTCACTTCTTAGTTAAGGATATTTTGAACTCGTATATATTT
AATACATTTCGTTGTTTATTGTATAGGTTCGACCATGATGATCAATATGG
GACAGATTTTCTTGGCAAACGCCAATTGACAGCTTTTCTATCATGGCTTG
ACTATGTCAATCAATTGAGTATTGAAGCTCACCCGGTATGAATTCAAATG
ATGCTTAATGACTTGATTTCAAACAGATTGTATCGATTTGCGGCTAGGCT
ACACTGCTGAACGCTCTTATGCTAGTTTTGGTAGCTTGTGTAACAACTTT
TTTGTCTCTTTCAATTTATTCATATCAAAATAATGAAAACAACTCAGCTT
TGTCTTTGATCTTCAATCTTGTAAAATGTCTGCACTTCTTGATAATCATT
AATTTAATGTTTTATTTTTTTCCTTTATTCTACTTCTTTCAGATGGTCTC
GAAATCTCTTGCACAAGCTATACGTGAAAGATTCATTTTGACTGCCATCG
ATTCTGGCCTTTCTCAAGCGTAAGTTTTTTAGATTTCTAAATCAAGTGTT
ACCCACAAAAAAGACATTGAAGTGTTAGAAATTTGCCTAACGTCAATCAG
CGCTACATATCACAAATATGCAAGGAAAAGTAGATGAGCTGTAGACGAGT
AAACGCAAGGGTACTACTACTTTCAAAAAAAACTCTCAAAAGTTTTCCTT
GGCTGAGATTGAGAAAAATCCTTCCGGGGTTTATAAAAAGCTCAGTGTGT
AGATCTGTTTTCCGTTTTTAGGTCAGAGCCGTGTGCAATCACTGTAACAG
CTATATTGACGCGTTGCTTGAAACTTGTGTCTTCACCAACTTTAGCACAA
GGTAAGATTTATAACTAGAGGGTGAAATAGTAAGGAAATCGCTCATAACA
TTCACTATTTTTGAGGTTATAAGGCATACCTCATTAATGATTTTGAATTT
TTGTCCTTGTAATTGACAATTTCTTTTGAATTATAAGGGTTCTTGATGTT
GAACTACATTAAAATTCTAATCCTTATTTAATCCTATATAAATGTCAATC
TAAATTTTTTTTTTGTTTAGAATTTGCGATAATTCTGCTGGGCAACGAGA
TGTCCCCTGAAATACCAGACCATCAAAGTCCTCACAAACTGAGGCGCTTA
TTAATTCAACGGATCAACCATCTATCTGACCAGCTAGCTGTCGAAACATT
AAGACTTTTCCAAGGGTTGTTGAAACTAGCCTATCAACCAATCATCGATA
CGCTAGTCGTTCGAAACTTTCAAACCAGGAATTATTTAGATTTTAGACGA
ATAAAAAGTAAATCTACAACAAGAACTTCATCGATAAGTAGTACTACGTC
ATCAAAGAAAATCGATACTGGAGCTAAATCTGAAACTGCACCTATTATAG
GAATTATAGGAGATACCATTACGGAAGTATCTCCCAAAAACGATGAAAAA
ATTCCAGACACAGAATTTAGTAGTGATACATATGACAATGAATCAACTGA
TTCCAAAGTAGTTGACACCGGGGAGGGAGAACTAAACGCCACAATAGCAA
GCATTGAGAACATTTCTGAAGAAAAATCAAACGAACATATAGAGGCCATT
GTGAATGAAACGAGTAGTTCAAATATTATAAACACCTCATCTGAGCAAAC
AGCTGAGAATACTTCCGATGAAGCATCCCCTTTAAAAGTTGACAACTCTA
ATAATAATACTCGATCAGTCGAAACAATGGAGACTGGAGAAGAAAATAAC
AGTCAAGACACAGCACAAATTACAGAACAAAATGAAAATACAGAACTAAA
AAGCACCAGCGAGACTGAACAGTCCTTAGACGAATCAGCAGCGAGTTTGC
TCGATCAATCAAACGATTTAGAAGTTGAAGAGGGGATAGATGAA Coding sequence (CDS) from alignment at sc0000112_pilon:412593..417786- >XLOC_020203 ID=XLOC_020203|Name=XLOC_020203|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3894bp|location=Sequence derived from alignment at sc0000112_pilon:412593..417786- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCGAAGCAAGAAGATGTTGTCCCGGTTCACCTCAATGCTGTCCAA
TGCGGTGGAAGCAATGAAGCGAAGCAAGAAGATGTTGTCCCGGTTCACCT
CAATGCTGTCCAATGCGGTGGAAGCATTTGCACCAGAGATGACATTACTT
GAACAATTCCGCTATCATTGGAAATGTGTTACACAGTTCTTCTTGGACAC
AGAAGTTTGCACCAGAGATGACATTACTTGAACAATTCCGCTATCATTGG
AAATGTGTTACACAGTTCTTCTTGGACACAGAAGATGAGCGTATTGCAGT
TGAAAACACAACAATACCAAACCATCTGGAGCAAATGATTGAAGTTTTAA
AAATTGAAGAACATGAAAATGGAATATCCAGTGCAATGAGCGTATTGCAG
TTGAAAACACAACAATACCAAACCATCTGGAGCAAATGATTGAAGTTTTA
AAAATTGAAGAACATGAAAATGGAATATCCAGTGCAGGTCCAGCAATGGA
ATTTATGCTACAACACAAAATCTTGGAAACAATGCAAACTCTTGGAAAAG
CTGATGGTCCAGCAATGGAATTTATGCTACAACACAAAATCTTGGAAACA
ATGCAAACTCTTGGAAAAGCTGATTGTCCACCTGGTATGAAGCGATATGT
TTTGATATTTTTTACGAAACTGCTTGGGAAGCTGAAACAAAAGTTGTTGC
CTCACGTCAATGTTCACAAACCAATCAATTGTCCACCTGGTATGAAGCGA
TATGTTTTGATATTTTTTACGAAACTGCTTGGGAAGCTGAAACAAAAGTT
GTTGCCTCACGTCAATGTTCACAAACCAATCAATAAATTGATACGTTGTT
GTGGAAATGTAAAAGCAGGACCCACTGAAACAGAAGAAGTCCAATTTCTA
CTGCAAGTCTCATCAAAACTGAAGCAAGACTCTTATTTGGTTAGCTTCTT
TCTCGAGAAATTGATACGTTGTTGTGGAAATGTAAAAGCAGGACCCACTG
AAACAGAAGAAGTCCAATTTCTACTGCAAGTCTCATCAAAACTGAAGCAA
GACTCTTATTTGGTTAGCTTCTTTCTCGAGAAACCAACAAGTACAGAACA
GGGGGCGTCTCCACCCCTCTCTCCAGGTGGCAGTATGGGTAGTGATCGGG
AGAAACCTGAATATAGCTTGGTAGATTCTCTATTGGTTCTCACTAAAAGT
GAGAAACCAACAAGTACAGAACAGGGGGCGTCTCCACCCCTCTCTCCAGG
TGGCAGTATGGGTAGTGATCGGGAGAAACCTGAATATAGCTTGGTAGATT
CTCTATTGGTTCTCACTAAAAGTGAGGATAGTAGAGTAGCTATCAAAGCC
TGTGAGGGTCTACTGCTGGTGACATCCATATTGGAAGATACTGCAGCCAG
TGTGATTGTGCTTTATACTGCCTTCTGTGAGCGTATGGATAGTAGAGTAG
CTATCAAAGCCTGTGAGGGTCTACTGCTGGTGACATCCATATTGGAAGAT
ACTGCAGCCAGTGTGATTGTGCTTTATACTGCCTTCTGTGAGCGTATGGC
AGATCAGCTTTCAAAATTATTCCGTTGCTTGCCACAAGTGTTGGATCCAG
CTGATATAAACCAATCAAATGCAACTTGGGGGCAGATCAGCTTTCAAAAT
TATTCCGTTGCTTGCCACAAGTGTTGGATCCAGCTGATATAAACCAATCA
AATGCAACTTGGGGGTTCGACCATGATGATCAATATGGGACAGATTTTCT
TGGCAAACGCCAATTGACAGCTTTTCTATCATGGCTTGACTATGTCAATC
AATTGAGTATTGAAGCTCACCCGGTTCGACCATGATGATCAATATGGGAC
AGATTTTCTTGGCAAACGCCAATTGACAGCTTTTCTATCATGGCTTGACT
ATGTCAATCAATTGAGTATTGAAGCTCACCCGATGGTCTCGAAATCTCTT
GCACAAGCTATACGTGAAAGATTCATTTTGACTGCCATCGATTCTGGCCT
TTCTCAAGCATGGTCTCGAAATCTCTTGCACAAGCTATACGTGAAAGATT
CATTTTGACTGCCATCGATTCTGGCCTTTCTCAAGCGTCAGAGCCGTGTG
CAATCACTGTAACAGCTATATTGACGCGTTGCTTGAAACTTGTGTCTTCA
CCAACTTTAGCACAAGGTCAGAGCCGTGTGCAATCACTGTAACAGCTATA
TTGACGCGTTGCTTGAAACTTGTGTCTTCACCAACTTTAGCACAAGAATT
TGCGATAATTCTGCTGGGCAACGAGATGTCCCCTGAAATACCAGACCATC
AAAGTCCTCACAAACTGAGGCGCTTATTAATTCAACGGATCAACCATCTA
TCTGACCAGCTAGCTGTCGAAACATTAAGACTTTTCCAAGGGTTGTTGAA
ACTAGCCTATCAACCAATCATCGATACGCTAGTCGTTCGAAACTTTCAAA
CCAGGAATTATTTAGATTTTAGACGAATAAAAAGTAAATCTACAACAAGA
ACTTCATCGATAAGTAGTACTACGTCATCAAAGAAAATCGATACTGGAGC
TAAATCTGAAACTGCACCTATTATAGGAATTATAGGAGATACCATTACGG
AAGTATCTCCCAAAAACGATGAAAAAATTCCAGACACAGAATTTAGTAGT
GATACATATGACAATGAATCAACTGATTCCAAAGTAGTTGACACCGGGGA
GGGAGAACTAAACGCCACAATAGCAAGCATTGAGAACATTTCTGAAGAAA
AATCAAACGAACATATAGAGGCCATTGTGAATGAAACGAGTAGTTCAAAT
ATTATAAACACCTCATCTGAGCAAACAGCTGAGAATACTTCCGATGAAGC
ATCCCCTTTAAAAGTTGACAACTCTAATAATAATACTCGATCAGTCGAAA
CAATGGAGACTGGAGAAGAAAATAACAGTCAAGACACAGCACAAATTACA
GAACAAAATGAAAATACAGAACTAAAAAGCACCAGCGAGACTGAACAGTC
CTTAGACGAATCAGCAGCGAGTTTGCTCGATCAATCAAACGATTTAGAAG
TTGAAGAGGGGATAGATGAAAATTTGCGATAATTCTGCTGGGCAACGAGA
TGTCCCCTGAAATACCAGACCATCAAAGTCCTCACAAACTGAGGCGCTTA
TTAATTCAACGGATCAACCATCTATCTGACCAGCTAGCTGTCGAAACATT
AAGACTTTTCCAAGGGTTGTTGAAACTAGCCTATCAACCAATCATCGATA
CGCTAGTCGTTCGAAACTTTCAAACCAGGAATTATTTAGATTTTAGACGA
ATAAAAAGTAAATCTACAACAAGAACTTCATCGATAAGTAGTACTACGTC
ATCAAAGAAAATCGATACTGGAGCTAAATCTGAAACTGCACCTATTATAG
GAATTATAGGAGATACCATTACGGAAGTATCTCCCAAAAACGATGAAAAA
ATTCCAGACACAGAATTTAGTAGTGATACATATGACAATGAATCAACTGA
TTCCAAAGTAGTTGACACCGGGGAGGGAGAACTAAACGCCACAATAGCAA
GCATTGAGAACATTTCTGAAGAAAAATCAAACGAACATATAGAGGCCATT
GTGAATGAAACGAGTAGTTCAAATATTATAAACACCTCATCTGAGCAAAC
AGCTGAGAATACTTCCGATGAAGCATCCCCTTTAAAAGTTGACAACTCTA
ATAATAATACTCGATCAGTCGAAACAATGGAGACTGGAGAAGAAAATAAC
AGTCAAGACACAGCACAAATTACAGAACAAAATGAAAATACAGAACTAAA
AAGCACCAGCGAGACTGAACAGTCCTTAGACGAATCAGCAGCGAGTTTGC
TCGATCAATCAAACGATTTAGAAGTTGAAGAGGGGATAGATGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:412593..417786 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1552-1944:394 |
| Aaloc | 1126-1551:823 |
| Aaloc | 1045-1122:1123 |
| Aaloc | 967-1041:1453 |
| Aaloc | 859-966:1818 |
| Aaloc | 775-855:2082 |
| Aaloc | 664-774:2396 |
| Aaloc | 541-663:2689 |
| Aaloc | 418-540:3366 |
| Aaloc | 313-417:3747 |
| Aaloc | 244-312:4074 |
| Aaloc | 145-243:4496 |
| Aaloc | 64-141:4893 |
| Aaloc | 1-63:5195 |
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